Scleropages formosus (Asian bonytongue): 108940250
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Entry
108940250 CDS
T04919
Symbol
xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
108940250 (xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfm03400
]
108940250 (xpc)
DNA repair and recombination proteins [BR:
sfm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
108940250 (xpc)
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GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
108940250
NCBI-ProteinID:
XP_018617766
UniProt:
A0A8C9S3X2
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Position
2:33905696..33914959
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AA seq
879 aa
AA seq
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MAKRKGSAARAAKAHDHDKKKCKEVEEGKKKGQKEGANIVQKAETRYAAKTAKNFKKEKC
PSQGSRSKCKTPGKRTSKYFHNSSEVKDEPVVTSDDGDDDGNNSTGVAQPESAPSVLKVA
KEEEEESDEDVEWEDVEELTETTAVLPSQPVEIEIEAPEHSLKRQRREKRKAEFETYLRR
MVKRFNKELLVDMHKVHLLCLVANGIFRNRLCSDPDLLAIALSLLPARFTTTPPEDVDTS
FLCSLLKWFGATFTMNPELPEKPQESARDVLEKRFGSHCARDHQEMTHLFLIMLRSIRLF
CRLVLSLQPVPLKAAPDKNKTKAAGNAPSQGSAKACVSPGEKRSARSRSSGPERGGKRQR
KREKEQKEETEEEKEGVETAAVLKPKNKQRRSVASKVCYKEESSEGEEVSDGEEFRASSA
EDSEDSEAEVNRRPGRKGRGRGEASRNQDNRKDENSEEEVIKSFKRKRGKGEDEWLEVYL
EQAERWVCLDVQQTGVGQPMLCSRQATQPLSYVLAVDGDGCLKDLGCKYDPTWLTSTRKR
RVDQEWWEESLQSFRSPASPREEKEDKELQAKLLDKPLPTSIAEYKNHPLYALKRHLLKY
EALYPPTAAILGYCRGEAVYSRDCIHTLHSRDTWLKEARTVRLGEVPYKMVKGFSNRSRK
ARLEPQNRDIDDLALFGHWQTEEFQPPVAVDGKVPRNEFGNVYLFRACMLPVGCVHMRLP
NLHRVARKLDIDCAAAVTGFDFHGGFSHPVTDGYIVCEEYQEVLQAAWENEQELIEKKER
EKREKRVLANWALLAKGLLIKERLRKRYGAKGVEQMPGQEGLSSGEEEEGERQTAAVDLA
TYWPQNRQEDQGAEASGQKPITKREKKGQEKHLFPFEKV
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaggaaagggtctgcagccagggctgcaaaagcgcatgatcatgataaaaag
aagtgtaaagaagtcgaggaggggaaaaagaaaggacaaaaggaaggagcaaatatcgta
cagaaagcagagaccagatatgcagcgaaaacagcaaaaaacttcaaaaaggagaaatgt
ccgtctcagggctctaggtctaagtgtaaaactccaggcaaacggaccagtaaatatttc
cacaactcctccgaggtgaaggatgagcctgttgtcaccagtgatgatggtgatgatgat
ggaaataacagcactggtgttgcccaacctgagagtgcaccttcggtgctgaaggtggcg
aaggaagaggaagaagaaagtgacgaagatgtagaatgggaagatgtggaagagctgaca
gagacaactgctgtgcttccctctcagccggttgagattgagatcgaggccccggaacat
tcccttaaaaggcaacgcagggagaagaggaaagcagagtttgagacttatctgcgccgt
atggtgaagcgctttaacaaagaactgctggtggacatgcacaaggttcacctcctctgc
ttggtagccaacgggatcttccgaaaccggctgtgcagtgaccctgaccttttggccata
gccctttccctgttacctgctcggttcacaactacacctccagaagatgtagacacctcc
ttcctctgcagtctgcttaagtggtttggggccaccttcaccatgaaccctgaactccct
gaaaagccacaagagagtgcacgtgatgtgctagagaagaggtttgggagccactgtgcc
cgtgaccaccaggaaatgacacatctcttcctgatcatgctgcggtctattcggctgttc
tgccgcctggtgctctccttacagcccgtacccctgaaggctgcccctgataaaaacaag
accaaggcagcaggcaatgctccctcgcagggctctgcaaaggcctgcgtctctccaggt
gagaagaggtcagcaagaagcaggtccagtgggcctgagcggggtgggaagcgacagcgg
aagagggagaaggagcagaaagaggagacagaggaggaaaaggagggggtggagactgca
gctgtcctgaaacccaaaaacaagcagcggcggagtgtggcttccaaggtgtgctacaaa
gaggagagcagtgaaggggaggaggttagtgatggggaggagttccgggccagtagtgct
gaggatagtgaggattcagaggcagaggtgaacaggaggccaggcaggaaggggaggggc
agaggcgaggcctcccgaaatcaagataatcggaaggacgaaaacagcgaggaggaggta
ataaagagcttcaagaggaagcgtgggaaaggggaagacgagtggctggaggtgtatctg
gagcaggcagagcgctgggtgtgtcttgatgtccagcagaccggcgtgggacagcccatg
ctctgctccaggcaggccacccagcccctgagttacgtgctggctgtggatggggatggc
tgcctcaaggacctgggctgcaagtacgaccccacctggttgacatcgactaggaagcgc
cgtgtggaccaggaatggtgggaggagtccctccagagcttccgtagccctgcttctcca
agagaggagaaggaagataaggagctccaggcaaagctcctggacaagccgttgccgact
tccattgctgagtacaagaaccaccccctgtacgcgctgaagaggcacctgctgaagtac
gaggcactctacccccccacagcggccatcctgggatactgcagaggggaggcggtctat
tccagggactgtattcacacactgcactccagggacacttggctgaaggaggcgcggact
gttcggctgggagaggtgccctacaagatggtgaaaggcttttccaatcgctcacggaag
gctaggctggagccgcagaaccgggacatcgatgatctggcgctctttggccactggcag
actgaggagttccagcccccagtggctgtggatggaaaggtgcctcgcaatgaatttggg
aacgtgtacctgtttcgggcatgcatgcttcccgtgggttgtgtccacatgcgactgccc
aacctgcacagggtggcccgcaagttggacattgactgtgctgcagcggtaaccgggttt
gacttccatggaggcttctcgcaccctgtcactgatggctacattgtttgcgaggagtat
caggaggtgctgcaggctgcctgggagaatgagcaggagctcattgagaagaaggagaga
gagaagcgggagaagagggtactggccaactgggctctccttgcaaagggacttctgata
aaggagaggctacggaagcgctacggggcaaagggtgtggaacagatgcccggccaggag
ggcctgtcctcaggggaggaggaagaaggagagcgacaaacagcagctgtggacctggca
acctactggcctcagaatcgacaggaggaccagggggcagaagcttcaggccagaaacca
ataaccaagcgggagaaaaaaggccaagagaaacacctcttcccctttgagaaagtgtga
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