Scleropages formosus (Asian bonytongue): 108941227
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Entry
108941227 CDS
T04919
Symbol
lrp4
Name
(RefSeq) low-density lipoprotein receptor-related protein 4
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfm04131
]
108941227 (lrp4)
Membrane trafficking [BR:
sfm04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
108941227 (lrp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
SGL
Vgb_lyase
cEGF
EGF_LRP2
DUF5050
EGF_CA
EGF_3
Syndecan
Motif
Other DBs
NCBI-GeneID:
108941227
NCBI-ProteinID:
XP_018619430
LinkDB
All DBs
Position
11:complement(18595379..18674485)
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AA seq
1900 aa
AA seq
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MQLVWVLCGILLTVLLCGQAGAAGSTGCSCGRNHFTCAVSAFGECTCIPAQWQCDGDNDC
GDHSDEDGCMLPTCSPLDFHCDNGKCIRRSWVCDGDNDCEDDSDEQDCPPRECEEDEFHC
QNGYCIRSLWHCDGDNDCGDNSDEQCDMRKCSDKEFRCTDGSCIAEHWYCDGDTDCKDGS
DEENCPSDVMTATCSVEEFQCAYGRCILDIYHCDGDDDCGDWSDESDCSSHQPCRSVEFM
CSSGMCVNAGWRCDGEFDCDDQSDEKNCTTSMCTTEQFRCASGRCVRLSWRCDGEDDCSD
GSDEDGCEKTDMPLPDNPPCAPDQFLCGNGRCIGLRKVCNEVSDCGDGTDERPIQECRQR
SGDGNCNTNNGGCSQKCQMTRGLVQCTCHTGYRLAEDGRSCDDVDECAEEGYCSQGCTNA
EGGFQCWCVQGYELRPDKRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIA
LDFHHSKKLVFWSDVTLDRIMKANLNGSNVEEVVSTGLESPGGLAIDWIHDKLYWTDSGT
SRIEVANLDGTHRKVLLWKSMEKPRAIALHPIEGKIYWTDWGNTPRIEYANMDGSNRRVI
ADTHLFWPNGLTIDYAGHRMYWVDAKHHVIERADLDGRNRKAVISQGLPHPFAITVFEDS
LYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPTGGRNRCGSNNGGCSH
LCLPSNKSYTCACPTGFKKIDNFNCAESLDQFLLFARRTDIRRISFDTEDKSDDVIPLAD
VRNAVALDWDAQDEYIYWTDVTTDSINRAKWNGSKQEVVVDTSLESPAGLAIDWVTNKLY
WTDAGTDRIEVSNADGSMRTVLIWENLDRPRDIVVDPIGGYMYWTDWGANPKIERAGMDA
SNRIVIISSNLTWPNGLAIDYQTERLYWADAGMKTIEYGNFDGSERKVLIGTQLPHPFGL
TLHESRIYWTDWQSKSIQSADKQTGLDRTTLAENLENLMDIHMFHRHRTFVQTPCMVNNG
GCSHLCLLAPPPKGSSCACPTGINLQVDGKSCSHGMNRFLIFARRTDIRMVSLDIPYFAD
VVLPMNGSMKNTIAIGVDPKEGKVYWSDSTLKKVSRASIDGSEYEDIISTGLMTTDGLAV
DAVGRKIYWTDTGTNRIEVANLNGSMRKVLIWQNLDSPRAIALYHEMGYMYWSDWGEHAK
LERSGMDGSDRVVLISNNLGWPNGLAIDKAGSQLLWADAHTERIEASDLNGANRRTLVSP
VQHPYGLTLLGPHIYWTDWQSRSIQRADKTTGGNSVIVRGNLPGLMDIQAVDRERPLGFN
KCGWKNGGCSHLCLPNSNGTSCACPTGILLKADGRSCEESPETYLLFSNRVSIRRISLDT
NDYTDVHVPVPELHNVISLDYDSVEGKVYYTDVSLDVIRRANLNGSNMETVISQGLKTTD
GLAVDWVARNMYWTDTGRNTIEVARLDGSSRKVLINNSLDEPRAIAVFPSKGYLFWTDWG
HIAKIERAHLDGSDRKVLINTDLGWPNGLTLDYDTRRIFWVDAHLDRIESSDLNGKLRQI
LVSPVSHPFALTQQDRWIYWTDWQTKSIQRVDKHTGRSKETVLANVEGLMDIIVVSPQRQ
AGTNHCGVNNGGCTHLCFAKGNSFVCACPDEPDSRPCSTISGYVPTAAGSGTTSTAPPKV
ATDKTRSSPPMVNCTDKNLSLGACVKSNVITVPDGEGLHISYVIGGALTILAILILIVAF
IIYRHKKSKFADPGVSNLTYSNPSYRTSTQEVKIETVQKPPIYNQLRYKKETCNDNSYTK
EKIKIVEGICLLSSDELYWEDIKQIKPTRGGLHVCMKTDTVSLQASSGSLDDTETEQLLQ
EEQSECSSINTAPVATPERHAVLPDTGWAQPCKPSTESEV
NT seq
5703 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttgtttgggtgctttgcggcattctcctgactgtgttgttgtgcggtcaagca
ggagcagctggcagcacaggatgctcctgtggccgaaatcactttacctgtgcggtgagt
