Scleropages formosus (Asian bonytongue): 108939851
Help
Entry
108939851 CDS
T04919
Symbol
usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sfm01002
]
108939851 (usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfm04121
]
108939851 (usp42)
Enzymes [BR:
sfm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108939851 (usp42)
Peptidases and inhibitors [BR:
sfm01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108939851 (usp42)
Ubiquitin system [BR:
sfm04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108939851 (usp42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
108939851
NCBI-ProteinID:
XP_018617022
LinkDB
All DBs
Position
20:13227311..13244698
Genome browser
AA seq
1243 aa
AA seq
DB search
MTIVDKPSEHSDSESGRPRGCGSLPSFATGDMDGDSASWSVGSSTHDTSKANASCVGLTP
VAPLFSGTSAASGEKPKEQVVMTSGDGIALPQKVLFPADRISLKWNQVHRIGAGLHNLGN
TCFLNSALQCLTYTPPLANYMLSREHSKTCHEPGFCMMCTMQNHVTQVFANSGNVIKPIG
VLNELKRIAKHFRFGSQEDAHEFLRYTVDAMQKSCLPGNKLDRQTQATTFVHQVFGGYLR
SRVKCLNCKAVSDTFDPFLDVALEIKTAPNIIKALEQFVKPEQLDGENAYKCTKCKKMVP
ASKRFTIHRSSNVLTISLKRFANYNGGKIAKDVRYPEYLDIRPFMSQSHGEPLHYLLYAV
LVHSGFSCHAGHYYCYIKASNGQWYQMNDASVTISDIRTVLNQQAYVLFYIRSPDVKNGG
EYNHSNRTPGQTSPHPVLNPRQGGLRNPTTGFIGPQLPPHMAKNHPHINGNSSLKGLSSG
SKPGGSTGLINRTVSSLSSSSITSQLLSRPTGIPEAAKRQKLSFLIGQGKTVRLSQNHPT
LHYKHSCSSSVTSHLQSQTSTSVASSSITTCTSSSSSSSQSTSEYLPATVSRPSLPSGSN
APHVNGTSLNHCATLLVPYGQESSEESDQEGGSLENGFDELHGPPALNGKNMQNISPYTH
NGSVAKESHVQENGSGVSQHVFGPSQNGLYNGIKPIEKVSSTVLGTDSVEHLSPSIDKDG
DVTTSVVETLTTDSALDSQPGNETLFPTVPSSHIHDSTLRGSHKPALECQVSTQGKRAKS
HMDDLTQLAPALSANLCYMSSVSDLKEVPTKLSSMVSETPRVIRTVYHSDAVSSTSFSCS
PNNNILVNHGLSGPGCVSGAAPRVQESTDLSGLKTSELRSTSESDGQLSTLEGKDEFKES
NPVKQKMKDQEVHQTTDCDHLSTSPAKRWDKGPEKHRNHRYRDSYSRKSMDKVRRRDRSK
SKDRRRDRSKSRDRRRDKSGHKNVIRHHTQRERTYREREAERQWERYGHHCRHHWHSEHV
EDRRPGCCRQAEEDRGKGHRNQDGSHSRARHSPQSTLLRERHHRDNSDRRLLKWDRSSQE
RKAKKHKSKKKKERSKHSDRWSSERDTAERNSDDSSRRHKKKKKKKKRRRRHDSTHSSPN
NSSGPSAKEWRCSDDYRSSHKRHHHDGEQSPHPGKRCRSETDPHLPSHPGNEASQLGEIA
HKCLVNGLNVDRNYKHLNSEVSSSHSVGQNTDLGCSKQLPQKT
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaagccatcagaacactctgactctgagtcaggtcggcccaggggt
tgcgggtctctgccctcgtttgccactggagacatggatggtgactctgccagctggagt
gtgggttcctcaactcacgacacctccaaagctaatgcctcttgtgtgggactgaccccc
gtagccccactcttcagtggcacttcagcagcttcaggagagaagccaaaggagcaagtg
gttatgacaagtggggacggcatcgctctcccacagaaggtccttttcccagcagatcga
atcagtctgaagtggaaccaggtccatcgcattggagcaggactccataacttgggcaac
acttgcttcctcaactcggctctccagtgtctcacctacacaccaccactggccaactac
atgctgtcccgggagcattccaaaacttgtcatgagcctggcttctgcatgatgtgcacc
atgcagaaccatgtgacgcaagtcttcgccaactctggaaatgtcataaaacctattggt
gttctaaatgagctaaaacgaattgcaaaacattttcgctttggaagccaggaagatgcc
catgagtttctacggtacacagttgatgctatgcaaaagtcctgcctacctggaaataaa
ttagacaggcaaacccaggcaactacatttgtccatcaagtctttggaggctacttaaga
tcaagagtgaaatgcctaaactgcaaagcggtatctgatacatttgatcctttcctggat
gtagctttggaaataaagactgctccaaacatcatcaaagctcttgagcaatttgttaaa
ccagaacagctggatggagagaatgcctataagtgtacaaagtgtaagaaaatggtacct
