Scleropages formosus (Asian bonytongue): 108938700
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Entry
108938700 CDS
T04919
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm02010
ABC transporters
sfm04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108938700
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108938700
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfm02000
]
108938700
Transporters [BR:
sfm02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
108938700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
AAA_15
MukB
Motif
Other DBs
NCBI-GeneID:
108938700
NCBI-ProteinID:
XP_029107729
LinkDB
All DBs
Position
5:11184360..11299749
Genome browser
AA seq
2179 aa
AA seq
DB search
MGLLAQLGLLLWKNFLLRRRQKVRLLIELIWPLFLFFILVWVRSTNPPIYQGQCHYPNKA
MPSAGVLPWLQGMMCNMENPCVNHPTPGETPGQVNNFNSSLISGVLQELPSFIMDASVLN
KYQQLSEDMQQWLRFARSPSPIHGQSVPPRSLSKDNESFATYLTRNLSVPDAAAERMSTG
VRFSQLSRLLRSPLGDAAAAPDLRSDALGSLSLLLCGTNAETNSSGTSRPASALHANGTK
SSMSPMHLGDGNGNSTAFCQVLNASLQNVPALRYVWKTFRPLLQGKVVYTPDTPATRIII
KEANATFQALGLFNELLDMWERQSPKLWDFLQDSHHMDSLRALLGNPVFAAALNQQLSGT
KWTAETLAHFLYNGPPEERPPGMPNYDWRDALNDTDQVLRMLAQFVTCLDLDKFEPVPSE
GHLVERSRKLIEENRFWAGIVFLDIDPQASLPPPFIKYKIRMDIEEVERSNKIKDRLWSP
GARDHPFNELRYVLGGFVYLQDMLDGGIIRAHTSKEQPLGIFVQQMPYPCYVNDAFTPSI
GGILPMFLVLAFMYSVSAIIKGLVLEKELQLKEVLRAVGVRSGTLWCSQFIENVVLLAVP
CALISVMVKYGKVLQYSDPSVIFVFLLTFCVSTIMECFFISVFFSRANLAAACGGLIYFV
LYLPHILCYAWRDVLSFRVKVLASLLSSVAFGFGCENFSKYEEQGVGIQWNNIFRSPEDD
ERYSFIVSIIMMLVDSFIYWVLTWYIENVFPGRYGIPKPWYFPFTTSYWCGTPAAVSDDF
GMLREPWENSAYLEKAPPGASVGVSIRNLVKVYKTGKKVAVDGLSVDFYQDQITSFLGHN
GAGKTTTMSILTGLFPPTSGTAFINGKDIRSDMDAIRKQLGMCPQHNVLYNDLTVEEHIY
FYARLKGRGSGDVKAEMEQMIKDVGLPHKRKDLAKNLSGGMQRKLSVAIAFVGGSNIIIL
DEPTAGVDPYARRGIWELLLKYKQGRTIILSTHHMDEADILGDRIAIISHGKLCCCGSSL
FLKKCFGSGYYLTLVCARVERNLTQHRTLPQSQTVENSVPEGNVWRNDGVDEEDADEGVR
NQSTGSADLSGCVSGVNAITRLLQRHVPGSVFLECIGQEVTYILPYAAAHDGSFALLLKE
LDLEMGNLGVASYGVSDTTLEEIFLKVAEDTGVDVEKADKQDSFVRDWKRSSREDKRHSI
GSVREHRDSSASHSGTTSPSPKHVCVMXVRGKFANKVEDVEKAGGASGKGSYVIGGWRLI
RRQFMALIIKRFHYARRSRKGLIAQVVLPAVFVCLSLIFSLIVPPFLEYPSLELQPWMYG
VPQNTFFSDDAPGHVEAARVVDSLVNRPGFGTRCMAQNPLPKLPCASNGSDWFTPSVPPS
VSDIFANGNWTMACPSPSCQCSTPSRTTILPDCPLGAGGLPPPQRLQNTTDTLQNLTGRN
MTDFLLKTYEKSGKIRYGGISVGGVNSQVRMNETEIAALFKKLGTLLNASQGSEMEQMLQ
GAETVAKRLGRKDNVKVWFYNQGWHAIVSFINVANNAILRANLPPGLDPTTYGISASNHP
LNLTKEQLSYVAMATTSTDVVVSICVIFAMSFIPASFVLFLIQERVSKAKHLQFVSGVNP
TVYWLANFAWDMCNYIVPCLIVILIFLAFQQKAYVSPANLPALVLLLILYGWSITPMMYP
