Scleropages formosus (Asian bonytongue): 108940751
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Entry
108940751 CDS
T04919
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71-like
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfm03019
]
108940751
04121 Ubiquitin system [BR:
sfm04121
]
108940751
Enzymes [BR:
sfm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108940751
Messenger RNA biogenesis [BR:
sfm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108940751
Ubiquitin system [BR:
sfm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108940751
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
Filamin
DUF5128
SGL
TEN_NHL
zf-B_box
Beta-prop_IFT122_1st
zf-RING_5
DUF5711
ANCHR-like_BBOX
CRLF3_N
Motif
Other DBs
NCBI-GeneID:
108940751
NCBI-ProteinID:
XP_018618632
LinkDB
All DBs
Position
18:9934627..9945701
Genome browser
AA seq
807 aa
AA seq
DB search
MASFSDASLQTCQLCKEFCGSSASPTSSSSSQTSSSSTLSARRLHTLPCLHSFCRQCLQG
QQNPGDPLRLCCPTCDPKSSGSQCGAGALPSPSFLLSGLLDVMVSTVEQNKPGCRSNSRP
HGSLLGSHPFEGPCCSCCDEGNRATSHCLDCQEFLCSNCARAHRRVRLTKDHFVEGLVES
LPHTSWKNNTSTAVDIAGSFHSTYPPLPVFQDRISICQQHDNEVLCFFCNTCSAPVCREC
NVECHTSHRVVYLRDAIQECRNFTIQLLDNAQQGKQAVQLSIEKVQAIASQVELKAKVIQ
AEVKAVTLQHKKAVDERERELLWKVEKIRQVKIKTLYLQVEKLRQALNKLDSTTSAVQQV
LEDGRSLEVLLARERMLAQVEELRALRCLLQPQEDDHITFTLPDQALLLSVQSLGLVSSG
SFAPLTKATGEGLKKAIRGKVASFTVVGYDHDGEPRLSGGDDISIVAMGPDGNLLAVDVL
DRQDGTYMVSYLPRVEGEHIITVLICNQPIEGSPFKVIVKSGRSYVGVGIPVASFGGEGD
SDGQLCRPWGICVDKDGFIVVADRSNNRIQIFKPSGTFHHKFGTQGSRPGQFDRPAGVAC
DSQRRIIVADKDNHRIQIFTFEGHFLLKFGERGAKNGQFNYPWDVAVNSDGKILVSDTRN
HRVQLFSPSGIFLNKYGFEGALWKNFDSPRGVAFNHEGHLVVTDFNNHRLLVIRPDCQSA
RFLGLEGSGNGQFLRPQGVAVDQENRIIVADSRNHRIQVFEASGNFLCKFGSQGDSFGQM
DRPSGVAVTPDGMIVVVDFGNNRILIF
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgttttcagacgccagtttacaaacatgtcaactctgcaaggagttttgtggc
tcctctgcttcgccaacctcgtcttcctcgtcgcaaacatccagctcctctactttatca
gccagaaggctgcacacgcttccctgcctccattctttctgcagacagtgcctgcaaggg
caacagaaccctggagatccactgagactgtgctgtccaacatgcgatccaaagagttct
gggtctcagtgtggtgcaggtgccctgccttcacccagcttcctccttagcggactgctg
gatgtgatggtctccactgtggagcagaacaaacctggctgcaggagcaatagcaggcct
catggcagcctgcttgggtcgcatccctttgagggtccttgctgcagctgttgcgatgag
ggcaaccgtgctacctcacactgcttggactgccaggagttcctttgcagcaactgcgcg
cgtgcccaccggcgtgtacgcctgaccaaggatcactttgtggaaggattggtggaaagc
ttgcctcacacctcctggaaaaacaacaccagcactgcagttgacatcgccggttccttt
cattctacttatccaccgctgcccgtctttcaggacaggataagtatctgccaacagcat
gacaacgaagttctctgcttcttctgtaacacctgctctgcaccagtctgccgagagtgc
aacgtggaatgtcacacaagccatagggtggtctacctccgtgacgccattcaggagtgt
cgcaatttcaccatccagctgctagataatgcccagcaaggcaaacaggctgttcagctc
agcattgagaaggtgcaggcaattgccagtcaggtggaactcaaagcaaaagtgatccag
gcagaagtgaaagctgtcactctgcagcataagaaggctgtggatgagcgtgagcgtgag
ctcttgtggaaggttgagaaaatcaggcaggtcaagatcaagactctgtacctgcaggtg
gagaagctgcgtcaggcccttaataagttggacagtaccacctcagctgtacagcaggtt
ctagaggatggccggagcctggaggtgttgttagcccgtgagcgcatgttagcacaggtt
gaggagctaagggctctacgctgtttgctgcagccacaggaggatgaccacatcacattt
accctgccagaccaggcactgctactttctgttcagtccctgggtctggtgagcagtgga
tcttttgccccccttaccaaagccactggtgagggcctgaagaaggcaataagaggcaag
gtggcctccttcactgtggtgggttacgaccatgatggggagcccaggttatcaggcgga
gatgacatttccattgtggcaatgggcccagatggaaacctgctcgctgtcgatgtgctt
gaccgccaggatggcacatacatggtcagctacctgccccgggtggaaggggaacacatt
atcactgtgctcatctgcaaccagcctattgagggcagcccttttaaagtcattgtcaag
tcaggccgcagctatgtaggcgtggggattcccgtggcatcctttggaggagagggcgat
agtgatggccaactgtgtcgaccttggggcatctgcgtggacaaggatggcttcattgta
gtagcagaccgcagcaacaaccgcatccagatcttcaagcccagcggcacttttcatcac
aagtttggaactcaaggatctcggcctgggcagtttgaccgccctgccggtgtagcttgt
gacagccagagaaggatcattgtggccgacaaggataatcaccgcattcagatattcacc
tttgaaggacacttcctcctgaagttcggggagaggggagccaagaatgggcagttcaac
tatccttgggatgtggccgttaattcagatggtaagatcctggtctcagacacacgcaac
catcgtgtccagctcttcagtcccagtggcatttttctgaacaaatatggcttcgagggc
gccctctggaagaactttgactctccgaggggtgtggccttcaatcacgagggccacctg
gtggtgacggacttcaacaaccatcggctgttggttatccggccagactgccagtcggcg
cgctttctaggcttggagggctcaggcaacggacaattcctgcggccacagggggttgct
gtggaccaggagaaccgaattattgtagcagattcccgcaaccaccgcattcaagtgttt
gaggctagtggtaactttttatgcaagtttgggtctcagggtgacagctttggacagatg
gatcgcccatcaggtgtagctgttactcctgatggaatgattgttgtcgttgactttggt
aacaaccgaatcctcatcttctaa
DBGET
integrated database retrieval system
