Scleropages formosus (Asian bonytongue): 108940677
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Entry
108940677 CDS
T04919
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfm03016
]
108940677 (cdkal1)
Enzymes [BR:
sfm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
108940677 (cdkal1)
Transfer RNA biogenesis [BR:
sfm03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
108940677 (cdkal1)
Prokaryotic type
Methylthiotransferases
108940677 (cdkal1)
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Gene cluster
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Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
108940677
NCBI-ProteinID:
XP_018618500
UniProt:
A0A8C9SS81
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Position
18:7807521..8106503
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AA seq
559 aa
AA seq
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MEDLEDIEDMVSGQEPTGQERQAARRSVVPRARRRKQETVEELQADSVIPGMQKIWMKTW
GCSHNNSDGEYMAGQLAASGYQITENPAEADLWLLNSCTVKNPAEDHFRNSIKKAQEQEK
KVVVAGCVPQAQPRMEYLKGLSVIGVQQIDRVVEVVDEAIKGHSVRLLGQKKDNGKRLGG
ARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGELASYPIEELVERARQSFLEGVC
EIWLTSEDTGAYGKDIGTDLPSLLWRLVEVIPEGAMLRLGMTNPPYILEHLEEMAKILGH
PRVFAFLHVPVQSGSDSVLMDMKREYCVADFRRVVDFLKDRVPGITIATDIICGFPGETD
ADFQETLNLVKEYRFPSLFINQFYPRPGTPAARMEQVPAQVKKQRTKELSQLFHSYHPYE
HKVGQRQHVLVTEESFDAQYYVAHNKFYEQVLVPKSPEFKGKMVEVEIYETGKHFMKGRP
VEDSEVFTPSIAQPLRKGEVSGLPNDFKTPCPNGTHSSPSEALGPTHCSRILDAVGLKGL
SIGLALLAVVVALAMERLC
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggaggacctggaggacatcgaggacatggtgtcgggacaggagcccacgggacaggaa
aggcaggccgccaggaggagcgtcgtgccccgagcgaggaggaggaagcaggaaacggtt
gaggagctgcaggctgacagtgtcattcctggcatgcagaagatctggatgaagacctgg
ggctgttcccacaataactctgatggggagtacatggcgggacagcttgctgccagtgga
taccagataaccgaaaacccagctgaggccgacctgtggctcctcaacagttgcacggtt
aagaatcctgccgaagaccacttcaggaactccatcaagaaggcccaggagcaggagaag
aaggtggtggtggcgggatgtgtccctcaagcccagcccaggatggagtacctcaaagga
cttagtgtcattggggtgcaacagatcgatcgcgtggtggaggtggttgacgaggccatt
aaaggtcactccgtgcgcctattgggtcagaaaaaggataatggaaaacggctggggggg
gcgagattggacttgccgaagattaggaagaaccccctgatagaaatcatttccatcaat
acagggtgtctgaatgcctgcacctactgcaagacgaagcacgcgagaggggagctggcc
agctaccccatagaagagctcgtggagagggccaggcagtccttcctggagggcgtgtgt
gagatctggctcactagcgaggacacgggggcctatgggaaggacatcggcacagacctg
ccctcgctgctctggaggctggtggaggtgattcccgagggggccatgctcaggctcggc
atgacgaaccccccttacatcctcgaacacctcgaggagatggccaagatcctcggccac
ccgcgggtgttcgccttccttcacgttcccgtgcagtcgggctccgacagcgtcctcatg
gacatgaagagagagtactgcgtggcggacttcaggcgcgtcgtagacttcctgaaggac
agggtgcctggcatcaccatcgccactgacatcatctgcggttttcccggtgagacagac
gccgacttccaggagaccctgaatctcgtgaaggagtaccgcttcccgagcctcttcatc
aaccagttctacccacgacctggaacccccgccgccagaatggagcaagttcctgcccaa
gtgaagaaacagcgaacgaaagaactgtctcagctgttccactcgtaccacccatatgag
cacaaggtgggccagagacagcatgtgctcgtaacggaagagtccttcgacgcccagtac
tacgtggctcacaataaattctacgaacaggttctggtgcccaaaagtcccgagtttaaa
ggtaaaatggttgaggtggagatctatgaaacggggaagcacttcatgaagggacggcct
gttgaggactccgaagtcttcaccccgtccatagctcagcctctgaggaaaggcgaggtg
tccggcctccctaacgacttcaagactccttgtccaaacggcactcacagcagcccctcc
gaagccttggggccaacacattgttcacggatcctggatgcggtgggactcaaaggtctc
tccattggcctagccctgctggccgttgttgtggctctcgccatggaaagactctgttag
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