Scleropages formosus (Asian bonytongue): 108941551
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Entry
108941551 CDS
T04919
Name
(RefSeq) integrin alpha-IIb-like
KO
K06476
integrin alpha 2B
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04510
Focal adhesion
sfm04512
ECM-receptor interaction
sfm04810
Regulation of actin cytoskeleton
sfm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108941551
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108941551
09142 Cell motility
04820 Cytoskeleton in muscle cells
108941551
04810 Regulation of actin cytoskeleton
108941551
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sfm01009
]
108941551
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfm04147
]
108941551
04515 Cell adhesion molecules [BR:
sfm04515
]
108941551
04090 CD molecules [BR:
sfm04090
]
108941551
Protein phosphatases and associated proteins [BR:
sfm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108941551
Exosome [BR:
sfm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108941551
Cell adhesion molecules [BR:
sfm04515
]
Integrins
Integrin alpha subunits
108941551
CD molecules [BR:
sfm04090
]
Proteins
108941551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_2
Integrin_A_Ig_3
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
108941551
NCBI-ProteinID:
XP_018619819
LinkDB
All DBs
Position
8:28895390..28915742
Genome browser
AA seq
1053 aa
AA seq
DB search
MEVGKSPRLPRAAVRLLLLVLCALSRRNLALNLNGDNVTFYSGPEGSYFGFSLDFYQFGN
KSISVVVGAPKASTEQYDVTEGGAVFLCPWSSEGGSCYDLVFDTRGDEKHFYAGSAAVVS
KSYQWFGASVRAGQNHILACAPLYHWNVIDGLDESGMTPVGNCILRDMNTGKLAKFSPCK
DTTMDKVYEDRGNYDDRRYCEAGFSSDITKEGKILLGAPGGYFFQGQVIAASVNSIYKSM
ESMDPVQFVEGITFSPEQGSYDTYRGYSVATGEFTGDSSTDYVVGDPNDRNTAGSVKIYN
GMAWDSLRVYRTFFGTQVASYFGHAVAVTDINSDGRDDVLVGAPLFMERLSSAQLHEVGQ
VCVYLQRKRSTFSSKANQKLLGADVYGRFGSAIAPLGDIDQDGFNDVAVGAPFSGDGGRV
FVFRGQAEGLMLQHSQVLPSPFQALAAPAAFGFTLRGGTDIDTNGYPDLIVGAWGADKIA
VYRARAVVRAKAHISLDPDFLNPDMKTCQLPRVNSAVSCFTIKVCVSVSGHKIPQQIVLD
SELQLDKMKQKTARRTLLLQSSQPQEHFSLTIQSSAGTACKNLTAYLRHESEFKDKLSPI
FIALSYKLGGSSEVVLHGQTSAVVQSRIILDCGDDNVCVPELKLAVKAANDRLLIGDENP
VLLLVEAENRGEGAYETELHVHPPAHTHYQSVLSDKEGFSRLVCVQKKSNETVTVTCDLG
NPMKHGQKLQAGLYFSVGNLEDVESRVSFQIQIKSKNIQNPNSNLVNLRINVSAVATLEM
RGGSSPMECVLPIANWKPVEEPKSLEEVGPLVEHVYELRNLGPARVNARVEVEFPTSRQG
DLLLYVFANASEESLTCRSDSADIDPLRLFEEEDASNGTAAVVHRINKREAEQHDAQPKE
TIHVNCTGGDTCVRFVCEARDLDRGESAVVKVMSRLWVQTFLKSPYVGFVLHSRAYYKLL
GMPSKIQPEVLLHGHSETHTAVVWRSPDGEKEVPVWWIVVAVISGLLLLALIIFILQKVG
FFKRMRPPSEGEDTCELQPEQLEYAEMPPSTGT
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggggaagagtccgcggctgccccgtgccgccgtccgcctcctcctcctcgtc
ctgtgcgctctttcgcgtcgcaatctggccttaaacctcaacggggataatgttacgttc
tactccggacccgaagggagttattttggattttccctggatttttatcagttcggcaac
aaatccatcagcgtggtggtcggggctccgaaggccagcacagagcagtacgacgtgacg
gaaggcggagccgtcttcctctgtccctggtcttcagagggtggctcctgctatgacctg
gtctttgacactcgcggtgacgaaaaacacttttacgccggttcggccgcagtcgtgtcg
