Scleropages formosus (Asian bonytongue): 108940450
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Entry
108940450 CDS
T04919
Symbol
vti1a
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X3
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108940450 (vti1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfm04131
]
108940450 (vti1a)
Membrane trafficking [BR:
sfm04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
108940450 (vti1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Mer2
CAP59_mtransfer
Laminin_II
DUF5344
DUF1664
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
108940450
NCBI-ProteinID:
XP_018618152
LinkDB
All DBs
Position
3:complement(5589980..5687932)
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AA seq
194 aa
AA seq
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MSSDFETYEQDFGTLTAEITNKIGRIPKLAGEEKTQLVINVDKQLEEVRELLEQMDLELR
EIPVQSRGMYTNRMKSYKQEMEKLEKDFKRSRIAYSDEVRNELLGAEGSSSESQLIKLRE
ERAHLLDNTERLERSSRRLEAGYQIAVETEQVGQEILANLHTDREKIQRSRDRLRETDAN
LGKSSRILTGMLRR
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggatttcgagacgtacgagcaggacttcggcaccttgacggcggagattacg
aacaaaatcgggcgcatccccaaactggccggcgaggagaagacgcagctggttataaat
gttgacaaacagcttgaagaagtcagagagttgttggagcagatggacctggagctgagg
gagatcccagtgcagagcagaggcatgtacaccaacaggatgaagagctacaaacaggag
atggagaagctcgagaaagacttcaaaaggtcacgcatcgcctacagtgacgaggtgcgg
aatgagctgctgggggccgaagggagctcctccgagagtcagctgataaagttacgtgaa
gagagagcacatctgctggacaatactgagagactcgaaaggtcatcgcgcagactggag
gcgggctaccagatcgccgtggagacagagcaagtcggccaggaaatcctggccaatctg
cacactgacagagagaagatccagcgctcccgagatcggctgagggagacagacgccaac
cttgggaagagctccaggattctgacgggaatgctgagaaggtaa
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