ASFVFSVPSTAYVVLTSINLFIGINGSVATFVMELFDDKNVSHINDIVKQVLLIFPHFCL
GRGLIDMARNQAMATLYLNFGEDRFQDPLSWTMVGKNLCAMALEGTVMFAVTLLIQYKFF
FKPRQVAANQQAMGPEDADVAAERNRVHQGGAHSDLLRICDLTKAYRRKKRPAVDRICVG
VPAAECFGLLGVNGAGKTTTFKMLTGDIPMTGGEAFLNGYSIRTQMADVHQNMGYCPQFD
AIDELLTGREHLELYARLRGVPEKDVKMVAEWGIRKLGLAKYSNKSAGTYSGGNKRKLST
AMALIGCPPVVFLDEPTTGMDPKARRFLWNCILSVIKEGRSVVLTSHSMEECEALCTRMA
IMVNGRFKCLGSIQHLKNRFGDGYTVMVRVGGNPPALGPVEDFVWNTFPGSVLKEKHHNT
LQFQLPHGEGALASIFRQFTSHREQLEIEDYSVSQTTLDQVFVNFAQHQHEEEDTYVYTN
QEDVTADEVPMKTVPAVHA
NT seq
6540 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctggcgcagttgggtctcctgctgtggaagaactttctcctcagacgaaga
caaaaggtgcgtctactcatcgagctcatctggcccctcttcctcttcttcatcctggtg
tgggtgcgctcgaccaacccgcccatctaccagggacaatgccattaccctaacaaagcc
atgccgtcggcgggcgtgttgccatggctacagggcatgatgtgcaacatggagaacccc
tgtgtgaaccatcccactccgggagaaacacccggccaggtcaacaacttcaattcatcg
ctgatcagcggggtgctgcaggagctcccctcattcataatggatgcgtccgtccttaac
aaataccagcagctctcagaggacatgcagcagtggctgcggttcgcgcgcagtcccagc
cctattcacggtcaatccgttcctccgaggagcctttcgaaggacaacgagtcgttcgcc
acctacctgacgagaaatctctcggttccagatgctgctgcagagagaatgtccacaggg
gtccgtttcagccagctctcccggctcctgcgctctccgctgggggacgcggctgctgcg
ccggacctgaggagcgatgctctcggcagcctgagcctgctgctctgcgggacaaatgca
gaaactaactcctcgggaacgtctcgacctgcttctgcccttcacgccaacggaacaaag
agcagcatgagcccgatgcaccttggagacggaaacggaaattcaactgccttctgccag
gtccttaatgcttccctgcagaatgttcccgcactccgctatgtgtggaagacatttcgc
cccctgctgcaggggaaggtggtctacacaccagacactccagcaacacggataatcata
aaggaggcgaacgccacgttccaggcgttgggtttgttcaacgagctgctggacatgtgg
gaaagacagagtccaaagctgtgggatttcctgcaggacagccaccacatggactcctta
cgggcgctgctgggaaaccccgtgtttgccgccgccctgaaccagcagctgagcggaaca
aagtggacggcggagacactggcccacttcctgtacaatggccctcctgaggagcgcccc
cccggcatgccgaactacgactggcgggacgccctcaacgacaccgatcaagtgctgcgg
atgctggcacagtttgtgacgtgccttgacctggacaagtttgaacctgtgcccagcgaa
ggccacctggtggagagatccaggaaactcatcgaggagaacaggttttgggcaggaatt
gttttcctggacattgaccctcaagcaagcctccctcctcctttcataaaatacaaaata
agaatggacattgaggaagttgagaggtccaataaaattaaggacaggctgtggtcccct
ggagcccgagaccaccccttcaatgaactgcgatacgtgctcgggggcttcgtctacctg
caggacatgctggatggcggcatcatccgcgcgcacacgtccaaggagcagcccctcggc
atctttgtccagcagatgccgtatccgtgctacgtgaatgatgccttcacccccagcatc
gggggcatcctgcctatgttcctcgtgctggccttcatgtactcggtgtccgccatcatc
aagggcctcgtgctggagaaggagctgcagctcaaagaggtgctgcgggcggtgggtgtg
cgcagcggcaccctctggtgctcccagttcatcgagaacgtggtgctgctcgccgtgccg
tgcgcgctcattagcgtcatggtgaagtacgggaaggtcctgcagtacagcgacccttcg
