Scleropages formosus (Asian bonytongue): 108940348
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Entry
108940348 CDS
T04919
Symbol
sox6
Name
(RefSeq) transcription factor SOX-6 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfm03000
]
108940348 (sox6)
Transcription factors [BR:
sfm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108940348 (sox6)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
108940348
NCBI-ProteinID:
XP_018617967
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Position
2:complement(9294159..9457609)
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AA seq
784 aa
AA seq
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MSSKQVTSPFTPTADGEDTMSQERLPWEKEESMDPHSGPHLTLHGLQQGKTHPEELPDIS
SIPPESHWDGMVSAQQRMESDSNKVCSLYSFRNNSTSPHKPEEGARERGDMLGSSAFGTP
ERRKGSLADVVDSLKQKKLEEMTKTEQDESSCMEKLLSKDWKEKMERLNTSELLGEIKGT
PESLAEKERQLSTMITQLIGLREQLLAAHDEQKKLAASQMEKQRQQMELARQQQEQIARQ
QQQLLQQQHKINLLQQQIQQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITYKP
GDNYPVQFIPSTMAAAAASGLSPLQLQQLYAAQLANMQVSPGAKMPSLPQPPNSSGPISP
TGFKNEKRSSSPVTQVKDEGTQPLNLSARPKTGEPVKTPTSPTHSLFPSSKASPNSLSAK
GIPSPISGLGRGSSLDILSSLNSSALFGDQDAVMKAIQEARKMREQIQREQLQHHSQGVD
GKLPGLSMGLNNCRVDKDRAHFESLGQHLGKLGEDGKMSHRVIDLTRPEDLDGNKEVNGS
ADKPQQYYCWPTGGTSTAEARVYRESRGRNSNEPHIKRPMNAFMVWAKDERRKILQAFPD
MHNSNISKILGSRWKAMTNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIIDGKKL
RIGEYKQMMRSRRQEMRQFFTVGQQPQIPISTSAGVVYPGAITMATTTPSPQMTSDCSSA
SASPEPAIPVIQSTYSMKVEPGTMLTSGEAVNGDDDMDMYEDFEDEPKSDYSSDNETQEP
VSAN
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaagcaagtcacctctccgttcacccccaccgctgatggagaggacaccatg
agccaagagcgcctgccctgggagaaggaagagagtatggacccccacagtggcccccat
ctaaccctgcatggcctgcagcagggcaaaacccaccccgaggagctgcctgacatcagc
agcatcccacccgagtcccactgggacggtatggtgtcggcccagcagcgcatggagtct
gacagcaataaggtgtgctccctatactcgttccggaataactctacctcaccgcacaag
cccgaggagggggcccgcgagcgtggggacatgctggggagctctgctttcggcacaccc
gagcgccgcaagggaagcctggccgatgtggtggactctttgaagcagaagaagctggag
gagatgaccaagacagagcaggacgaatcctcttgcatggagaaacttctatctaaagac
tggaaggagaagatggagcgtctgaacaccagcgagctcctgggagaaataaaaggcacc
cctgagagcctcgcggagaaggagcgccagctctctaccatgatcacccagctgatcggc
ctgcgcgagcagctcctggccgcccacgatgagcagaagaagcttgccgcctcgcagatg
gagaagcagcggcagcagatggagttggctaggcagcagcaggagcagatcgccagacag
caacaacagctcctgcagcagcaacacaagatcaaccttctccagcagcagattcagcag
gtccagggtcacatgccgccgctcatgatccccatttttccacacgatcagcgcactctg
gcagcagcggcggcggcgcagcaggggttcctcttccctccgggaatcacttacaagcca
ggtgataactacccggtgcagttcattccgtccacaatggcagcggccgccgcttcagga
ctcagcccgctccagctccagcagttgtatgcagcccagctggcgaacatgcaggtctcc
ccaggagccaagatgccctcccttcctcagccacccaactcctctgggcccatctcacct
acaggctttaagaatgagaagaggtcctcgagtcctgtcactcaagtaaaggacgaggga
acacagcccctgaacctctctgcccggccaaagactggtgagccggtgaagacgcccacc
tcccccacacacagcctgttcccgagcagcaaggccagccctaacagcctgtcagccaag
ggcatccccagccccatctctggcctgggccggggctcctctcttgacatcctgtccagc
ctgaactccagtgcgctcttcggggaccaggacgccgtgatgaaggctatccaggaagcc
cgcaagatgcgggagcagatccagcgggagcagctgcagcaccactcgcagggtgtggac
ggcaagctccccggcctcagtatgggcctcaacaactgccgagtggacaaggacagggca
catttcgagagccttggccaacacttgggaaagctgggtgaggacggcaagatgagtcac
agagtgatcgacctcacaaggccagaagacttggatgggaacaaagaagtcaatggctca
gcagataaaccacagcaatattattgttggccaacaggaggcaccagcacagctgaggcg
cgtgtctacagggaatcccgggggaggaacagcaacgagccacacatcaagcggcccatg
aatgccttcatggtctgggccaaagatgagcgtcggaagatcctccaggccttcccagac
atgcacaattccaacatcagcaaaatccttggatcgcgttggaaggccatgaccaatcaa
gagaagcagccctactacgaggagcaagcccggctcagcaagatccacctggagaagtac
cccaactacaagtacaagccccgccccaagcgcacttgcatcattgacggcaagaagctg
cgcatcggcgagtacaaacagatgatgcgctcgcggaggcaggagatgcggcagttcttc
acagtgggacagcaacctcagattcccattagcaccagtgcaggcgtagtctaccctggt
gccataaccatggccaccaccacaccctctccacagatgacatcggactgctcgagtgca
tcggccagccctgagcccgccatccctgtcatccagagcacctatagcatgaaggtggag
cctggcaccatgctgaccagcggcgaagctgtcaacggagatgatgatatggacatgtac
gaagactttgaggatgagcccaaatcggactacagcagtgacaatgagacgcaagagccg
gtcagcgccaactga
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