Scleropages formosus (Asian bonytongue): 108940558
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Entry
108940558 CDS
T04919
Symbol
copb1
Name
(RefSeq) coatomer subunit beta isoform X1
KO
K17301
coatomer subunit beta
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfm04131
]
108940558 (copb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfm04147
]
108940558 (copb1)
Membrane trafficking [BR:
sfm04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
108940558 (copb1)
Exosome [BR:
sfm04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
108940558 (copb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
Cnd1
HEAT
HEAT_2
HEAT_EZ
MMS19_N
Coatomer_g_Cpla
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
108940558
NCBI-ProteinID:
XP_018618321
UniProt:
A0A8C9V430
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Position
2:complement(9007965..9020230)
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AA seq
953 aa
AA seq
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MTATRNVCYTLINVPMDMEPPSEVRLKMDLEKGQIKAKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIRNF
LVNEKDASCKRNAFMMLIHADQNRALDFLSTCIDQVHTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSNAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPTHERVLQDLVMDILRVLSAPDLEVRKKTLQLALDLISSRNVEELVIVL
KKEVIKTNNVTEHEDTDRYRQLLVRTLHTCSVRFPDMAANVIPVLMEFLSDSNEAAAADV
LEFIREAIQRFDSLRPLIIEKMLEVFHAIRAVKIYRGALWILGEYCITKDDIQSVMTEVR
RSLGEIPIVENEIKKELGEVKAGDEVMTAPVQRLVTEMGTYVTQSALSSSWPSKKEEDRP
PLRGFLMDGNFYVAASLATTLTKLALRYVSLVQDKRKQNSFVAESMLIMSTVLHLGKSVL
PKKPITDDDVDRISLCLKVLSECPPLMHDIFNKECRESLSRMLTVKLEEEKLSQKKESKK
RSIAVQADDPIFFMQLTAKNELTSKEDQFQLSLLAAMGNTQRKEAADALASKLNKVTQLT
GFSDPVYAEAYVHVNQYNIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANIKVASTENGIIFGNIVYDVSGAGSDRNCVVLSDIHIDIMDYIQPASCTDAEF
RQMWAEFEWENKVTVNTNMTDLNEYLQHILKSTNMKCLTPEKASSGFCGFMAANLYARSI
FGEDALANVSIEKPIHLGPDALLSGHIRIRAKSQGMALSLGDKLNLSQKKSRT
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacagccaccagaaacgtgtgttataccctgataaatgtgccgatggacatggaaccg
ccatcagaagtccgtctgaaaatggatttagaaaagggtcaaattaaggcaaagacggag
gccctgaagaaggtgattatcatgatcctgaatggcgagaagctgcccggccttctgatg
acaatcattcgctttgttcttccgctgcaagaccataccattaagaagctgttactggtt
ttttgggagattgtgcccaagactacgccggatggcaagctgctccaggagatgatcctg
gtctgcgatgcttacagaaaggaccttcagcaccccaatgagttcatccgcggttccaca
ctgcgcttcctgtgcaagctgaaggaggcagagctattggagccactcatgccagctatc
cgtgcctgcctggagcatcggcacagctacgtgcgccgcaacgctgtgctggccatctac
accatctacaggaattttgaacatttgattccggatgcccctgagttgatccgcaatttc
ctggtaaacgagaaggatgccagctgcaagagaaatgcattcatgatgctcattcatgct
gaccagaaccgggcgcttgacttcctcagcacctgcatcgaccaagtccacacttttgga
gacattctccagctggtcatcgttgagcttatctacaaggtttgccacgccaacccatca
gagcgtgcccgcttcatccgctgcatctacaacctgctgcagtcatccagccctgccgtc
aagtatgaggctgctgggaccctggtcaccctgtccaacgcacccacggccatcaaggct
gctgctcagtgctacattgatctgatcatcaaggaaagcgataacaatgtcaagctgatc
gtcctggatcgactgattgagctgaaagaacacccaacccatgaacgtgtgcttcaggat
ttggtgatggacatattgagagttttgtccgcacctgacctggaggtgcgaaagaagacc
ctccaactggctctggacctcatttcatcccgtaatgtagaggagcttgtgattgtcctc
aagaaggaggtgattaaaaccaacaatgtgacagagcacgaagacacagacaggtaccgg
cagctactggtgcgcacgctccacacatgcagtgtgcgctttcctgacatggcagctaat
gtcatccctgtgctcatggagttcttgagtgacagcaatgaggcagcagctgccgatgtg
ctcgagttcatccgggaggccatccagaggttcgacagtctgcggcccctcattattgag
aagatgcttgaagttttccatgccatcagggctgtcaagatatacagaggggcactgtgg
attcttggagagtactgcattaccaaggatgatatccagagcgtgatgaccgaagttcga
aggtcccttggagagatccccattgttgagaacgagataaagaaggagctgggtgaagtg
aaggcaggggatgaggtcatgacggcccccgtgcagaggctggttactgagatgggcacc
tatgtcacacagagtgccctcagctcctcatggccttccaagaaggaggaggacagacct
ccgctaaggggctttttgatggatggcaatttctacgttgctgcttccttggcaacgact
ctcaccaaactggcccttcgctatgtgtcccttgttcaagacaaaaggaagcaaaattcc
ttcgtggctgagtccatgcttattatgtcaactgtgcttcacctgggcaagtccgtgctg
cccaaaaagcctatcacggatgacgacgtggaccgcatctcactgtgcctcaaggtgctc
tctgagtgcccgcccctcatgcatgacatcttcaacaaggagtgtcgtgagtcactgtca
cgtatgctcactgtcaagctggaggaggagaaactgtctcagaagaaagagtcgaagaag
cgcagcatcgcagtgcaggccgacgaccccatcttcttcatgcagctcacagccaagaat
gagttgacctccaaggaggaccagttccagctcagcctgctggctgccatgggaaacacc
cagaggaaggaggctgctgacgcactggcctctaagcttaacaaggtcacccagctaact
ggcttctcagacccagtctatgctgaggcctacgttcacgtcaaccagtacaacatcgtt
ctggatgtgctggttgtcaaccagaccagcgacaccttgcagaactgcaccctggaactt
gccactctcggtgacttgaaactggtggagaaaccgtcccctctcacactggcacctcat
gactttgccaacatcaaggctaacatcaaagtggcatccacagagaacgggattatcttc
gggaacatagtgtacgatgtgtccggtgcaggcagcgataggaactgcgtggtgcttagc
gacatccacatcgacattatggactacatccagcctgcctcctgcaccgacgcagagttc
cggcagatgtgggctgagtttgagtgggagaacaaggttacggtaaatacaaacatgacg
gacctcaatgagtacctccagcacatcctcaaatctacaaacatgaagtgcctgactcca
gagaaggcttcatctggattctgtggcttcatggctgccaacctgtatgctcgctccatc
ttcggtgaggacgccctagccaatgtcagcattgagaagcccattcacttaggaccagac
gcattgctcagcggtcatatccgcatccgggccaaaagccagggcatggcattaagcctg
ggagacaagctcaacctgtcccagaaaaagagccgcacataa
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