Scleropages formosus (Asian bonytongue): 108940131
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Entry
108940131 CDS
T04919
Symbol
ddx39a
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfm03041
]
108940131 (ddx39a)
Enzymes [BR:
sfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108940131 (ddx39a)
Spliceosome [BR:
sfm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
108940131 (ddx39a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
108940131
NCBI-ProteinID:
XP_018617579
UniProt:
A0A8C9TAC7
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Position
20:complement(20964863..20972986)
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AA seq
427 aa
AA seq
DB search
MAENDVDNELLDYEEDEEPQAAPESAVPAGKKEVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMPTVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALIR
NKTLNLKNVKHFVLDECDKMLEQLDMRRDVQDIFRLTPHEKQCMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCV
ALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDAKTLNDVQDRFEVNVAELPEEIDIS
TYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaatgatgttgacaatgagctgctggactacgaggaggatgaggagccacag
gcagccccagagagtgcagtccctgcggggaagaaagaggtgaagggctcctacgtctcc
atccacagctctggcttcagagatttccttctcaaacctgagctcctccgtgccattgtg
gactgtggttttgagcatccatctgaagtccaacacgagtgcattccccaggccatccta
ggaatggatatcctgtgtcaggctaagtctggcatgggtaagacggctgtgtttgttttg
gccaccctgcagcagattgagccagtggatggccaggtttccgtgttggtgatgtgccac
acacgtgagctggccttccagatcagcaaggaatatgagcgcttctcaaagtacatgccc
acagtcaaggtggctgtgttcttcggtgggctctccattaagaaggatgaggaggttctg
aagaaaaactgcccccacatcgtggtgggaacgcctgggcgcatccttgcactcatccgc
aacaagacccttaacctcaagaatgtcaagcactttgtcctggatgagtgtgacaagatg
cttgaacagctggacatgaggcgtgacgtacaggacatctttcgactgacaccccatgag
aagcaatgcatgatgttcagtgccactctcagcaaggagatccgaccagtgtgccgcaag
ttcatgcaggatcccatggaggtctttgtggatgatgagactaagctgacccttcatggc
ctgcaacagtactactgcaagctcaaggacagtgagaagaatcgcaagctctttgacctg
ctggatgttctggagttcaatcaggtggtcatttttgtgaagtcggttcagaggtgtgtg
gcgctgtctcagttgctggttgagcagaacttcccagctattgccatccatagaggcatg
gctcaggaggagaggctgtcccggtaccaacagttcaaggatttccaacggcggattctg
gtggctaccaacttgtttggtcgtgggatggatattgagagagtcaacatagtcttcaat
tatgacatgcctgaggattcggacacctatctgcatagggtcgcccgtgctggcaggttt
ggaacgaagggcctggccataacctttgtatcagatgaaacggatgccaagaccttaaat
gacgtccaagatcggtttgaagtcaatgtggctgagcttcctgaggagattgacatctca
acctacattgaacagtccagataa
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