Scleropages formosus (Asian bonytongue): 108939557
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Entry
108939557 CDS
T04919
Symbol
kcnma1
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
108939557 (kcnma1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfm04040
]
108939557 (kcnma1)
Ion channels [BR:
sfm04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
108939557 (kcnma1)
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
SR-25
Motif
Other DBs
NCBI-GeneID:
108939557
NCBI-ProteinID:
XP_018616470
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Position
24:20069299..20216496
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AA seq
1288 aa
AA seq
DB search
MLATLDGNGTGSATMSNNINRQKVDFPSVHMSKMDVVIPFSPEVPCDNSNGQRMWWAFLA
SSMVTFFGGLFIILLWRTLKYLWTVCCHCNMKNKEAQKVNNPTGGQTNGTSKNLDEKEPE
ATASEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALVIYFIDSSDPIESCHIFY
KDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLG
LRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPWEN
FQNSQALSYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEIIEL
IGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNL
ELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNIMRVI
SIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQSCLAQGLST
MLANLFSMRSYVKIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPTVCELCYVKLKLLL
IAIEYKSDQRESSTLINPGNHVKMQEGTLGFFIASDAKEVKRAFFYCKACHDDITDPKRI
KKCGCKRLIYSKMSVYKRMRLACCFDCGRSERDCSCMSGSVRSNMDTLQRAFPLSPVSVN
DCPTSLRAFEEEHPSTLSPKKKQRNGGMRSSPNCSPKMMRHDPLLIPGNEQIENMDVNVK
RYDSTGMFHWCPSKDIEKVILTRSEAAMTVLSGHVVVCIFGDVKSALVGLRNLVMPLRAS
NFHYHELKPIVFVGSLEYLKREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILS
ANQNNIDDASLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPDNSPVHGL
PRQASITTGANIPIITELAKPGKLQPMISLSQDKNSGTNIQMITELVNDSNVQFLDQDDD
DDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEGLLAEE
NALRGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYR
LRDAHLSGPSQCTKRYVITNPPYEFELVPSDLIFCLMQFDHNAGQSRTSLSHSSYSSHSS
SKKSSSVHSIPAANRQNRSKARDSREKHNATRMNRMGQEKKWFTDEPENPYSRNIQIKPM
STQMANQVNQCKSTSNLIPPIREVEDEC
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgctagccacgctggacggcaacggcaccggcagcgctaccatgagtaataatatcaac
cgtcagaaggtggactttccctctgtccatatgtccaagatggatgtggttatcccgttc
tcgcctgaggtgccctgtgacaacagcaatggacagcgcatgtggtgggctttcctcgcc
tcctccatggtcactttctttgggggtctcttcatcatcctcctgtggaggaccctcaag
tacctgtggaccgtgtgctgccactgcaacatgaaaaacaaggaagcacagaaggttaat
aatcccacgggtgggcagaccaatgggacctccaagaacctggacgagaaggaacctgag
gccaccgccagcgaagtgggctggatgacatctgtcaaagactgggccggagtcatgata
tcggcacagacgctgactggcagagtactggttgtgctagtgtttgcgctcagcattgga
gcacttgtaatatacttcatagattcttctgaccccatagaatcctgtcacattttctac
aaagatttcacattacagatcgacatggctttcaacgtcttcttcttgttgtactttggt
ctgcgtttcattgcagcaaacgataagctctggttctggctggaggtgaactcggtcgtg
gacttcttcacagttccaccagtgtttgtttccgtctatttaaacaggagttggctcggt
ttgaggtttttaagggccttaagactgatacagttttcagaaattttacaatttttgaat
atcttaaaaacaagtaattccatcaagcttgtgaacttgtgttccatcttcataagcaca
tggctcaccgcagctgggttcatacatttggtggaaaactcaggggatccttgggaaaac
