Scleropages formosus (Asian bonytongue): 108938580
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Entry
108938580 CDS
T04919
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108938580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfm03021
]
108938580
03036 Chromosome and associated proteins [BR:
sfm03036
]
108938580
Transcription machinery [BR:
sfm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108938580
Chromosome and associated proteins [BR:
sfm03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
108938580
Chromatin remodeling factors
BAF complex
108938580
PBAF complex
108938580
GBAF(ncBAF) complex
108938580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
108938580
NCBI-ProteinID:
XP_018614751
UniProt:
A0A8C9W7F1
LinkDB
All DBs
Position
17:6927182..6956511
Genome browser
AA seq
1587 aa
AA seq
DB search
MSTPTDPSGGMSHPGPSPGPGLSPGPILGPSPGPGPSPSSVHSMMGPSPGPPSVPHSMPG
QGAGDYQPDSMHQMHKPMEGIHDKGMAEDMHFSQMKSMGMRSLHSGMGPSQSPMDQHSQG
YMSPHPSPIGVPEHASSPMSGGGPTPPQMPPSQSASMMPMDPQAMNQQGRGPSAFSPVQL
QQLRAQILAYKILGRGQPLPENLQLAVQGKRSLPTMQQQPVSTPYNRPPGMPMHPMGGPP
AGPCPSSGMQGHTSSAGSKPWQEMPSADAPSTPQKLPVPAATGRPSPAPPQATPVPPPMP
STSVTPQTLGQPSPIVQLQQKQNRITPIQKPQGLDPVEILQEREYRLQARIAHRIQELEN
LPGSLPPDLRTKATVELKALRLLNFQRQLRQDVVACMRRDTTLETALNSKAYKRSKRQTL
REARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSITGKIQKLSKAIATW
HTNTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTEL
VYEHKAAQAAKEKKKKRRKKKKVDENPDGLGAIGPDGEPMDESSQMSELPVKVIQTETGK
VLQGTDAPKSSQLEAWLEMNPGYEVAPRSDSEESGSDFEEEDEEEAVSRAESEEKKIIDP
NSDEVSEDTAKHIIESAKQDVDDEYNVQTGDKSSQSYYGVAHAVTERVEKQSSLLINGTL
KQYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLST
LSNWVYELDKWAPSVVKIAYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIR
WKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFK
SCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY
VIKCDMSAIQKVLYRHMQGKGILLTDGSEKDKKGKGGAKTLMNTIMQLKKICNHPYMFQH
IEESFAEHLGYPNGIINGPDLYRASGKFELLDRILPKLQATNHRVLLFCQMTSLMTIMED
YFAYRNFLYLRLDGTTKSEDRAALLKKFNEKGSQYFIFLLSTRAGGLGLNLQAADTVVIF
DSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMF
DQKSSSHERRAFLQAILEHEEQNEDEEKGQMIMEEDEVPDDETLNQMIARNEEEFELFMR
IDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRHRRDVD
YSDALTEKQWLRAIEDGNLEEMEEEIRLKKRKRKRHMDKDSGKEDGEKAKKRRGRPPAEK
LSPNPPKLTKQMNAIVDTVINYKDGSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIK
ERVRNHKYRSVGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEDESE
DESAYDDDEDEDSESECKTTAKSMKVKIKLGKKDERSFEKGRKQHGRAKAKPVVSDDDTE
DDQDDNFYRRKINPRELGAMMVEEEGS
NT seq
4764 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactcctacggacccatcgggtggaatgtcgcaccctgggccttcccctggacca
ggcctctctcctggaccaattctgggtcccagtcctggtcctggcccgtctccgagttca
gtacacagcatgatgggccccagtccaggcccgcccagtgtgccccacagcatgccaggc
caaggagcaggagattaccagccggacagcatgcatcagatgcacaagccaatggaaggt
atacatgacaaaggcatggcagaggacatgcatttcagccagatgaagagtatggggatg
aggtctcttcacagtggaatgggtccctctcagagtcccatggatcagcacagtcaaggt
tatatgtctcctcatccttctccaattggagtcccagaacatgcctccagtcccatgtca
ggagggggtccgacgccaccccagatgcccccatctcagtctgcatctatgatgcctatg
gatccccaagcaatgaatcaacaggggcgtggcccctctgctttcagtcctgtccagctg
cagcagctaagagcccagattctggcctataagatcttgggccgtgggcagccacttcca
gagaacttacaactggcagtgcagggcaagcggagcctgccaaccatgcaacagcagcca
gtgagcaccccttacaacaggcctccaggtatgccgatgcatcccatgggtggaccccct
gcaggtccatgtccctcctctggaatgcaaggtcacacatcaagtgcaggctcaaaaccc
tggcaagaaatgccaagtgctgatgctccaagcacacctcagaagctccctgttcctgct
gctaccggaaggccttctcctgccccccctcaggccacacctgtgcccccacccatgccc
agcacttctgtaactccacaaactctgggtcagccttcccctatcgtccagctgcagcag
aagcagaaccgtatcacaccaattcagaagccacagggactggacccagtagagattctt
caggaaagagagtacaggcttcaggctagaattgctcacagaatacaggagctggagaat
ttgcctggttccttgcccccagacctgaggacaaaagcaaccgtggaattaaaggcctta
