Scleropages formosus (Asian bonytongue): 108938462
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Entry
108938462 CDS
T04919
Symbol
cdk7
Name
(RefSeq) cyclin-dependent kinase 7 isoform X1
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03022
Basal transcription factors
sfm03420
Nucleotide excision repair
sfm04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108938462 (cdk7)
09124 Replication and repair
03420 Nucleotide excision repair
108938462 (cdk7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108938462 (cdk7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sfm01001
]
108938462 (cdk7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfm03021
]
108938462 (cdk7)
03019 Messenger RNA biogenesis [BR:
sfm03019
]
108938462 (cdk7)
03400 DNA repair and recombination proteins [BR:
sfm03400
]
108938462 (cdk7)
Enzymes [BR:
sfm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
108938462 (cdk7)
2.7.11.23 [RNA-polymerase]-subunit kinase
108938462 (cdk7)
Protein kinases [BR:
sfm01001
]
Serine/threonine kinases: CMGC group
CDK family
108938462 (cdk7)
Transcription machinery [BR:
sfm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
108938462 (cdk7)
Messenger RNA biogenesis [BR:
sfm03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
108938462 (cdk7)
DNA repair and recombination proteins [BR:
sfm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
108938462 (cdk7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Seadorna_VP7
ABC1
Kinase-like
Haspin_kinase
APH
Motif
Other DBs
NCBI-GeneID:
108938462
NCBI-ProteinID:
XP_018614538
UniProt:
A0A8C9RBJ8
LinkDB
All DBs
Position
17:16036552..16046698
Genome browser
AA seq
349 aa
AA seq
DB search
MVVIMAVDAKSRTKRYEKLDFLGEGQFATVYKARDKTTNTIVAIKKIKVGHRTEAKDGIN
RTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDYMETDLEVIIKDTSLVLTPANIKA
YILMTLQGLEYMHQHWILHRDLKPNNLLLDENGVLKLADFGLAKAFGSPNRVYTHQVVTR
WYRSPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTKIFEALGTPTEET
WPGLTSLPDYVSFKLFPGTPLENIFSAASDDLLELLRGLFTFNPCTRITATQALKKSYFS
NRPGPTPGPQLPRPNSSIEALKEKENLIIGVKRKRDAIQQGTLKKKLIF
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgataatggcggttgatgcgaagtctagaacaaaacgatacgaaaagttggat
tttctgggcgagggtcagtttgccacagtatacaaagccagagataagactacaaatacc
atagttgctattaagaagatcaaagttggtcacagaacagaggccaaggatggcattaac
agaacagcccttcgagaaatcaagttgctgcaagaactaagtcaccccaacataatagga
ctcctggatgcatttggacacaaatccaacatcagtttggtgtttgactacatggagacg
gatctcgaggtgatcattaaagacacgagcctggtgctgacaccagctaacatcaaggct
tacatcttgatgactctacagggtctggagtacatgcatcaacactggatattacacagg
gacttgaagcccaataaccttctgctggatgagaacggggttctaaagcttgctgacttt
ggtctggcaaaagcatttggaagcccaaaccgtgtttatacacatcaggttgttacaagg
tggtatcggtcccctgagctgctctttggggccaggatgtacggagttggtgtcgacatg
tgggctgttgggtgtatccttgcagagctactgctcagggtaccattcctccctggagat
tctgatctggatcaactgacaaaaatatttgaggctttgggcacaccaacagaagaaact
tggcctggcttgaccagccttccggactatgtgtctttcaaactgttccctggtacgccg
ctggagaacattttcagcgctgccagtgatgacctgctggagctgctgcgtggcctgttc
acctttaacccctgcacacgcatcacagctacacaggccttgaagaagagctatttcagc
aacagacctggccctactcctggtccccagctgccccggcccaactcttccatcgaggcc
ttgaaggagaaggagaaccttatcattggcgtgaagaggaaacgagatgctatacaacag
ggtaccttgaagaagaaattgattttctga
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