ttccagaattcccaggcactttcctactgggaatgtgtctacttgctcatggtcaccatg
tccactgtgggatacggagatgtttatgcaaaaaccacgctgggacgccttttcatggtc
ttcttcatcctcggtggtttggccatgtttgccagctacgtccctgaaatcatagagtta
ataggaaaccgcaagaaatatggtggttcctatagtgcggttaatgggagaaagcatatt
gtggtctgtggtcatataacacttgaaagtgtttccaacttcctgaaagacttccttcac
aaggacagggatgatgtcaatgtagaaattgtttttctccataatatttcccctaatctt
gagctggaagccttatttaagcgccactttactcaggtggagttttaccaaggatcagtt
ctgaatccacatgacttggccagagtgaagatagagtcagctgatgcttgcttgatcttg
gctaacaaatactgcgcggaccctgatgccgaggatgcctccaacatcatgagagtgatt
tccatcaagaattatcatccgaagatacgaattatcacacagatgttgcagtatcacaac
aaggcccatctgttaaacattcccagctggaactggaaagagggagatgatgcgatttgc
cttgctgagctcaagttgggtttcattgcccaaagctgcctggcccagggtctctccacc
atgcttgcaaacctcttttccatgagatcatacgtcaagattgaagaggatacctggcag
aagtactacctggagggagtagccaatgaaatgtacacagaatacctgtccagtgccttt
gtgggcctgtccttccctacggtttgtgaactgtgttatgtgaagctcaagctgttgttg
atagccatcgagtacaagtctgatcagagggaaagcagcacccttattaacccagggaac
catgttaagatgcaggagggcaccttagggttcttcatagccagcgatgccaaagaagta
aagagggcatttttctactgcaaggcatgtcatgatgacatcaccgatcccaaaaggatt
aaaaagtgtggctgcaaacggctgatatattccaagatgtccgtctacaaacgaatgaga
ctggcatgttgttttgattgcggacgctctgagcgtgactgctcgtgcatgtcaggcagt
gtacgtagtaacatggacacccttcagagagccttcccactttctcctgtctctgttaat
gattgcccaaccagtttacgtgccttcgaagaggagcatccatcaacgctgtcgcctaaa
aaaaagcagcgcaacggaggcatgcgaagttcaccaaactgctcgccaaaaatgatgcgg
catgaccccttgctcattcctggaaatgagcaaattgagaacatggatgtgaatgtgaag
aggtacgattccaccgggatgtttcactggtgcccgtcgaaagacatcgagaaagttatc
ctgacgcggagtgaggctgccatgacggttctgagcggtcacgtggtggtctgtattttc
ggggatgtcaagtctgccttggtggggctgcggaacctggtgatgcctttgagggcgagc
aacttccactaccatgagctgaagcccattgtgttcgtgggctccttggagtatcttaag
cgagagtgggaaacccttcacaatttccccaaagtctccattttacccggtacgccatta
agtcgggctgatttgagggctgtcaacatcaacctctgcgacatgtgcgttatcctgtca
gccaatcagaacaatatcgatgatgcttcactgcaggacaaggaatgcatcttggcatca
ctcaacatcaaatctatgcagtttgatgacagcattggggtcttgcaggctaattcccaa
ggcttcactcctccagggatggacaggtcttccccagataacagtccagttcatggatta
ccacggcaggcctccatcactactggagccaacatcccaatcataactgaactagccaaa
ccgggcaaattgcagcccatgatttcactgagtcaggacaaaaatagtggaaccaacatt
caaatgataactgaactggtgaatgactccaatgttcagttcctggaccaagatgacgac
gacgatccggacacagagctgtacctcacacagccgtttgcgtgcggaactgcgtttgca
gtcagtgtgctggactccctaatgagtgcgacatacttcaatgataatatcctcacgctg
atccggacgctggtaacaggaggagctacaccggagctggagggcctcctggcggaggag
aacgcgctgcggggcggctacagcacgccgcagacgctcgcaaacagggacaggtgtcgg
gttgcgcagctggcgctctacgacgggccctttgcagacttgggggatggcggatgctac
ggtgacctattttgtaaagcattaaaaacttataacatgctgtgcttcggaatttaccga
ttacgagacgctcatctgagtgggccgagccagtgcacaaaacggtatgtcataacaaac
ccaccgtacgagtttgagctggtgccctcagacctgatcttctgcctgatgcagttcgac
cacaacgcgggccaatcccggaccagcttgtcgcactcgtcctattcctcccactcgtcg
agtaaaaagagctcctctgttcactcgatccccgcggccaaccggcagaaccgcagcaag
gcccgagactccagggagaaacacaatgcaacaaggatgaatagaatgggccaagaaaag
aaatggtttacagatgaaccagaaaatccctactcaaggaacattcaaatcaagcccatg
agcacccaaatggccaatcaagtcaatcaatgtaagtccacaagcaacctgattccacca
atcagagaagttgaagacgaatgctga
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