agactgcttaacttccagcgacagctgaggcaggatgtggtggcctgcatgcgcagggac
accaccctggagacggccctcaactccaaggcctacaagcgcagcaagcggcagaccctg
agggaggcccgcatgactgagaaactggagaagcagcagaagattgaacaagagcgaaag
cgccgacaaaagcaccaggaataccttaacagcatattacaacatgctaaagatttcaag
gaatatcatcgatcaattacggggaaaattcagaagctttcaaaagccattgccacttgg
cataccaacacagagagggagcagaagaaggagactgagaggattgagaaagagcgaatg
agaaggctgatggctgaagatgaagaagggtatcgtaaactaattgaccagaagaaggac
aaacgtctggcttacctgctgcagcagaccgatgaatatgtggccaaccttactgagctg
gtttatgaacataaggctgcacaggctgctaaggagaagaaaaagaagagaaggaagaag
aaaaaagttgatgagaatccagatggacttggagccatcgggcccgatggagagccaatg
gatgaaagcagccagatgagtgagcttccagttaaggtcattcagactgagacaggcaaa
gtgctgcagggcacagatgcacccaagtcgagtcagctggaggcctggctggagatgaat
cctggttatgaagttgccccacggtcagacagtgaagaaagtggttctgattttgaagaa
gaggatgaggaagaagcggtttcccgggctgaatcggaggaaaagaagattattgatcca
aacagtgatgaggtgtcagaggatactgcaaagcatatcattgagtctgccaagcaggac
gtggatgatgagtacaacgttcagactggggataagtcctcacagtcgtactatggagtt
gcccatgctgttacagaaagagttgaaaaacagtcctctcttcttatcaatggaacgctg
aagcagtatcagattcagggactggaatggatggtatctctgtacaacaacaatctcaat
gggattctggctgatgaaatgggcctgggaaagacaatccagaccattgccctgatcacc
tacttgatggaacacaagcgcctcaatgggccttacctgatcattgtcccattgtcgacg
ttgtctaactgggtgtatgagctggataagtgggcaccatctgtggtcaaaattgcctat
aagggaacaccagccatgcgaaggtcacttgtcccacaactgcgcagtgggaagttcaat
gttctcctcactacgtatgagtacattatcaaagacaaacatattcttgccaagatacgt
tggaagtatatgattgtggacgagggacaccgcatgaagaatcatcactgtaaattgact
caggtgctcaacactcattatgtggccccacggcgcctgctcttgacggggactccgtta
cagaacaaactccctgagctttgggctttactcaacttcctcctcccaaccatcttcaag
agttgcagcacctttgagcagtggttcaatgctccctttgccatgactggggaaagggtg
gacttgaatgaagaggaaaccattctcatcattcgccgtttacacaaggtgctcaggcct
ttcctgctacgtaggctgaagaaggaggtagaatcccagctgccagagaaagtcgagtat
gtcatcaaatgtgacatgtcagctatacagaaggttctgtaccgtcatatgcaagggaaa
ggcatccttctcaccgatggctcagagaaagacaaaaagggcaaaggaggagcaaaaacc
ctgatgaacactattatgcagctcaagaaaatctgcaaccatccctatatgttccagcac
atagaggaatcatttgcagagcatttggggtaccccaatggtatcatcaatggacctgat
ctttacagagcgtcaggaaaatttgagttactggatcgcattctgcctaaacttcaagca
acaaaccacagagttctgctcttctgccagatgacttcacttatgaccataatggaggac
tactttgcctaccgcaatttcctctacctgcgattggatggcacaactaagtcagaggat
cgtgcagccttgctcaagaagttcaatgaaaaaggatctcagtactttatcttcctgttg
agcaccagagcggggggtcttggtctgaacctccaggctgctgacactgtggtgatcttt
gacagtgactggaacccacaccaggatctacaggcgcaagacagggctcaccgtattggg
cagcagaatgaagtgcgagtactgcgtctctgcaccgtcaacagcgtggaggaaaagatc
ttggctgctgccaagtacaagctaaacgtggaccagaaagtcatccaggctggcatgttt
gaccagaagtcctccagccatgaacgccgggctttcctgcaggccatcctggaacacgag
gaacagaatgaggatgaagaaaagggtcagatgattatggaagaagatgaggtccctgat
gatgaaactctcaatcagatgatagcacgtaatgaggaagagtttgaactctttatgcga
atagacatggaccgccgtcgtgaagatgcccgaaaccccaagcgcaagccacgtctgatg
gaggaagatgagctaccatcttggatcatcaaagatgatgcagaggtggaacgcctgacc
tgtgaggaagaggaggagaagatctttggacgagggtcgcgtcatcgccgggatgtggac
tacagtgatgccctgacagagaaacagtggctacgggctattgaggatggtaacctggaa
gaaatggaagaggaaatccgactcaagaagcgaaaacgaaaaagacacatggataaagat
tctggaaaggaggatggggagaaggcaaagaagaggaggggtcgaccacctgccgaaaag
ctgtctcccaaccccccaaaacttaccaaacagatgaatgcaattgttgacacagtgata
aactacaaggatgggtcaggtcgacagctcagcgaagttttcatccagttgccctccagg
aaagaattgccagaatactatgagttaatcaggaagcctgtagattttaagaagattaag
gaacgtgtacgtaaccacaaatacaggagtgtgggtgacctggaaaaagacgtcatgctt
ctttgtcacaatgctcagaccttcaatttggagggatcccagatctatgaggattccata
gttctccagtcagtattcaaaagtgcccgacagaaaattgctaaggaggacgagagtgaa
gatgagagtgcctacgacgacgacgaagatgaggactctgagtccgagtgtaagacaaca
gcaaagtctatgaaagtgaaaatcaagcttggcaagaaggatgagaggagctttgaaaag
ggacggaaacagcacggtcgggcaaaggccaagccggtggtgagcgacgatgacactgaa
gatgaccaggatgataatttctacagaagaaagatcaatccgagggaattgggagcgatg
atggttgaagaagaggggagctga
DBGET
integrated database retrieval system
