Scleropages formosus (Asian bonytongue): 108941268
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Entry
108941268 CDS
T04919
Name
(RefSeq) LOW QUALITY PROTEIN: aggrecan core protein-like
KO
K06792
aggrecan 1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sfm00535
]
108941268
00536 Glycosaminoglycan binding proteins [BR:
sfm00536
]
108941268
04091 Lectins [BR:
sfm04091
]
108941268
Proteoglycans [BR:
sfm00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
108941268
Glycosaminoglycan binding proteins [BR:
sfm00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
108941268
Lectins [BR:
sfm04091
]
C-Type lectins
Lecticans
108941268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
I-set
EGF
EGF_2
Motif
Other DBs
NCBI-GeneID:
108941268
NCBI-ProteinID:
XP_018619494
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All DBs
Position
11:13078156..13100340
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AA seq
1427 aa
AA seq
DB search
MTTWLLLCVYLRIAAATITFEELSGIDPESTLSVSIPAETPLRSLLGGTLVVPCYFQDNT
VHDPGAPTIAPLSHRIKWSYVTKDKVSVILVATEGKVRVESHYLDRVTMVNYPMVPTDAS
MEITELRANDSGTYRCEVMHGIEDNYDTVQIQVQGIVFHYRAISTRYTLTFEKAKAACIQ
NSAVIATPEQLQAAYDDGFHQCDAGWLADQTVRYPIHEPRERCYGDKDEFPGVRTYGVRD
VNETYDVYCFAEKMSGRVFYSMSPDKFTFAEAEEQCLKLGAQLATTGQLYLAWKAGMDVC
SAGWLADRSVRYPINIARPQCGGGLLGVRTVYLYPNQTGYPLPDSRYDAICYEEDEEGSA
ITAALPDLQPTTEAGSGLLSVATITDVPEIFPKNATSESEAVGELVTQEPVNFTVTEGME
NITTDFIYVGDNVTELPLSPPPSVTEDYLNVTEIIDEEIIIPATAQPEVEAVFPLDNETE
PLLSATGVVFHYRAGSSRYALTFVEAQLACQSIGAVIASPEQLQAAFEAGFHQCDAGWLL
DQSVRYPIVFPRDKCSGDMKELPGVRSYGLRPAYERYDVYCYVDSLKGEVFHVSSPEGFT
YEEALSHCHGQNATLASTGDLYAAWKLGYDKCRPGWLLDRSIRYPINKPRPQCGGGKAGV
HTVYSSTNRTSYPDLYNKYDAYCFRVDLLALLNDTGRNITGIEEDLINITSITDLQRPVS
TSIAPPISVDVSGFGSADLVSGESGSSLDVSGIGSADFSGVASGESGDVSASGLSGEGSA
ISMTELEDKMVLSGNGSVSEGPEEAGQGSTEILTFPSGIGSGDFSGLPSGWSGDLSGDGS
ISGLGTEESGSSMFSASGESGEFSGLVSGSDWSGEIPGYSGLPSGFFPSGDISGLSGDLD
GSGDSVIILEDGSLVEILTSSTTTEEQIKEQVEFSASGDISGSAMPSGDVSGLASGVSGS
ASGSGLDLLDVTFVNSGFVDITRKPTREQEASGFVDYTSEDISGLHSGFSSGYPSGESGL
PDISGVSGLPSGEASGASASGDITLLTDEGMIEVSIAPTRTMELGKGPVEISGAGSGSLF
LSGSGDQASGVASGLGSGMKPSELPSVVLSSQSADQKLTISSAGPEEAFSELVESTAEYY
ITAPVPLAATTAPAVSLQTPAVMEEPASVDAPVDPCDPNPCGGGTCSVQDGIGVCQCPTG
LTGDACQFDVQSCEKGWEKFQGSCYLHFSERETWLDAEQRCRDLNSHLVSILTPEEQDFV
NSNAQDYQWIGLNDKMVENDFRWTDGSPMQFENWRPNQPDNYFNSGEDCVVMIWHENGQW
NDVPCMYHLPFTCKKASVLCGPPPEVKNARIFGKQKEIYEVNSMIRYRCNPGFTQRHLPL
VRCMADGQWERPQVQCIGPIGGSHSLHKRSIRSRSRSGSTKSWGKLR
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atgaccacttggcttttactctgtgtgtatttgcgcatagccgcagccacaataaccttt
gaagaactgtcaggtatagaccctgagagcactctgagtgtaagcatccctgcggagacc
ccactgcgctccttgctgggtggaacgctggtcgtgccctgctacttccaagacaacact
gtccatgaccccggtgcccccacaattgcccctctctcccatcgcatcaaatggagctat
gtgaccaaggataaagtgtcagtcatcctggtggccacagagggcaaggtgcgggtggag
tcacactacttagacagagtcaccatggtgaattaccccatggtgcccacagatgcctcc
atggagatcacagagctgcgtgccaatgattccggcacataccgttgcgaggtcatgcat
ggcattgaggacaactatgatacagtccagattcaagttcaaggaattgtgttccactat
cgagccatctccacccgctacaccctcactttcgagaaggccaaggctgcttgtatccag
aatagtgctgtgattgctactccagaacaactccaggctgcttacgatgatggttttcac
cagtgcgatgctggctggcttgctgaccagactgttaggtatcccattcatgagccacga
gaacgttgctatggcgataaagatgagtttcctggagttcgaacatatggagtgagagat
gtcaatgaaacctacgatgtgtattgtttcgcagaaaagatgtcaggcagagttttctat
tccatgtcaccggataaatttacatttgctgaagcagaggagcagtgtttgaagctgggt
gctcagctggccaccaccgggcagctgtacttggcttggaaggctggcatggacgtgtgc
agtgctggctggcttgctgaccggagtgtccgttaccccatcaatattgcccggcctcag