gcttttggggagtgcacctgtatcccagcgcagtggcagtgtgatggggacaatgactgc
ggagaccacagcgatgaggatggctgtatgctgcccacctgttcccccctggacttccac
tgcgacaacggcaaatgcatccgccgctcgtgggtgtgtgatggagacaacgactgcgag
gacgactctgatgaacaggactgccctccacgggaatgcgaggaggacgagttccactgt
cagaatggctactgcattcgcagcctgtggcactgtgacggtgacaacgactgcggggac
aatagcgacgaacagtgcgacatgaggaaatgttcggacaaagagttccgctgcaccgat
gggagctgcatcgccgagcactggtactgtgatggtgacacggactgcaaggacggctcg
gatgaggaaaactgcccgtcggatgtgatgactgccacatgcagcgtggaggagttccaa
tgtgcctatggccgctgtatcctggatatctaccactgcgacggggacgatgactgcggg
gattggtccgacgagtctgactgctcctcccaccagccttgccgctcagtggagttcatg
tgcagcagtggcatgtgcgtcaacgctggctggaggtgtgatggcgagtttgactgcgat
gaccaatctgatgagaagaactgcaccacctccatgtgtaccactgaacagttccgctgt
gcatctggccgctgtgtccggctgtcatggcgatgtgatggcgaagatgactgctctgat
ggcagtgacgaagacggctgtgaaaaaacagacatgccactgccagataacccaccctgc
gcccctgaccaattcctgtgtgggaatgggcgctgcattggtctacggaaggtgtgcaat
gaggtcagcgactgtggtgatggcacagacgagaggcctatccaggaatgccgtcaacgg
tctggtgacgggaactgcaatacgaataacggtggctgctcccagaagtgccaaatgacc
cgtgggctcgtgcagtgtacctgtcatactggctaccggttggcggaagatgggaggtct
tgcgacgatgtggatgaatgtgcagaggagggctactgcagtcagggctgtacaaatgct
gaggggggcttccagtgctggtgtgtgcaggggtatgagctgagacctgacaaacggagc
tgcaaggctttgggtccagagccagtcctgctctttgccaatcggatcgatatccgtcag
gtgctgccacaccgctcggagtacacactactgctcaataaccttgagaatgccattgcc
cttgacttccatcacagcaagaagcttgtgttctggtctgacgtcacacttgaccgcatc
atgaaggccaacctcaatggcagcaatgtggaggaggtggtgtccactggcctggagagc
ccaggtggcctggccattgactggatccatgacaagttgtactggacagactcgggaacg
tctcgcatcgaggtggcaaatctggatggcacacacaggaaagtgctgctgtggaagagc
atggagaagccgcgtgccattgcccttcaccccattgaagggaagatctattggacagac
tggggtaacaccccacgtattgagtatgccaacatggacggctccaaccggcgggttata
gcagacacccaccttttctggcccaatgggcttacaatcgactatgccggacaccggatg
tactgggtggatgccaaacatcacgtgattgagcgggcggacctggatggcaggaacagg
aaagctgtcataagtcaaggcctcccccatccctttgccatcaccgtctttgaggacagt
ctttactggactgactggcacactaagagcatcaacagcgctaacaagttcactggcaag
aatcaggagatcatccgtaacaagctgcacttccctatggacatccacaccctgcacccc
cagaggcagcccacgggaggacggaaccgctgcgggagcaacaacgggggctgcagtcac
ctgtgtctgcccagcaataagagctacacctgtgcttgtcccacaggcttcaagaaaata
gacaacttcaactgtgctgagagtcttgaccagttcctgctttttgcccgaaggacggac
atccgtcgaatcagctttgacacagaggacaagtcggatgatgtcatcccactggcagat
gtacgcaacgccgtggcactggactgggacgctcaggatgaatacatctactggactgac
gtcaccactgactccatcaaccgggccaaatggaacggctcaaaacaggaggttgttgtt
gacaccagtctcgaaagtcctgctggcctggctattgactgggtgactaataagctgtac
tggactgatgcaggaacagaccggattgaggtgtccaacgctgatggcagcatgcgcaca
gtgctcatctgggagaacctagaccgacctcgagatattgtggtggaccccattggaggg
tacatgtactggacagactggggggctaaccctaagattgaaagagctggaatggatgcc
tccaatcgcattgtcatcatctcttccaacctaacgtggcctaatggcctggccattgac
taccagacagagaggctgtactgggctgatgctggtatgaagaccatagagtatggaaac
tttgatggatcagagagaaaggttttgattggcactcagcttccccacccatttggtcta
acgctccacgaaagcaggatctactggacagactggcagtccaagagtatccagagtgca
