Scleropages formosus (Asian bonytongue): 108940887
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Entry
108940887 CDS
T04919
Symbol
dennd4a
Name
(RefSeq) C-myc promoter-binding protein isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfm04131
]
108940887 (dennd4a)
Membrane trafficking [BR:
sfm04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
108940887 (dennd4a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
DUF2464
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
108940887
NCBI-ProteinID:
XP_029112040
LinkDB
All DBs
Position
11:complement(16781901..16840343)
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AA seq
1916 aa
AA seq
DB search
MMDDKGPRVADYFVVAGLTDTSKPLDEEIHFDDVCHKTARPKAPITDIAVVMRSLGEEVP
QGYVCVETTPSGLSADLNSGSLMGPQIFLCYRRGRDKPPLTDLGVLYEWKERLKQGCHII
QTTPSGRPANISSTSSQRIYITYRRAPESQPHASLAVTDICIIIPSKGETPPHTFCRVDK
NLNSSMWGSSVYLCYKKSVAKTNTVAYKAGLLCRYPEEDYESFPLPESVPLFCLPMGATI
ECWPSQTKYSLPVFSTFVLTGASGEKVYGAAIQFYESYPQERLTDRQRLQLGLPTGERRP
VSSRAVHTNKCICLLSHWPFFDAFRKFLTFLYRYSISGPHVLPIEKHISHFMHKVPFPSS
QRPRILVQLSPHDSLLLSQPVSSPLPLSGGRFSTLLLNLGPENAVTLLVFAVTEHKILVH
SLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGVDSRYFDLYEPP
PDVSCVDLDTNTISQNEDKRALTWKVLPKKACKNLMNTLNNLYQQLAEGQQRPREDGLME
LAMSDYDFNCGKSLQTLELEIQEAFLRFMAAILKGYRSYLRPITQAPSEKATDASSLFDL
QGFLKSRDRSHQKFYSLMTKTQMFIRFIEECSFVSDKDASLAFFDDCVDKVDGDRPEETR
LIELDESHRSEHTVFITPPELPPLPEGEEYPQCYSYNGFPVLSLELFDPPEGLRTPASRL
TSRHSCPTSPAPMFRRTKQEIKSAQKIAKKYSSIPQMWSKCLLRHCYGLWFICLPAYVKV
CHSKVRALRTAYDVLRKMQAKKLQPPDEVCYRVLMQLCGQYGQPVLAVRVLFEMKKAGVQ
PNAITYGYYNKAVLESTWPSSTRGGYFLWMKLRNVVLGVTQFRRALKKQQSNPTQTPLSD
GSDLDAVSHGSLDSSNDTNTAEQGPFATDLIKVDSADDRSSTGGQSDLGYNSLSKEEARR
GESDVQDRALEKEDKKESDSSSLSESESAKGSGDCLPQLDFPNVSGPFQPRAGIVRSNCP
YDGTAKDANDTSTDHVAGLLFTSSLEEIGLVQGSGLRRRHKSAVEEGQGRSDWPGVRGRS
LSGDTAGGTVLGLGMTRGETDPVRIAENLGADAKILSATLRKSARPNSLDVGRHEGGPRG
GKLDSAARRHSHKARPERDSSDEDKMDTAAIFDLEDLDEERREGPSKAGQSCSKGQRKRA
AERSVSTGGVVVARTGIRAGFDPLSLMAAETEREADGGGASTPTARRDLAEEIEMYMNNM
GSPLSSRAPSMDLQDPSSPQLRGSPSPRRSSLPPGSPQPAAVPRSRTCPSRPRDRLWSSP
TFSQGSPRRERDPCANLASPSPSSFALDTLLTPTLDVFKSSVFSAGKGVAEKASRWYSRF
ATYTTPTKDANYDRASVSSLGTGDADCSSLADEESCLEPDGPGPTSPQRNGILGPKRSPH
RTRLESPTPQTSSAQKPPHPGVVSPSSFPLPDKSELGSSRYTSNTSIFQNYAMEVLISSC
SRCKTCDCLVYDEEIMAGWTADDSNLNTTCPFCGNPFLPFLNVEIRDLRGPGRFFLKSSP
SAEEAVSSSFSVSTGLGTGTSTLSTPCPTMMLSPRSPQITMHECPSNNSRSSSLGYSVAR
CVEIPMERRQGAVSPEPTMVRSVSEFGPMEEPLRTSLCTTGSLPCRLNEATDPLSMDWRL
HNPDPVTVPYLSPLVLWKELESLLENEGDQVISASDVVDHHPIIFWNLVWYFRRLDLPSN
LPGLILTSEHCNRGSQVPRHWMSEDSKHVLIQILWDNLKLHQDPIQPFYILWNTYHLNYS
VSWPVREEEELFGKELLQSVVRSIQKNDVYRPMSQVLQLLGQKLGVKRQRSLYRDILFLS
LVALGKDNIDIDAFDREYKMAYDRLTPSQVKLTHNCDRPPSAGVMECRKIFGEPYL
NT seq
5751 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgacaaagggccccgtgtagcggactactttgtggtggccggcctgacggac
acctccaagcccctggacgaggagatccacttcgacgacgtctgccacaagacggcccgg
cccaaggcacctatcacggacattgccgtggttatgcgctccttgggggaggaagtgccc
