Scleropages formosus (Asian bonytongue): 108938927
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Entry
108938927 CDS
T04919
Symbol
rbbp4
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03082
ATP-dependent chromatin remodeling
sfm03083
Polycomb repressive complex
sfm04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108938927 (rbbp4)
03083 Polycomb repressive complex
108938927 (rbbp4)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
108938927 (rbbp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfm03036
]
108938927 (rbbp4)
Chromosome and associated proteins [BR:
sfm03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
108938927 (rbbp4)
Histone modification proteins
HAT complexes
HATB complex
108938927 (rbbp4)
HDAC complexes
Sin3A-HDAC complex
108938927 (rbbp4)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
108938927 (rbbp4)
PRC2.2
108938927 (rbbp4)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
108938927 (rbbp4)
Heterochromatin formation proteins
Other heterochromatin formation proteins
108938927 (rbbp4)
Chromatin remodeling factors
NuRD complex
108938927 (rbbp4)
NuRF complex
108938927 (rbbp4)
NuRF complex (fruit fly)
108938927 (rbbp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_DCAF12
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
eIF2A
Beta-prop_IFT140_1st
MIOS_WD40
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
108938927
NCBI-ProteinID:
XP_018615456
UniProt:
A0A8C9VVL4
LinkDB
All DBs
Position
23:complement(3781539..3787071)
Genome browser
AA seq
424 aa
AA seq
DB search
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
YSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEG
YGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGAADA
EVQG
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaagaagcagcatttgacgatgccgtggaggagagagtcataaatgaagag
tacaagatctggaagaagaacacgcccttcttgtacgacctggtgatgacccacgcgctc
gagtggcccagccttacggcgcagtggctgccggacgtcaccagacccgaggggaaggat
tacagcattcaccgtctggtgcttggcacacacacgtcagatgagcagaatcatctggtc
atcgccagcgtgcagctgcccaacgatgacgcccagtttgatgcctctcactatgacagt
gagaaaggagagtttggtggctttggctcagtgagcgggaagattgaaattgagataaag
atcaaccatgagggcgaggtgaaccgggcccgctacatgcctcagaacccctgcatcatc
gccaccaagactcccacaagcgatgtgctggtgttcgactacaccaagcacccgtcgaag
ccagatccttctggagaatgcaccccagacctacgtttgcgaggacaccagaaggagggc
tatggcctgtcgtggaacccaaaccttagcggctgcctcctcagtgcctctgatgatcat
accatctgcttgtgggatatcagcactgtgccgaaggagggcaaggtggtggatgccaag
accatcttcacgggacacacggccgtggtggaggatgtctcctggcacctactgcatgag
tcgctttttggctctgtggctgatgaccagaagctcatgatctgggacactcgatccaac
aacacctcgaagcccagccacgctgtggacgcccacacggcagaggttaactgcctctcc
ttcaacccgtacagcgagttcattctggccactggctccgcggacaagaccgtggctttg
tgggacctgcggaacctgaaactcaagttacactcctttgagtcccacaaagacgagatc
ttccaagttcagtggtcacctcacaacgagaccattctggcctccagtgggacagacagg
cggctcaacgtttgggacctcagtaaaattggtgaggagcagtcaccagaggatgcagaa
gacggaccaccagaattgctgttcattcacggggggcacacggcaaagatttcggacttc
tcttggaaccctaacgagccctgggtcatctgctccgtgtcggaggataacatcatgcaa
gtctggcaaatggcagagaacatttacaacgatgaagatccagagggggcggccgatgcc
gaggtccagggctga
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