Scleropages formosus (Asian bonytongue): 108941554
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Entry
108941554 CDS
T04919
Symbol
shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm00260
Glycine, serine and threonine metabolism
sfm00630
Glyoxylate and dicarboxylate metabolism
sfm00670
One carbon pool by folate
sfm01100
Metabolic pathways
sfm01200
Carbon metabolism
sfm01230
Biosynthesis of amino acids
sfm01240
Biosynthesis of cofactors
sfm04981
Folate transport and metabolism
Module
sfm_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
108941554 (shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
108941554 (shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
108941554 (shmt1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
108941554 (shmt1)
Enzymes [BR:
sfm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
108941554 (shmt1)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
SHCBP_N
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
108941554
NCBI-ProteinID:
XP_018619823
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Position
8:complement(31730925..31736332)
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AA seq
483 aa
AA seq
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MASGDGGKLGAETWESHGRMMLEPLATSDAEVYDIIRKEKRRQTYGLELIASENFASRAV
LEALGSCMNNKYSEGYPGQRYYGGTEFVDELERLCQKRALDVYGLDPDKWGVNVQPYSGS
PANFAVYTAIVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPVTGYI
DYDRLEENARLFHPKLIIAGTSCYSRNLDYSRLRKIADDNGAYLLADMAHISGLIAAGVV
PSPFEYCDVVSTTTHKTLRGCRAGIIFYRKGVRSVDPKTGKETLYNLESPINQAVFPGLQ
GGPHNHAIAGVAVALKQALTPEFKTYQVQVLANCRALAGALVEKGYKVVTGGSDNHLILV
DLRPNGTDGGRAEKVLEACAIACNKNTCPGDKSALRPSGLRLGSPALTSRGLLEDDFRKV
ADFIHRGIQLTLEIQKNMDPKATLKEFKDVLAQSEKYRTKTKEIREEVEAFAGRFLMPGL
PEL
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccggcgatggcgggaagctcggtgccgaaacctgggagtcccacggccgcatg
atgctggagcccctggcgacgagcgacgctgaggtgtatgacatcatcaggaaggagaag
aggaggcagacgtacggcctggagctcatcgcctcggagaactttgcgagccgcgctgtt
ctggaggccctgggctcctgcatgaacaacaagtactcggagggctaccccgggcaaagg
tactatggtggcacggagtttgtggacgagctggagcggctgtgtcagaagagggcgctg
gatgtgtacggcctggaccccgacaagtggggggtgaacgtacagccctactccggctct
cctgcgaactttgcggtttacaccgccatcgtggaacctcatggaaggatcatgggtctc
gacctgcccgacggtggtcacctgacccatgggttcatgacggacaagaagaagatatct
gcaacatccatcttttttgagtcgatgccatataaggtcaatcctgtgaccggctacata
gactatgaccgtctcgaggagaacgcacggctctttcacccgaaactcatcatcgctggt
accagctgctactctcgtaacctcgactattcccggctgaggaagatcgccgacgacaac
ggggcgtacctcctggctgacatggcccacatcagcggcctgattgccgcgggagtcgtt
ccgtcccccttcgagtactgcgatgtcgtctccaccaccacgcacaagactctgagaggg
tgccgggccgggatcatcttctaccgcaagggggtccgcagcgtcgaccccaagaccggc
aaggagaccctgtacaatctggaaagcccgatcaaccaggcagtcttccctgggttgcag
ggagggccacacaaccatgccatcgcaggagtagctgtggcccttaagcaggcgctgacg
cccgagttcaagacctaccaggttcaggtgctggcaaactgcagagctctggctggtgct
ttggtggagaagggttacaaggtggtcacaggcggctccgacaatcacctcatactggtg
gatttgcgccctaacggcactgatggtggcagggcagagaaagttctggaggcatgcgcc
attgcctgcaacaagaacacatgtccaggtgataaaagtgccctacgtcccagtggtctg
aggcttggttctcctgccctcacatccaggggactcttagaagatgacttccgcaaagtg
gcagacttcatccacagaggtatacagctgactctggagatccagaagaacatggaccca
aaggcaacactgaaggagttcaaagatgtgttggcgcagagcgagaaataccgaacgaag
accaaagaaatcagggaggaagtggaggcttttgccggaagatttcttatgcctggcctc
ccagagctgtaa
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