cagggttatgtttgcgtggagaccactccctctggcctctctgctgacctcaacagtggc
agcctcatggggccccaaatctttctgtgctacaggaggggccgggacaagccccccctt
actgaccttggggtcctctatgaatggaaggagaggctgaaacagggatgtcacatcatc
caaaccacgccctcgggtcgcccggccaacatcagcagcacctcctcccagcgcatatac
atcacataccggcgtgcccctgagagccagccccatgcctccctggctgtcaccgacatc
tgcatcatcatcccaagcaagggcgagacaccccctcacaccttctgcagggtggacaag
aatctcaatagcagcatgtggggctcctcggtttacctgtgttacaagaaatctgtggcg
aaaaccaacaccgttgcgtacaaagcaggtctgctgtgcaggtaccccgaggaggactac
gagtccttccccctgcctgagtccgtccctctcttctgcctccccatgggtgccaccatt
gaatgctggccctcccagaccaagtactccctccccgtcttctccacctttgtgctgact
ggtgcctctggggagaaggtctacggagcggccatccagttctacgagtcatacccgcag
gagcgtctgacagaccggcagcggctgcagcttggcctgcccaccggagagcgccgtccg
gtcagctcgagggccgtacacaccaacaagtgcatctgcctgctgtcccactggcccttc
ttcgacgccttccgcaagttcctcacgttcctgtaccgttactctatctctggaccccat
gtcctgcccatagagaagcacatctctcacttcatgcacaaggtgccgttcccctcctcc
cagaggcctcgcatcctggtgcagttgtctcctcatgacagcctgttgctgagccagccc
gtgtcctctcctctacctctcagcggcgggcggttctctacgctgctgctgaacctgggc
ccggagaacgccgttaccctgttggtgtttgccgtcaccgagcacaagatcctggtgcac
tcgctgcggccggccgtgctaaccagcgtgaccgaggcgctggtgtcgatgatcttcccc
ttccactggccgtgtccctacatccctctgtgcccccttgcgctggcagatgtgctcagc
gcgccgtgcccgttcatcgtgggcgtggactcccgctactttgacctttacgagcctccg
ccggacgtcagctgtgtggacttggacaccaacaccatctcccaaaatgaggataagagg
gcactgacgtggaaggtccttcccaagaaagcctgcaaaaatctgatgaatactctgaat
aacctctaccagcagctggctgaaggtcagcagaggcccagggaggatggattgatggag
ctggccatgagcgactatgatttcaactgtggaaagagcctccagaccctggagttggag
atccaggaagccttcctgcgcttcatggcggccatcctgaaaggctaccgctcctacctg
cggcccatcacccaggcgccctcggagaaggccacggacgcaagctccctgtttgacctt
caaggcttcctgaaaagccgcgaccgttcccaccagaagttctattccctgatgacgaag
acgcagatgttcatccggtttatcgaggagtgctccttcgtcagcgacaaagacgccagc
ttggctttcttcgacgactgcgtggacaaggtggacggcgatcggccggaggagaccagg
ctcatcgagctggacgagtcgcaccgcagcgagcacaccgtcttcatcacccccccggag
ctgccaccccttcccgaaggagaggagtatcctcagtgttacagctacaacgggtttccc
gtcctgagcctggagctctttgaccccccggagggcctgaggacccccgcctcgcgcctc
acctctcgacacagctgccccacgagtccggcacccatgttccgccgaaccaagcaggaa
atcaagtcggcgcaaaaaattgcgaagaagtactcgtccatcccgcagatgtggtccaag
tgcctgctccgccactgctacggcctgtggttcatctgcctgcccgcttacgtcaaggtg
tgccactccaaggtgcgggcgctgcgcaccgcctacgacgtgctgaggaagatgcaggcc
aagaagctgcaacccccagatgaggtttgctaccgggtgctgatgcagctgtgcggacag
tacggacaacccgtgttggccgtgcgcgtcctcttcgagatgaagaaggccggagttcag
cccaacgccatcacctatggttactacaacaaggctgttttggaaagcacctggccatcc
agcacccgggggggttacttcctctggatgaagctgaggaatgtggtgttgggcgtgacc
cagttcaggcgggcgctgaagaagcagcagtcgaaccccactcagacccctctctcagat
ggcagcgacctggacgccgtcagtcacggcagcctggatagctctaatgacactaacacg
gcggagcagggccccttcgccactgacctaatcaaagtagattccgctgacgatagatct
agcacaggggggcagtcggacctgggctacaactcgctgtctaaagaagaagcgaggagg
ggtgagagcgacgtgcaggacagagccctggagaaggaggacaagaaggagagcgattcc
agctcgttgtcagagagcgagagtgctaagggcagcggagactgccttccgcagctggac
