Scleropages formosus (Asian bonytongue): 108941735
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Entry
108941735 CDS
T04919
Symbol
pold1
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03030
DNA replication
sfm03410
Base excision repair
sfm03420
Nucleotide excision repair
sfm03430
Mismatch repair
sfm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108941735 (pold1)
03410 Base excision repair
108941735 (pold1)
03420 Nucleotide excision repair
108941735 (pold1)
03430 Mismatch repair
108941735 (pold1)
03440 Homologous recombination
108941735 (pold1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfm03032
]
108941735 (pold1)
03400 DNA repair and recombination proteins [BR:
sfm03400
]
108941735 (pold1)
Enzymes [BR:
sfm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
108941735 (pold1)
DNA replication proteins [BR:
sfm03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
108941735 (pold1)
DNA repair and recombination proteins [BR:
sfm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
108941735 (pold1)
MMR (mismatch excision repair)
DNA polymerase delta complex
108941735 (pold1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
DNA_pol_B_exo2
divDNApol
Motif
Other DBs
NCBI-GeneID:
108941735
NCBI-ProteinID:
XP_018620048
UniProt:
A0A8C9RG34
A0A0P7US81
LinkDB
All DBs
Position
8:complement(32565630..32572196)
Genome browser
AA seq
1105 aa
AA seq
DB search
MEGKRVNGSPVTGGASQAKRSKVSGDWEDGPSLFEEELAMLDEAEMEAELREGQAGHDVI
PVGDLFSADLNPRWRRPQPPLLDSTADKLVFQQIEIDYYLGSPVDGMPGQNQGSVPIIRM
FGVTDNGNSVCCHVHGFAPYFYTPAPSGFSPAHLSDFQKELNAVVLKDMRSNKDSVSVTV
LAVDIKRKESMYGFHGNRSVDFLRITMAKPRLIAPAKRLLEQGFKFGSFPLQSYTSYEAN
IDFEIRFMVDSNMVGCSWIELPAGKYRVREEKGLADPELGHPTKVSLCQYEVDVAWTHLV
SHPAEGDWQRIAPLRVLSFDIECAGRKGIFPEPDTDPVIQIASMVQRHGEKEPFVRTVFT
LQSCAPIVGSQLLCFTQERQLLQSWAEFVRTVDPDIITGYNIQNFDLPYLLNRAAALKVD
LFAYLGRVRGIRCVIRDSSFQSKQVGRRENKTVNMEGRVQFDLLQVLLRDYKLRSYTLNA
VSFHFLHEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLQKLMCIINYMEMA
RVTGVPLTYLLSRGQQIKVVSQLLRQAMRQGLVMPVVKTEGGEDYTGATVIEPEKGYYSV
PIATLDFSSLYPSIMMAHNLCYTTLLQKGSMEKLGLSSEDFIKTPTGDLFVKSSVRKGLL
PEILENLLSARKRAKAELKKETDPFKKQVLDGRQLALKISANSVYGFTGAQVGKLPCLEI
SQSVTGFGRQMIEQTKQLVEARYTVANGYQANAKVIYGDTDSVMAKLGVATVKDAMDLGR
EAADWVSTHFTPPIKLEFEKVYYPYLLINKKRYAGLYFSSNSETHDKMDCKGIETVRRDN
CPLVANLINTCLQKILIDRDPQGAVEHAKEVISDLLCNRIDISQLVITKELTRSAQEYAG
KQAHVELAERMRKRDAGSAPNLGDRVPYVIVKAAKGTAAYMKSEDPIFVLENNIPIDTQY
YLEQQLSKPLLRIFEPILGESKAESVLLKGDHTRCKTVLTSKVGGLMAFAQKRSTCIGCR
AVLKTDAAVCDFCKKRQSELYQKEISHLSSLEERFSRLWTQCQRCQGSLHEDVLCTSRDC
PIFYMRKKVQKDLDDQEKLVARFGW
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggaggggaagcgcgtgaacggcagcccggtgacaggtggagcctctcaggccaagcgg
agcaaagtgagcggggactgggaagacggtccctctctctttgaggaggagctggccatg
ctggacgaagccgagatggaggcggagttgagggagggacaagccggccacgatgtcatt
cctgtcggtgacctgttctcggcagacctgaacccccgctggcgccgtccgcagcccccg
ctcctggactccacggccgacaagctggtcttccagcagatagagatcgactactatctg
ggctcccctgtggatggaatgccgggccagaaccagggcagcgttcccatcatccgcatg
tttggcgtgaccgacaacgggaactccgtgtgctgccacgtgcatggtttcgcgccatac