gcctcgaagagattcacaattcaccgcagctccaatgtcctgactatttctttgaagcgc
tttgcaaactacaatggaggaaaaattgcaaaagatgttagataccctgagtacttggac
atacgtccattcatgtcccagtctcacggagagcccctgcactacctcctgtatgccgtg
ctagttcactcgggattcagttgccatgctggacactactactgttacatcaaggccagc
aatggacagtggtatcagatgaatgatgcctctgtcactatcagtgatataagaacagtt
ctaaaccagcaagcctatgttctcttttatatcaggtcccctgatgtgaaaaacggaggg
gagtacaaccattccaatcgaacgccaggtcagacctctccacaccctgtcctcaaccct
cggcagggtgggcttcgcaaccccactacaggcttcattgggccacagctaccaccccac
atggccaagaaccatccccacattaatgggaacagctccttgaagggactgtcttctggc
tccaaacctggtggcagcacaggccttatcaacagaacagtctccagcctctcctctagc
tccattacctcgcagcttctcagccgccctactgggatcccggaggctgctaaaaggcag
aaattgagcttcctcattggccagggaaaaacggtccgactctctcaaaaccaccccacg
cttcattataaacacagctgctcatcatctgtgacctcccacctacagtcccaaacctcc
acttctgttgcttcttcctctatcactacttgcacatcctcctcctcctcctcctcacag
tctacctcagaatatctgccagcaacagtatcccggcccagccttccttctggctccaat
gctcctcatgtcaatggcacatctctcaaccactgtgccactctcctggtgccttatggt
caggagtcctctgaagagtctgaccaggagggtggcagcctggagaatggctttgatgag
cttcatggcccccctgcattaaatgggaagaacatgcagaacatttctccctatacacat
aacggttccgtggcaaaggagtcccatgtccaagagaatggttcaggagtttctcagcat
gtctttggaccaagccagaatgggttatataatggcatcaaacccattgagaaggtctct
tccacagtgttgggcacagacagtgttgagcacctatcacctagcattgacaaagatggg
gatgtcaccaccagtgttgtggagacactgaccacagattctgctttagacagccagcct
ggcaatgaaacattgtttcccacagtcccttcatcccacatacatgattctacactgaga
ggcagccacaaacctgctttggagtgccaggtctccactcaaggcaaaagggctaaatct
cacatggatgacctcactcagcttgctcctgctttatctgctaacctttgttatatgtct
agtgtgagtgacctgaaagaagtcccaactaagctatccagtatggtctccgagactcct
agagtcatccgcacagtctatcacagtgatgctgtatcctcaacgtccttcagctgcagc
cccaataacaatattttggtaaaccatggtctgtctggccctgggtgtgtttctggagca
gctcctagggtacaggagtctacagacttgtctggattaaagacctcggaactgaggagt
acttcagaaagtgatggacagctttccacactggagggcaaagatgagtttaaggagtcc
aacccagtcaagcaaaaaatgaaagatcaggaagtacatcagactacagactgtgaccac
ctgtctacatctcctgcaaagaggtgggacaagggtcctgagaaacacaggaaccacagg
tacagggacagttatagtagaaagagtatggacaaggtcaggagaagagaccgaagtaag
agcaaggataggagaagggacaggagtaagagcagggataggagaagagataagtcaggc
cacaagaatgtcatacgccaccatactcaaagggaaaggacctacagggagagggaggca
gagcgccagtgggagcgctatgggcaccactgcaggcaccactggcacagtgagcatgtt
gaggacaggcgcccaggctgctgtcgacaggcagaagaggaccgagggaagggacaccgc
aatcaggacggcagccactcaagagccaggcactcacctcagagcaccctgctccgtgag
cgccaccatagggacaactctgacaggagacttctcaagtgggataggtcctctcaggag
agaaaggccaaaaaacacaagtccaagaagaagaaggagaggagcaagcatagtgatcgc
tggagctcagagcgggacacagctgagaggaactcggatgacagctctagaagacacaaa
aaaaagaagaagaaaaagaagaggaggaggagacatgatagcactcattcctcacctaat
aacagctctggtccaagtgccaaggagtggcggtgtagtgacgactacaggtcaagccac
aagcgacaccaccatgacggagaacagtctccacacccagggaaacgctgtcggtctgaa
actgaccctcatctgcccagccacccagggaatgaggcatctcagttgggtgaaattgct
cacaaatgcttggtgaatggcctaaatgttgacagaaactataaacacttgaacagtgaa
gtgtcttcatctcacagtgttggacaaaatacggaccttggctgttctaaacagcttcct
caaaagacgtga
DBGET
integrated database retrieval system