gacaaacagactggcctggatcgcaccacgctggctgagaacctggagaatctgatggac
atccacatgtttcaccgacaccgcacctttgtgcagaccccctgcatggtgaataatgga
ggctgcagtcatctctgtcttctggctccacccccaaagggttccagctgcgcttgtccc
acaggcatcaacctccaggtggatggcaagagctgctctcacggaatgaacagattcctg
atctttgctcggaggacagacatccgcatggtgtccttggatattccctactttgcagat
gtggtccttccaatgaatgggtccatgaaaaacaccattgccattggtgtggacccaaaa
gaaggtaaagtgtactggtctgacagcactttgaagaaggtcagcagagcaagtattgat
ggcagcgagtatgaggatattatctcaactgggctgatgaccacagatggattggctgtg
gatgctgttggccgtaagatatactggactgacactggcaccaatcgtattgaagtagct
aatttgaatggatccatgagaaaagttctgatctggcagaacctggacagcccacgggcc
attgcactctatcatgaaatggggtacatgtactggagtgactggggagagcatgcaaaa
ctggagcggtctggcatggatggatccgatagggttgtcttgattagcaataacttaggc
tggccaaacggcctagccattgacaaggctggatctcagcttctttgggctgatgctcac
actgagcgtattgaggcatccgacctgaatggagccaaccgacggactctggtgtcacca
gtccagcatccttatgggctcaccttgttgggcccacacatctactggactgactggcaa
agtcgcagcattcagagggcagacaaaaccactggtggaaacagtgtcattgttcgggga
aacctgccaggcttgatggacatccaggctgttgacagagagaggcccttaggcttcaat
aagtgtggatggaagaatgggggctgcagccacctgtgcttgcccaactcaaatgggacg
tcttgcgcctgccccacgggcatcctgctgaaggctgacggacgctcgtgcgaagagagc
cccgagacctacctgctcttctctaaccgcgtcagcatccgccgcatatccctggacacc
aacgattacacagacgttcacgtgcctgtgcctgagctccacaacgtcatctcgctggac
tacgacagtgtggaggggaaggtgtattacaccgacgtgtccctggatgtcatcagacgt
gcaaacctgaacggcagcaacatggagacagtcatcagtcagggcctgaagaccaccgac
ggcctggctgtggactgggtagctaggaacatgtactggacggatacgggccgcaacacc
atcgaggtggcccgcctggacgggtcctcccgcaaagtgctcatcaataacagcctggat
gaacccagggccatcgctgtgtttcctagcaaagggtacctattctggacagactggggc
cacattgccaagattgagagagcacatttggatggttccgaccgcaaggttctgatcaac
accgacctcggatggcccaatggactgacgttagactatgacacacgcagaattttctgg
gtggatgcccatctggaccgtattgaaagctcggacctgaatgggaaacttcgccagatt
cttgtcagcccggtttcccacccatttgccctcacgcagcaagatcgctggatttactgg
acggactggcaaaccaagtctattcagcgcgtagataagcacacggggcgcagcaaggag
acggttctggcaaatgtagagggattaatggacatcattgtggtgtcgccacagcggcag
gctggcaccaaccactgtggtgtgaacaatggtggctgcactcatctctgctttgctaag
ggcaacagctttgtctgtgcgtgtcctgatgagccggacagcaggccctgctccaccatt
tcaggttatgtccctactgctgctggcagtggcaccacaagcaccgcgccgcctaaggtt
gccacagacaaaacgcgatcaagccctccgatggtcaactgtacggataagaacctgagc
ctgggtgcatgtgtgaagagcaatgtgataactgtcccagatggggaaggcctacatatc
agctatgttattggaggagctctgactatcttggctatcctgattctcattgtagctttc
ataatttacagacacaagaaatcaaagtttgctgacccaggagtgagtaacctgacctac
agcaatccctcatacagaacatcaacgcaagaggtcaaaattgaaactgtgcaaaagcct
cctatttataaccagctccgatataagaaagagacctgcaacgacaacagctacactaag
gagaagatcaagatagtggagggaatctgtctgctgtccagcgacgagctttactgggag
gacattaagcagatcaagccgacacggggcggcctccacgtgtgcatgaaaacggacacc
gtgtctctccaggcaagcagcggctctctggatgacacagagacggagcagctcttgcag
gaggagcaatcggagtgttccagcatcaacacagcccctgtcgccacacccgagcgccac
gcagtcctgcccgacaccggctgggcccaaccctgcaaaccatccaccgagagcgaggtc
tga
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