aaatcgtaccagtggtttggggccagcgtgcgggccggacagaaccacatcttggcttgt
gcacccctttaccactggaatgtgatcgatggcctggacgagtcgggaatgacaccggtg
ggcaattgcattctgcgggacatgaacactgggaagctggctaagttctccccctgcaag
gacaccacgatggacaaggtgtatgaagacaggggtaactatgacgacagacgatactgc
gaagccggattcagctcggacattacaaaggaaggaaagatccttcttggggctccaggg
ggatacttctttcaaggtcaggtcatcgcagcgagtgtgaacagcatctacaaaagcatg
gagtctatggaccctgtgcaattcgtggagggcatcaccttctcgccggagcagggcagc
tatgatacctacagaggttactcggtggccacgggggagttcacgggggactccagcaca
gactacgtcgtcggcgatccgaacgaccgaaacacagccggttcagtgaaaatctacaac
ggaatggcgtgggactctttaagagtgtatcgcaccttcttcggcacgcaggttgcctca
tacttcggccatgctgtcgcggtgacggacatcaacagcgatgggcgggacgacgtgctg
gtgggagcgcctctcttcatggagcgcctgtcctccgcgcagctccacgaggtgggccag
gtgtgcgtgtacctgcagaggaagcgctccaccttctccagcaaggcgaaccagaagctt
ctgggcgccgacgtgtacgggcgcttcgggagcgccatcgcccccctgggagacatcgac
caggacggcttcaacgacgtcgcagtgggggcccctttctcgggtgacgggggccgggtg
ttcgtcttcaggggtcaagccgaggggctgatgctccagcactcccaggtgctgcccagc
ccattccaggcgctcgcagccccggcagccttcggattcaccctgcgggggggcaccgac
atcgacaccaacggctacccagatctcatagttggagcgtggggtgccgacaagattgcg
gtgtacagagcgcgggctgtagtgcgagccaaagctcatatttccctggaccctgacttc
ctgaacccggacatgaagacctgtcagcttccaagagtcaacagcgctgtctcctgcttc
acgatcaaggtgtgtgtcagcgtgtccggccacaaaatcccacagcagatagtgctggac
agcgaactccagctagacaagatgaagcagaagacagccaggagaacccttctcctgcag
tccagtcagcctcaggagcacttctccctgaccatccagagctctgcaggcacggcctgc
aaaaacctgaccgcctacctacggcacgagtccgagttcaaggacaagctgagccccatt
ttcatcgccctctcctacaagctgggagggtcatctgaggtcgtgctgcatggacagaca
tctgcggtggtgcagagccgaatcatcctggactgtggggacgacaacgtctgcgtccct
gagttgaagctggcagtcaaggcggccaacgaccgtctcctcatcggggacgagaacccg
gtgctgctgctcgtcgaggcggagaaccgtggggagggggcctacgagacggagctgcac
gtccacccgcccgctcacacacactaccagagtgtgctgagcgacaaagagggcttcagc
cggctggtgtgtgtccagaagaagagcaatgaaaccgtaaccgtgacctgcgacctggga
aaccccatgaagcacggccagaagctgcaggcgggcctctacttcagcgtgggtaacttg
gaagacgtggaaagccgtgtgtcttttcaaatacaaataaaaagcaagaacattcagaac
ccaaacagcaacctcgtcaacttgcgcatcaacgtcagcgccgtggcgactctggaaatg
cgcgggggctcctcccccatggagtgcgtcctgcccatcgccaactggaaaccggtggag
gaacccaagagcctggaggaagtgggcccgcttgtggaacacgtgtacgaactgaggaac
ctgggcccggcgcgggtcaacgccagggtggaggtggagtttcccacctcccgccagggg
gacctcctgctctacgtgttcgccaacgcctcggaggagtcgctcacctgccgcagcgac
tccgccgacatcgaccccctcaggctcttcgaggaagaagacgcctcgaacgggaccgct
gccgtagtccatcgcatcaacaagcgggaggccgagcagcacgacgcccagccgaaggag
acgatccacgtgaactgcacaggtggagacacctgcgtgaggttcgtctgcgaggcgcgg
gacctggacaggggtgagagcgctgtggtcaaggtcatgtccaggttgtgggtgcagacc
ttcctgaagagtccctatgtagggtttgtactccattccagggcttattacaaacttctg
ggcatgccctccaagatccaaccagaggtcctccttcacggacattctgagacccacaca
gcggtggtgtggaggagccctgatggggagaaggaggtgcccgtgtggtggattgtagtg
gctgtcatctctggcctcctcctgctggctctgatcatcttcatcttacagaaggtcggg
ttcttcaagcgtatgaggcccccgagcgagggagaggatacgtgtgagctgcaaccagag
cagctcgagtacgcagagatgccgccgagcaccggaacgtga
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