KEGG   Scleropages formosus (Asian bonytongue): 108939086
Entry
108939086         CDS       T04919                                 
Name
(RefSeq) E3 ubiquitin-protein ligase NRDP1
  KO
K11981  E3 ubiquitin-protein ligase NRDP1 [EC:2.3.2.27]
Organism
sfm  Scleropages formosus (Asian bonytongue)
Pathway
sfm04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:sfm00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108939086
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sfm04131]
    108939086
   04121 Ubiquitin system [BR:sfm04121]
    108939086
   03029 Mitochondrial biogenesis [BR:sfm03029]
    108939086
Enzymes [BR:sfm01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108939086
Membrane trafficking [BR:sfm04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    108939086
 Autophagy
  Mitophagy
   PINK1-Parkin associated proteins
    108939086
Ubiquitin system [BR:sfm04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    108939086
Mitochondrial biogenesis [BR:sfm03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-dependent mechanism factors
    108939086
SSDB
Motif
Pfam: USP8_interact zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_6 zf-rbx1 zf-C3HC4_4 zf-Nse Sina_ZnF zf-RING_UBOX zf-C3HC4_3 zf-RING_5 U-box zf-TRAF zf-ANAPC11 DUF641 zf-RING_10 Sos7 LXG Laminin_II SlyX Mis12 zf-TRAF_2 Trimer_CC zf-RING_16 BLOC1_2 ATG14 zinc_ribbon_16
Other DBs
NCBI-GeneID: 108939086
NCBI-ProteinID: XP_018615728
UniProt: A0A0P7VMA1
LinkDB
Position
19:complement(17808861..17824349)
AA seq 318 aa
MGYDVTRFQGEVDEDLLCPICSGVLEEPVQAPHCEHAFCNACITQWFSQQQICPVDRTVV
TLAHLRPVPRIMRNMLSKLQITCDNAVFGCKAVLRLDQLQSHLKDCEHNPKRPVTCEEGC
GLEMPKDELPSHNCIKHLRSVVQQQQSKIAELEKTAAEHKHQLAEQKRDIQLLKAYMRAI
RSANPNLQNLEETIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLIDSGCPL
SIVNDLIENAHERNWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGEDM
ILEPGLVMIFAHGVEEIL
NT seq 957 nt   +upstreamnt  +downstreamnt
atgggctacgacgtcaccaggttccagggggaggtggacgaggacctattgtgccccatc
tgcagtggggtgctggaagagcctgtgcaggcaccccactgtgaacatgccttctgcaat
gcctgcatcactcagtggttctcccagcagcagatctgccctgttgatcgcactgtggtc
acactggctcacctgcgacctgtaccccgcatcatgagaaatatgctgtctaagctgcaa
ataacttgtgacaatgccgtttttggctgcaaggctgtgttgcgcttagaccagctgcag
tcacacctgaaggactgcgagcacaaccctaagaggccagtcacgtgtgaggagggctgt
ggcctcgagatgccgaaggatgagctgccaagtcacaactgcattaaacacctgcgcagt
gtggtgcagcagcagcagtccaagattgccgagctggagaagaccgcagctgagcacaaa
caccagcttgctgagcagaaacgggacatccaacttttaaaggcctacatgagggccata
cgcagtgccaaccccaacctgcagaacctggaggagactattgagtacaatgagatccta
gagtgggtgaactctctccaaccagcccgtgtgacgcgctggggaggcatgatctctact
ccggatgctgtcctccaagcagtgatcaaacgctcgctgattgacagcggctgcccgctg
tctattgtgaacgatcttattgagaatgcacacgagcgcaactggccacaaggcctggcc
acactggagacgcggcagatgaaccgacgctactatgaaaactacgtggcaaaacgcatt
ccgggcaagcaagcagtggtggtgatggcctgcgagaaccagcacatgggcgaggacatg
atcctggagccagggcttgtcatgatctttgctcatggggttgaagaaatactatag

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