Scleropages formosus (Asian bonytongue): 108940806
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Entry
108940806 CDS
T04919
Symbol
rfwd3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfm04121
]
108940806 (rfwd3)
Enzymes [BR:
sfm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108940806 (rfwd3)
Ubiquitin system [BR:
sfm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108940806 (rfwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
Beta-prop_WDR5
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
WDR55
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
EIF3I
zf-RING_5
zf-rbx1
Beta-prop_EML_2
zf-C3HC4_3
zf-RING_Vps41
Beta-prop_WDR3_2nd
zf-RING_11
CFAP43_N
Myo5a
WD40_Prp19
zf-C3HC4_4
WD40_2
Beta-prop_RIG_2nd
zf-ANAPC11
Beta-prop_WDR75_1st
Rtf2
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Motif
Other DBs
NCBI-GeneID:
108940806
NCBI-ProteinID:
XP_018618694
LinkDB
All DBs
Position
11:complement(22896368..22910863)
Genome browser
AA seq
689 aa
AA seq
DB search
MEEMEVDEQPGGITTASGLEEPTVISDSGSSTEVEEEDDDGEPAFLNPSSSLNLAALRSR
VEGGVAGSPQSFTQNSGLRQTRLDAHLNHTPHDQFLNTIVHELFSGVAQSGFSVTEEEEV
QETEAQVSPLVPAVLSDSSQNVSASVLPAPLQNPAASGPLVATEMAPVAEVQLELTLASA
APPAGKEDDGGDGDGESCSICFEPWTTAGGHRLSALRCGHLFGFTCIDRWLRGQNAKCPQ
CNKKAKRTDIVLLYARKLRALDNSEQEGMKRSLEQEQSLRRKAELESAQCRLQLQVLTDE
CQKLRRQLQELKSLMAQPGCSPSQASQSSLTALSQRPDTGTGVQGGGHYTFAKAVLVSQA
GGCRVLSYCDPLSCLLASQPSPQATLVPGCGVKKVSAINLKACQYVPIHAKQIRGLAFSQ
QADSLLLSAALDNTIKLTSLLTNTVVQTYNAGRPVWSCCWCLDNNNYVYAGLSNGSVLVY
DTRDTSTHVQELSPLGSRCPVASLSYVPRAASSSFPCGGLIAGSLEGGCFWEQVDGTTYK
PHVLPLETGGCTDIQVEPDSRHCLVTYRPGRSNPSLRCVLMELNRTPLRDAGQEPVCSCS
PVQMFTAGSSCKLLTKNAVFRNPARDGSMLVCAGDEASSSTMVWDAGTGALIQKLPADMP
VLDICPFEVNQNYYLASLTEKMLKIYKWE
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggaagagatggaggtggacgaacaaccaggaggcatcaccaccgcttcagggctggag
gagcccactgtcatctccgactctgggagcagcaccgaggtggaggaagaggatgatgat
ggagagccagcattccttaatccaagttcttccttgaacttggcggctttgcgaagcaga
gtggaaggcggtgtcgcaggctcgcctcagtccttcactcagaacagtgggctgcggcaa
accaggttagatgcacatctcaaccataccccccatgaccaatttctgaacacaatagtg
catgaactgttcagtggtgtagctcagtctggatttagtgtcactgaggaggaggaggtg
caggagacagaagcccaagtcagtcctctcgtccctgctgttctttccgattccagtcag
aacgtcagcgcttcggtgctcccagcacctctacagaatcctgctgcttcaggtcccctg
gttgccacggagatggcacctgtagctgaagtacagcttgagcttacattagcatcagca
gctccccctgcaggcaaggaagatgatggtggtgatggtgatggagagagctgctcaata
tgctttgaaccctggaccacagctggcgggcaccgactgtctgccctgcgctgcggccac
ctctttggcttcacctgtattgatcgctggctgaggggccagaatgccaagtgtccccag
tgcaacaagaaggccaagcgcactgatatcgtcctgctgtatgcgcgaaagctgcgggca
ctcgacaacagtgagcaggagggcatgaagaggtccctggaacaggagcagtcattgcgc
aggaaggctgagctggagtctgcgcagtgccgcctgcagctgcaagttctgacagatgag
tgccagaagctgcgcagacagctgcaggagctaaagtcactgatggctcagccaggctgc
agcccttcccaggcctcgcagtcttccctgacagcactgtcccagcggccagacacagga
accggggtccagggtgggggtcactatacctttgccaaggcagtgctggtgtcccaggcg
ggtggctgccgggtgctgtcctactgtgatcccctcagctgccttctggcctctcaaccc
tccccacaggccaccctggtgccaggctgcggggtgaagaaagtcagtgccatcaacctg
aaggcctgccagtatgttcccatccatgccaagcagatccgaggcctggccttcagccag
caggcagacagcctcctgctctcagcagcgttggacaacaccataaaactcaccagcttg
ctcaccaacacggtggtacagacatacaacgctggccggccggtctggagctgctgctgg
tgcctggacaataacaactacgtgtatgcaggcctgagcaatggctctgtgctggtgtat
gacacaagggacaccagtacccatgtacaagaactctccccgctgggttcgaggtgtcca
gttgcttccctgtcgtatgtcccccgggcggcttccagctccttcccatgcggtggcctt
attgctggttccctggagggaggctgcttctgggagcaggtagatgggactacctacaag
ccacatgtgctgccactggaaactggaggttgcactgacatccaggtggagcctgacagc
cgccactgcctggttacctaccggccaggacggtccaacccttccctacgctgcgttctg
atggaactaaaccggaccccactgcgtgacgcaggtcaggagccagtttgctcctgctcc
ccagtgcagatgttcactgccggctcctcctgcaaactgctcaccaagaacgccgtgttt
cgaaacccggcacgggatggctccatgctagtgtgcgctggggacgaggcctccagctcc
accatggtgtgggatgcaggaactggggccctgatccaaaagctaccagctgacatgccg
gtgctggacatctgtccctttgaggtgaaccaaaactactacctggcttccctgacggaa
aagatgctgaaaatatacaagtgggagtga
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