Scleropages formosus (Asian bonytongue): 108940800
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Entry
108940800 CDS
T04919
Symbol
gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03022
Basal transcription factors
sfm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108940800 (gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
108940800 (gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfm03021
]
108940800 (gtf2h1)
03400 DNA repair and recombination proteins [BR:
sfm03400
]
108940800 (gtf2h1)
Transcription machinery [BR:
sfm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
108940800 (gtf2h1)
DNA repair and recombination proteins [BR:
sfm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
108940800 (gtf2h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
108940800
NCBI-ProteinID:
XP_018618685
UniProt:
A0A8C9RPV7
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All DBs
Position
11:24737817..24750737
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AA seq
548 aa
AA seq
DB search
MAASSEEVLLVVKKVRQKKQDGTLYLMAERIAWGPEGKDRFTVSHLYADIRCQKISPDGK
AKIQLQLVLHTGESTTFHFANENSALRDRDAAKDLLQQLLPKFKKKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLSMNSVNHSTSNNKQEVGISAAFLADIRPQTDGC
NGLRYNLTSDIIESIFRTYPAVKQKYAENVPHNLTEKEFWTRFFQSHYFHRDRISTGLQD
LFSECAKQDEKGLKSMVGQGVKNPLVDLQSLEDKALDEGYGTAATPSTSNSNRTVKENSN
SAIIKRFNHHSAMVLAAGLRKQDPLNDQASETSSTDGNSRDSDLFQPPIKKVKLQEAIEY
EDLQQEDGLKTVSLNLKKSDRYSHGPVPIQTQHYTTSQDIINSVILVQHEMANYKPCLTQ
VMSSTMASSAIVALSPGGVLMQAGTQQAINQMVPSEVQSELKHLYTAAGELLRHFWSCFP
VNTPFLEEKVVKMRSNLERFQLTKLHPFQEKVQRQYFSTNLTGHLEEMLQTAYNKFHAWQ
TRRMMRKT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagcctcatcagaggaggtgctgctggtggtgaagaaggtgcggcagaagaagcag
gatggaacgttgtaccttatggcagagaggatcgcctggggcccagaggggaaggaccgc
ttcaccgtcagccacctgtatgcagacattcgctgtcagaaaatcagtccagatggcaag
gccaagatccagctgcagctggtccttcatacgggcgaaagcaccacgttccactttgcc
aatgagaacagcgccctgcgggaccgtgatgctgccaaggaccttttgcagcaactgctg
cccaagttcaagaagaaggccaataaggagctagaggagaagaaccgaatgctccaggag
gatccagtgctcttccagctctacaaagatctcgtggtgagccaggtgatcagcgctgag
gaattctgggccaatcggctgagcatgaactccgtaaaccactcaacgtctaataacaag
caggaagtggggatatcagcagccttcctggcagacatcaggcctcagacagatggctgc
aatggcttgagatacaacctcacttctgacatcatagagtccatcttcagaacgtaccct
gcagtgaagcaaaaatatgcagagaatgtgccccacaacctgacagagaaggagttttgg
acccgcttcttccagtcacactacttccaccgggaccggatcagcacaggcctgcaggat
ctcttctcagagtgtgccaagcaggacgagaaaggcttgaagtcaatggttggtcaaggc
gtgaagaaccctttggtggaccttcagtccctagaggataaggcgttggatgagggttat
ggtactgctgcaactccctccacctccaacagtaacagaacagtgaaggagaacagcaac
tcggccatcatcaagcgcttcaaccaccacagtgccatggtgctggcagcaggcctgcgc
aaacaagatccccttaatgaccaggccagtgagaccagtagcacagatggaaactcaagg
gattctgacctttttcagccacccatcaagaaggtgaagctgcaggaagccattgagtat
gaggaccttcagcaggaggatggcctgaaaactgtttctctgaacttgaagaaatcagac
agatattctcacgggcctgtgcccatccagacccagcactataccaccagccaggacatc
atcaactctgtgatcctcgtccagcatgagatggccaattacaagccttgtcttactcag
gtgatgtccagcaccatggccagctcagcaattgtagccctttctccagggggagtgctc
atgcaagccgggacgcaacaagccataaaccagatggtaccgagtgaggtacagtcagag
ctcaagcacctttatacagctgctggggagctgctgcgacacttctggtcctgcttccct
gtcaacacccccttcctggaagagaaggtggtgaagatgaggtcaaacctggagaggttc
cagctcactaagcttcacccattccaagagaaggtccagcgccagtactttagcaccaat
ctaacagggcaccttgaggaaatgctgcaaacagcctacaataagttccatgcttggcag
acccgacgtatgatgagaaagacatga
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