tgtggagggggactccttggtgtacgcactgtgtacctctacccaaaccagacaggttac
cctctcccagattcccgctacgatgccatctgttatgaagaagatgaggagggttcagcc
atcaccgctgcgctcccggacctgcagccaacaaccgaggcaggcagcggcctgctgagt
gtggccaccatcacagacgttcctgagatcttcccaaagaatgccacctctgagagcgag
gcggttggggagctagtgacacaggagccagtgaacttcacagttaccgagggcatggag
aacatcaccactgacttcatctatgtaggggacaatgtcactgaactgcccctgtctccg
ccacccagtgtaacagaggactacctgaatgtcactgaaataatagacgaggaaatcatc
atcccagcaacagctcagcctgaagtggaggcagtgtttccccttgacaatgagactgag
cctctgctgtctgccacaggtgttgtgttccactaccgtgccggctcctcccgctatgcc
ctcacctttgtagaagcacagctggcttgtcagagtattggtgctgtcattgccagcccc
gagcagctccaggctgcctttgaggctgggttccatcagtgtgatgctggctggctcctt
gaccagtcagtgaggtacccaatagtttttccacgagacaaatgctcaggtgacatgaag
gagttgcccggtgtgaggagttatggcctgcgaccggcgtatgaacgatatgatgtatat
tgctatgtggacagcctaaagggggaggtattccatgtcagttctccagagggcttcaca
tatgaagaagctctgtcccattgccatggtcagaatgccacactggcttccacaggggac
ctctatgctgcctggaaactaggctatgacaaatgtcggccaggctggctgcttgaccgc
agcatccgatatcctattaacaaacccaggcctcagtgcggaggtggaaaagcaggagtc
cacactgtttacagctccaccaaccggacgagctatcctgacctgtacaacaaatatgat
gcgtactgcttccgggttgatctgttggcgcttctcaatgacactggacggaatataact
gggattgaagaggatctgatcaatattacatcaataacagatctacaaagaccagtgagc
acttcgattgctcctcccatctctgtcgatgtctctggctttgggtcagcagacctggtc
tcaggagagagtggcagctccctagatgtttctgggattggaagtgcagatttttctggt
gtggcatcgggtgagagcggagacgtctctgcttcaggcctgagcggagaagggtcagcc
attagcatgactgaactggaagacaagatggtactgtctggcaatggctcggtatctgag
gggccagaagaagctggccagggaagcactgagatcctgacattcccctctggtataggt
tcaggagacttcagcggactcccttcaggctggagtggggacctgtcaggggatggcagc
atctcagggttgggcactgaggaaagtggctcctccatgtttagtgcctctggtgagagt
ggagaattctcaggactggtgtctgggtcagactggagtggggaaattcctggatacagt
gggttaccatctggattcttcccctcaggagatatcagtggtttgtctggagaccttgat
ggtagtggggattctgtgatcattttggaagatggcagtttggtagaaatattgacctca
agtacgactacagaggagcaaattaaagaacaggtggaattcagtgcttctggagacatc
tccggatctgcaatgcccagtggtgacgtcagcggtttagcttctggagtcagtggctct
gcatctggaagtggacttgacttgcttgatgtgacctttgtgaattctggtttcgtcgac
ataacaaggaagccaacaagagagcaggaagcttctggatttgttgattatacttcagag
gatatcagtggacttcactccgggttttcctctggttatccttctggggaatccggcctc
ccagacataagtggagtttctgggcttccatcaggggaggcctcaggtgcatctgccagt
ggggacattactctgctgactgatgaggggatgatagaagtctccattgctcccacaaga
accatggagctcggcaagggccccgtggagattagcggtgcaggcagtggatctctattt
ctgtctggaagtggggaccaggccagtggagtcgcatcaggactgggctcaggaatgaag
cctagcgaactcccgtccgtggtcttgtcctctcagtctgcagatcagaaactgaccatc
agcagcgcaggcccagaggaggccttctcagagttggtggaatccactgctgaatattat
atcacagctcctgtccctctcgctgccaccacagccccagctgtctctcttcagactcca
gcagttatggaggaacctgcatcagtagatgctcctgttgatccgtgtgatccgaatcca
tgtggcggtggcacatgttctgtgcaggatggcattggggtctgtcagtgcccgactggt
ctgactggagatgcgtgccagtttgatgtacaaagctgcgaaaaaggctgggagaagttc
caaggcagctgctacttgcacttctcagaacgagagacctggctggatgcagagcagcgc
tgtagagacctgaattcccaccttgtcagcatcctcactccagaagagcaggactttgta
aactccaatgcgcaggactaccagtggattggactcaatgacaagatggtggagaatgac
ttccgctggactgatgggtcccccatgcaatttgagaactggaggccaaaccagccggac
aactactttaactctggcgaagactgcgtggtgatgatttggcatgagaacggccagtgg
aatgacgtaccctgcatgtaccacctacccttcacatgcaagaaggcttcagtgttgtgt
ggcccccctccggaggtgaagaatgctagaatcttcgggaaacagaaggaaatctatgaa
gtgaactccatgatccgctatcggtgcaatcctgggttcacacagcgccacctgcctctg
gtgcgctgcatggcagacgggcagtgggagagaccgcaagtccagtgcataggcccaatt
ggcggcagccacagtctacacaaaagatccatcaggagtcgatcaagatcaggcagcacc
aaatcttgggggaagctccgctaa
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integrated database retrieval system
