Scleropages formosus (Asian bonytongue): 108938711
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Entry
108938711 CDS
T04919
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sfm01002
]
108938711
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfm04121
]
108938711
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfm04147
]
108938711
Enzymes [BR:
sfm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108938711
Peptidases and inhibitors [BR:
sfm01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108938711
Ubiquitin system [BR:
sfm04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108938711
Exosome [BR:
sfm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108938711
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_9
UBA_DHX29
UBA_4
DMFA2_C
Motif
Other DBs
NCBI-GeneID:
108938711
NCBI-ProteinID:
XP_018615074
UniProt:
A0A8C9S7W9
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Position
2:complement(11293650..11331013)
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AA seq
857 aa
AA seq
DB search
MAADLGELLVPYMPTIKVPKTGDRVYKDECVFSFDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQSVYMHLKRTIKEKATGAAGGAVPRRRNGKVFLDLELNCDFNCDDYEYEDEAKL
VIFPDHFEIPLPNIEELPALVTIACDAVLSASSAFRKREPDSWEEEPQVSKHARSLRQQD
NGVRIPPSGWKCAKCEMRENLWLNLTDGSVLCGKWFFDGSGGNGHALEHYRETNFPLAVR
LGTITPDGADVYSFDEEEAVLDPHIAEHLAHFGIDMLQMQKRENGHVDNEVRPRVTEWEV
IQESGLKLKAVYGSGYTGIRNLGNSCYLGTTMQVLFSIPEFQRAYVGNLQRIFDYSPLDP
SQDFSTQMAKLGHGLLSGLYAKPPAKCELIEQVMKEEHKVSDVHQERGISPRMFKALVSK
GHPEFSSNRQQDAQEFFLHIINLVERNSAGAENPSDVFRFLVEERIQCCQSRKVRYTQRV
DYLMQLPTPIEAATNREELIAYEAKRQEAEENLRTSPEPVRAKIPFTACVQAFTEPENVP
DFWSSALQAKSAGIKTSRFASFPEYLVVQIKKFTFGVDWVPKKLDVSIDMPDFLDLSRLR
ATGLQAGEEELPDLTPPIVLPEDTRDSSMTDSPEIDESAVMQLAEMGFPLEACRKAVYYT
GNMGAEMAFNWIIAHMEEPDFAEPLAVPSYSEPGPSSPSQGPSMDSQPPEDSVAILTSMG
FSRAQTIRALKATNSNLERALDWIFTHPDSEEESEAVSDMADTEPNDNAFSNANMNSDST
LSPDLDPTGPRIKDGPGRYELFAFISHMGTSTMSGHYVCHIKKEGRWVIYNDHKVCLSER
PPKDLGYIYFYHRLSCS
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggatctaggcgagctgctggtcccttacatgcccaccatcaaggtgcccaag
acgggagacagggtctacaaggacgagtgcgtcttctccttcgactcgcccgaatctgaa
ggtggcctctatgtgtgcatgaacacgttcttgggcttcggcagagaacatgtggaaagg
cattaccgcaaaaccggccagagcgtttacatgcacctcaagcggaccataaaggagaaa
gccacaggtgctgcaggaggggctgtgccaagaagaaggaatggtaaagttttcctagat
ttagaacttaactgcgattttaactgcgacgattacgaatatgaagatgaagccaagctt
gtcatattcccagaccactttgagatccccttaccaaatattgaggagttgcctgcactg
gtgacaattgcctgcgatgccgtgctcagcgcctcctccgccttcagaaaacgggaaccg
gattcctgggaggaggaaccgcaggtgtcgaagcatgccaggagccttcgacagcaggac
aacggggtgcgaatcccgcccagtggctggaaatgtgccaagtgtgagatgagggagaac
ctgtggctcaaccttacggacggatcagtgctgtgtgggaagtggttcttcgacggtagc
ggaggaaacggacatgctctggagcattacagagaaaccaacttccccctggcagtcaga
ctgggcacaataactccagatggagcagatgtttattcctttgatgaggaggaagctgtc
ctggacccacatatagcggagcatttagcccactttggaatagatatgttacagatgcaa
aagagggagaatggccatgtggacaacgaggtacggccacgggtgactgagtgggaagtg
atccaggagtcgggtctgaagctgaaggcggtgtatggctcgggttacaccggcatcagg
aacttgggtaacagctgctacttggggaccaccatgcaagtcctcttcagcatcccagag
ttccagagggcatacgttgggaatcttcagaggatatttgactattcgcccctagatcct
tcgcaagatttcagtacacagatggcaaagcttggacacggacttctctcaggcctgtac
gccaaacctccggcaaagtgtgagctcatagaacaggtgatgaaagaagaacacaaggta
tcagacgtgcaccaggagagaggtatatctcctcggatgttcaaagctctggtcagcaaa
ggtcatcctgaattctcatccaacagacagcaggatgcccaggagtttttcctacatata
atcaacctagtagagaggaacagcgccggtgcagagaatcccagtgatgtgttccgcttc
ctggtagaggagaggatacagtgttgccagtcgcggaaagtgcgctacacccagagggtg
gactacctcatgcagctccccacccccatcgaggctgccaccaacagggaggagctcata
gcatatgaggcgaaacggcaggaggctgaggagaacctgaggacctcaccagagccagtg
agggccaaaattccattcacagcatgcgtgcaagccttcaccgagcccgaaaatgtgccg
gacttctggagctcggcgttgcaggccaaatcagccgggatcaagacttcccgttttgcc
tcgttccccgagtacttggtggtgcagataaagaagttcacctttggggttgactgggtc
cccaaaaaattggacgtctccatagacatgccggatttcttggatctgtcccggctccgt
gccacgggtttgcaagctggtgaggaggagctgcccgacctcactccacccatcgtcctc
ccagaggacaccagagatagctcaatgacggactctccggaaatagacgagtctgccgtg
atgcagctggcagagatgggctttcccctggaggcgtgtcggaaggccgtgtactacacg
ggcaacatgggggccgagatggccttcaactggatcatcgcccacatggaggagccagac
ttcgcagagcctttagcagtgccttcctactccgaacccgggccttccagccccagccag
ggcccctccatggacagtcagccccctgaggacagcgtggccattctcacatccatgggc
ttctccagggcccaaaccattcgagccctcaaagcaaccaacagtaatctggagcgggca
ctggactggatcttcacccaccccgacagcgaggaggagagcgaggcagtgtccgatatg
gctgacacagagcccaatgacaacgccttctccaacgccaacatgaacagtgactccact
ctgtccccagacctggacccgacaggtcccagaatcaaagatggacctggccgatatgag
ctctttgccttcattagccatatggggacatccacaatgtctggccattacgtttgtcac
atcaagaaggagggaaggtgggtgatttacaacgaccacaaagtctgcctttcggaaaga
cctcccaaagacttgggctacatctacttttatcatcgattgtcctgcagctag
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