gtcatcttcgtcttcctgctgaccttctgcgtttccaccatcatggagtgcttcttcatc
agcgtcttcttctccagggccaacctggccgcagcgtgcggcggcctcatctactttgtg
ctctacctgccacacatcctgtgctatgcctggcgcgacgtcctcagcttccgcgtcaaa
gtgctcgcgagcctcctttccagcgtggcgttcggctttgggtgcgagaacttctccaag
tacgaagagcagggcgtgggcatccagtggaacaacattttcaggagtcccgaggacgac
gagcgctacagtttcattgtctccatcatcatgatgctcgtcgactccttcatctactgg
gtgctcacatggtacattgagaacgtgttcccaggcagatacggaatccccaaaccatgg
tatttccctttcactacctcctactggtgcgggacgcctgctgcggtcagcgatgacttt
gggatgctgagggagccctgggagaacagcgcgtacctagaaaaggctcccccaggagca
agtgtgggtgtctccatcaggaacctcgtgaaagtatacaagactgggaagaaggtggcc
gtcgatggcctcagtgtggacttttaccaggaccagataacctccttccttggacataat
ggagccgggaaaacaacaacaatgtccattctcactgggctttttccgccgacatcagga
acggctttcataaacggaaaagatatccgcagcgacatggatgccatcaggaaacagctg
ggaatgtgtccccagcacaatgtcttgtacaatgacctgactgtagaagagcacatctac
ttctacgcgcggctcaaaggccgcggttcgggcgacgtcaaggccgagatggagcagatg
attaaagacgtcgggttgcctcacaagaggaaagatctcgccaagaacctgtcggggggc
atgcagaggaagctctcggtagccattgcttttgtgggcgggtccaacatcatcatcctg
gacgagccgacggcaggagtggacccgtacgcccgccgcggaatttgggagctcttactg
aagtacaaacaaggccgcaccatcatcctctccacccatcatatggatgaggcggatatc
cttggagatcgcatcgccatcatctcccacggcaaactctgctgctgcggctcctctctt
ttcctcaagaagtgctttggaagcgggtattacctcactctggtctgtgccagagtggag
aggaatttgactcagcacaggaccctcccacagagccagacggtggagaacagtgttcct
gagggaaatgtgtggcggaacgacggcgtggatgaagaagacgcggacgagggcgtccgc
aaccagagcaccggcagcgccgatctctcagggtgcgtctcgggagtgaacgccatcacc
cggctactccaaaggcacgtacccgggtccgtcttcctggagtgcatcggccaggaggtg
acctacatcctgccgtacgctgcagctcacgatggctccttcgccctgctgctcaaggag
ctggacttggagatgggcaacctgggcgtggcaagctacggcgtctcggacaccacgctg
gaggagatattcctaaaagtggccgaagacacaggagtggatgtggaaaaagcagacaaa
caggattcctttgtcagagactggaagagaagttcaagagaagacaaacgtcacagcata
ggcagcgtgcgagagcacagggactcgtctgcgtcccacagcggtaccacctcaccttcg
ccgaaacatgtctgcgtgatgtaggtgagagggaagttcgcaaacaaagtcgaagacgtg
gagaaggcaggcggggccagtgggaagggctcctatgtcatcgggggctggagactcatc
aggaggcagttcatggccctgatcatcaagaggttccactacgccaggaggagtcgcaag
ggcctcatcgcccaggtggtccttcccgctgtcttcgtctgtttgtctctcatcttctcg
ctcatcgtccctccattcctggagtatcccagccttgaactgcagccctggatgtacggt
gtcccacagaacaccttcttcagtgacgacgcccctggccacgtggaagccgcaagggtg
gtggactccctggtgaatcggcctgggttcggcacgcgctgcatggcccagaaccccctg
ccgaagctgccctgtgcctccaacggctcggactggttcaccccatcggttcctccctcc
gtgtcggacatctttgccaacggcaactggacgatggcctgtccttctccatcctgtcag
tgcagcaccccaagcagaaccaccattcttcctgactgccccctgggggctgggggcctc