ttccccaacgtcagcggccccttccaaccccgtgccggcatcgtgcgcagcaactgtccc
tacgacggcacagccaaagacgctaatgacaccagcacagaccacgttgctggcctgctc
ttcacctcctccctggaggagattggactggtccaaggcagcggtctgcgccggaggcac
aagagcgctgtggaggagggccaggggcgttcggactggcctggagtcagaggtcgcagc
ctcagcggagacacggccggcggcacggtactgggcctgggcatgactcggggcgaaacg
gaccccgtcaggatcgccgagaatctgggcgccgacgctaagatcctctccgcaacgctg
cggaagagcgccaggccgaactccctggacgtgggacggcacgagggcggcccccggggt
ggaaaattagactcggccgcccgcagacacagccacaaagcacgcccggagagggactct
agcgacgaagacaaaatggacacggctgccatcttcgacctggaagacctggacgaggag
aggagagaggggccgtccaaggcggggcaaagctgtagcaagggccagcgaaagagggct
gcggagcggagcgtgagcaccggtggcgtggtggtggcgaggaccggcatccgggccggt
ttcgacccgctgtctctgatggcggccgagacggagcgggaggcggacggcgggggcgcc
agcactcccacggcccgccgcgatttggctgaggagatcgagatgtacatgaacaacatg
ggaagccccctgagcagtcgggcacccagcatggatctgcaggacccctcgagcccccag
ctccgcggcagcccctcgccccggcgttctagcctgccccccggctccccgcagcccgcc
gccgtgccgcgctctcgcacctgcccttcgcgaccccgcgaccgcctctggtcctcgccg
actttctctcagggcagcccgcgcagggaacgggacccctgcgcgaacctggcctcgccc
tcgccctcctctttcgccctggacaccctgctcaccccgacgctggacgtcttcaaaagc
agcgtcttctctgcgggaaagggcgtggcggagaaggctagtcgctggtactcccggttc
gccacgtacaccaccccgaccaaggacgccaactacgaccgagctagcgtgtcctctctg
ggcacgggagatgcggactgctcctccctcgcggacgaggagtcctgcctagagcccgat
ggcccggggcccacctccccccagcgcaacggcattttgggtcccaagaggagccctcac
agaactcggctggagagccccaccccgcagaccagctccgcgcagaagcccccccatcca
ggtgtggtgtctccctccagcttcccccttccagacaaatcagaactggggtcctctcgc
tacaccagcaacaccagcattttccagaattacgccatggaggtgctgatctccagctgc
tcccgctgcaagacctgcgactgcctggtatacgacgaggagatcatggccggctggacg
gccgacgactccaacctcaacaccacttgccccttctgtgggaaccccttcctgcccttc
ctcaacgtggagatccgggacctccgtgggccggggaggttcttcttgaaaagcagtcca
tctgctgaagaagctgtgtcgtcctccttctccgtatccacgggtctgggtacagggaca
tctacgctgtccacgccctgtcctaccatgatgctttctcctcgctcaccccaaatcact
atgcatgagtgtcccagcaacaacagccggagtagctcactagggtactctgtagctcgc
tgcgtcgagatcccgatggagcgacgccagggcgccgtgtctccggagcccaccatggtg
cgcagcgtcagcgagttcggacccatggaggagccgctcaggaccagcctgtgcaccacg
ggcagcctcccctgtcggctcaacgaggctacggaccccctgagcatggactggcgcctc
cacaatcccgaccccgtgacggtgccgtacctaagccctttggtactctggaaggagctg
gagagtctgctggagaacgagggggaccaggtgatcagtgcatcagacgttgtggaccac
caccccatcatcttctggaacctggtgtggtatttccgccggctggacctccccagcaac
ttgccaggcctcatcctgacatcagagcactgcaaccgcgggtcgcaggttcctcgacac
tggatgtcggaggatagcaaacacgtgctgatccagatcctgtgggacaacctgaagttg
caccaggaccccatccaacctttctacatcctgtggaacacataccacctgaactactcg
gtgagctggccggtgcgggaggaggaggagcttttcgggaaggagctgctccaaagcgtg
gtgaggagcatccagaagaacgacgtgtaccgacccatgagtcaggtcctccagctgctt
gggcagaagctgggcgtcaagaggcagaggagtttgtacagagatattttgtttttgtcc
ttggtggctctgggaaaggacaacattgacattgatgcttttgaccgcgagtacaagatg
gcatacgaccgactcacacccagccaggtcaagctgacgcacaactgtgaccggcccccc
agcgccggggtcatggagtgccgcaagatttttggcgaaccgtacttgtga
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