ttctacacacctgcgccgagcggcttctctccagcacacctcagtgacttccagaaggag
ctgaacgccgttgtactgaaggacatgcgctccaacaaggacagcgtgtccgtcactgtg
ctcgccgtcgacatcaagcgcaaagagagcatgtatggcttccatggcaaccggtccgtg
gacttccttcgcatcaccatggcaaaaccccgcctcattgcccctgccaagaggttgctg
gagcaaggcttcaagttcggctcctttccgctgcagagctacacttcgtacgaagccaac
attgactttgagatcagattcatggtggacagcaacatggtgggctgctcctggatagag
cttcctgccgggaagtatcgggtgagggaggagaagggcttggccgatcctgagctgggc
catcccaccaaggtgtcgctgtgtcaatacgaggtggacgtggcgtggacacacctggtg
agccacccggcagagggagactggcagcgtatcgcccctctgcgggtactcagctttgac
atcgaatgcgccgggaggaaaggcatcttcccggaacctgacacggaccccgtgatccag
attgcgtccatggtgcagcggcatggggaaaaggagccctttgtgcgcacagtgtttacg
ctgcaatcgtgcgcccccattgtgggctcccagctgctgtgcttcacgcaggagcggcag
ctgctgcagagctgggcggaatttgtgcgcacggtcgaccccgacatcatcacgggctac
aacatccagaacttcgacttgccctacctgctgaaccgtgccgcagctctgaaggtggac
ctgtttgcgtacctgggccgtgttcgaggaatcaggtgcgtcatccgagactcgagcttc
cagtccaagcaggtgggccgcagggagaacaagacggtgaacatggagggccgagtgcaa
tttgacctgctgcaggtgctgctcagagactacaagctgcgctcgtacacactcaatgct
gtcagcttccacttcctgcatgagcagaaggaggatgtgcagcactccatcatcacggac
ctgcagaacgggaacgagcagacgcgccgccgcctcgctgtctactgcctcaaggatgcc
tatctgccgctgcggctgctgcagaagctcatgtgcatcattaactacatggagatggca
cgggtgacgggcgtgccactcacctacctgctgtcacgtggccagcagatcaaggtggtc
tctcagctcctgcgccaggccatgcgtcagggcctcgtgatgccggtggtgaagacggag
ggaggcgaggactacaccggagccacagtcattgagccagagaaagggtactatagtgtt
cccatagcaacgctggacttctcttcactgtacccgtccatcatgatggcgcataatctg
tgctacacaacactgctgcagaagggctctatggagaaactggggctgtcctcggaggac
ttcatcaagacccccacgggggacctgtttgtgaaaagctcagtgagaaaggggctgctg
cccgagatcctggagaacctgctgtctgccaggaagagggcaaaggctgagctcaagaag
gagacggacccctttaagaagcaggtgttggacggccgccagctggccctcaagatcagc
gccaactccgtgtacggtttcacaggtgcccaggtgggcaagctcccctgcctggagatc
tctcagagcgtcacaggcttcggcagacagatgatcgaacaaaccaagcagctggtggag
gccaggtacacggttgccaacggttaccaggctaatgccaaggtgatctacggggacacc
gactctgtgatggccaagctgggcgttgccaccgtgaaggacgccatggacctggggcgt
gaggcggccgactgggtctcgacccacttcacccctcccatcaaactagagtttgagaag
gtgtactacccgtacctgctgatcaacaagaagcgctacgctggcctgtatttctcctcg
aactcagaaacgcatgacaaaatggactgtaaaggcatcgagacagtacgcagggacaac
tgccccctggtggccaaccttatcaacacctgcctgcagaaaattcttatcgacagggac
ccccaaggggctgtggagcatgccaaggaggtcatctcagacctgctgtgcaaccgcatc
gacatctcgcagctggtgatcacgaaggaactgacgaggagcgcccaggagtacgctggc
aagcaggcacacgtcgaactggctgagaggatgaggaaacgcgacgcaggaagcgccccg
aacctcggcgacagggtgccctacgttatcgtcaaggcagccaaaggcacagcggcgtac
atgaagtcagaggaccccatcttcgtgctggagaataacatccccatcgacacacagtac
tacttggagcagcagctctccaagcccctgctgcgcatcttcgaacccatcctgggggag
agcaaagccgagagcgtcttgctcaagggagaccacacccgttgcaagactgtgctcact
tctaaggtgggtggtctcatggcgtttgcccagaagaggagcacctgcatcggctgccga
gccgtgctgaagacggacgcggccgtgtgtgacttctgcaagaagcggcaatctgaactc
taccagaaggagatctcccacctgagctccttggaggagcgcttctcacgcctctggacg
cagtgccagcgctgccagggctcgctgcatgaggatgtgctgtgtactagccgcgactgt
cctatattctacatgaggaagaaggtgcagaaggatctggacgaccaggagaagctggtg
gcacggtttgggtggtga
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integrated database retrieval system