cctccgcctcagagactgcagaacaccacagacaccctccagaacctgactgggagaaac
atgaccgacttcctcttgaagacgtacgagaaatcgggcaaaataaggtacggcgggatc
tctgtcggaggggtcaactcacaggtccggatgaacgagacggaaatcgccgcccttttc
aaaaagctcgggactctccttaacgcctcccagggaagtgaaatggaacagatgctccag
ggtgcagagaccgttgcaaagcgcctcggaagaaaggacaatgtcaaggtgtggttctac
aatcaagggtggcatgctatcgtctcattcatcaacgtggccaataacgccatcctgcgt
gccaacctccctcccggactcgaccccacaacctacggcatctccgcttccaaccatcca
ctgaacctgaccaaggagcagctttcctacgtcgctatggccactacctccactgacgtg
gtggtgtccatctgcgtgatcttcgccatgtccttcatccctgctagcttcgtgctcttc
ctcatccaggagcgcgtgagcaaggccaagcacctgcagttcgtgagcggagtcaacccg
accgtctactggctcgccaactttgcctgggacatgtgtaactacatcgtcccatgtctg
attgtgatcctcatcttccttgcgttccaacaaaaagcctacgtctcccctgccaacctg
cccgccctggtcctcctgctcatcctctacggctggtccatcaccccgatgatgtacccg
gcatcatttgtgttcagtgtcccgagcactgcctacgtggtcctaacctccatcaacctc
ttcatcggcatcaacggcagcgtggccaccttcgtcatggagctcttcgacgacaagaac
gtgtcccatatcaacgacatcgtgaagcaggtgctgctgatcttcccacacttctgcctg
gggaggggactcatcgatatggccaggaaccaggccatggccactctgtacctcaacttc
ggagaagaccgtttccaggatccactcagctggaccatggtgggcaagaacctctgtgct
atggcccttgagggaactgtgatgtttgccgtgactctgctcatccagtacaagttcttc
ttcaaacccagacaggtggcggcaaaccagcaagcgatgggtccggaggatgcagatgtg
gctgctgagcgcaatcgcgtgcatcagggtggagcccacagcgacctgctgagaatctgt
gatctcacaaaggcgtatcggagaaagaagaggcctgctgtggaccggatctgcgtggga
gtccctgccgcagagtgttttggcctgttgggcgtcaatggagcaggaaaaaccaccacg
ttcaagatgctgacaggtgacatcccaatgaccggtggagaagccttcctgaacggatac
agcatccgcacgcagatggccgatgtccaccagaacatgggctactgcccgcagtttgat
gccatcgacgagctgctgacgggccgcgagcacctggagctgtacgcccgtctccgcggg
gtgcccgagaaggacgtcaagatggtggcagagtggggcatccgtaagctaggcctcgcg
aagtactccaacaagtctgccggaacctacagcgggggcaataagcgcaagctctccacc
gctatggcactcatcggctgcccaccagtagtcttcctggatgaacccaccacagggatg
gaccccaaagcacgccgattcctgtggaactgcattctgagtgtgatcaaggaagggcgc
tctgtcgtactgacatctcacagcatggaggagtgcgaagctctctgcacacgtatggct
atcatggtcaacgggcggttcaagtgcctcggcagcatccagcacctgaaaaacaggttc
ggggatgggtacacggtcatggttcgggtgggcggaaaccccccggccctaggccccgtc
gaagactttgtgtggaacacgttcccaggaagtgttctgaaggagaaacaccacaacacc
ctgcagttccagctgccacacggagaaggcgccctagccagtatctttcggcagttcacc
agtcaccgggagcagctggaaatagaggactactccgtgtcccagaccactctggaccag
gtctttgtcaactttgcccaacaccagcatgaagaagaggacacctatgtgtacaccaac
caggaggacgtgactgcagacgaagtgccgatgaagaccgttccagcggtgcatgcgtag
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integrated database retrieval system
