Scleropages formosus (Asian bonytongue): 108940883
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Entry
108940883 CDS
T04919
Symbol
rora
Name
(RefSeq) nuclear receptor ROR-alpha isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfm03000
]
108940883 (rora)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sfm03310
]
108940883 (rora)
Transcription factors [BR:
sfm03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
108940883 (rora)
Nuclear receptors [BR:
sfm03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
108940883 (rora)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
AAA_17
Motif
Other DBs
NCBI-GeneID:
108940883
NCBI-ProteinID:
XP_029112017
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Position
11:15786932..15998405
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AA seq
519 aa
AA seq
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MESPPDPASDPGNSATEPATPVRDTPVNLETLRKAEHQAPVRRQSCSSTNRGISVTKKTH
TSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNCLIDRTSRNR
CQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQRDHQQQPGEAEPLTP
TYGLSASGLTELHDDLSGYMDGHTPDGGKPDSAINSFYLDIQPSPDQSGLDINGIKPEPI
CDFAPGSGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREELQQMTWQAFL
QEEMENYQNKPREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVV
FVRMCRAFDSQNNTVYFDGKYAGPDVFKSLGCDDLISSVFEFGKNLCSMHLSEDEIALFS
AFVLMSADRSWLQEKVKVEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCSRH
TEKLTAFKAIYPDIVRTHFPPLYKELFGSDFEQSMPVDG
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggagtctcctcccgatccagcgagcgacccgggcaacagcgccacggagccggctacc
ccggtcagggacaccccggtaaacctggagactctccgaaaagccgagcaccaagccccc
gtccggaggcagagctgcagcagcacgaaccgaggtatttcagtgacaaagaagacacac
acttctcaaatcgaaattattccttgcaagatctgcggagataagtcgtctggcatccac
tatggtgtgataacgtgcgagggctgcaagggcttcttccggaggagtcagcagagcaac
gcggcgtactcctgcccccggcagaagaactgcctgatcgaccgcaccagccgcaaccgc
tgccagcactgccgcctgcagaagtgcttggccgtgggcatgtcgcgagacgctgtcaag
ttcggccgcatgtcgaagaagcagcgggacagcctgtacgcggaggtacagaagcaccgg
ctgcagcagcagcagcgggaccaccagcagcagccgggtgaggccgagccgctcacgccc
acctacggcttgtccgccagtgggctcaccgagctgcatgacgacctcagcggctacatg
gacggccacacgccggacggcggcaagccagactcggccatcaacagcttctacctggac
atccagccgtcgccggaccaatcgggcctggacatcaacggcatcaagcccgagcccatc
tgcgactttgcgccagggtccggcttcttcccctactgctcgttcaccaacggggagacc
tctcccaccgtgtccatggcagagcttgaacatctggcacagaacatctccaagtcccac
atggagacgtgtcagtacttgagagaggagcttcagcagatgacctggcaggccttcctg
caggaggagatggaaaactaccagaacaagccccgggaagtcatgtggcaactgtgtgcg
atcaagattaccgaggctattcagtacgtggtggagtttgccaaacgcatcgatggcttc
atggagttgtgccagaatgatcaaatagtactcctgaaagcaggttctttggaggttgtg
tttgtgcgaatgtgccgtgccttcgactcccagaacaacaccgtctactttgatgggaaa
tatgcagggcctgatgtcttcaaatcattaggctgcgacgacttgatcagctccgtcttt
gagtttggaaaaaacctgtgttctatgcacctgtctgaggacgagatcgccttgttctct
gcgttcgtgttgatgtcggcagatcggtcctggcttcaggagaaggtgaaggtggagaaa
ctgcagcagaagatccagctggcccttcagcacgtcctgcagaagaaccacagggaggac
gggatactaacaaagttgatatgcaaagtgtcgacactgcgagcactgtgcagcaggcat
acagagaagctgacggccttcaaagcaatatacccagacattgtgcgcacccacttcccc
ccgctgtacaaggagctgttcggctcggacttcgagcagtcgatgcccgtggacggctag
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