Scleropages formosus (Asian bonytongue): 108941778
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Entry
108941778 CDS
T04919
Symbol
top3a
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03440
Homologous recombination
sfm03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108941778 (top3a)
03460 Fanconi anemia pathway
108941778 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfm03032
]
108941778 (top3a)
03400 DNA repair and recombination proteins [BR:
sfm03400
]
108941778 (top3a)
Enzymes [BR:
sfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
108941778 (top3a)
DNA replication proteins [BR:
sfm03032
]
Eukaryotic type
DNA Topoisomerases
108941778 (top3a)
DNA repair and recombination proteins [BR:
sfm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
108941778 (top3a)
FA (Fanconi anemia) pathway
108941778 (top3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Neprosin_AP
DUF555
Motif
Other DBs
NCBI-GeneID:
108941778
NCBI-ProteinID:
XP_018620132
UniProt:
A0A8C9WS68
LinkDB
All DBs
Position
8:complement(31709420..31716210)
Genome browser
AA seq
1000 aa
AA seq
DB search
MICHMKWLLPRFGIRLTAQSRFCGHGSSEMIRRTEIKRVLCVAEKNDAAKGIAEIMSNGR
ARKREGYSVYNKIYEYEYHLFGQNVTVSMTSVSGHLLGLEFKAPFQKWHSCNPVLLFDAE
VEKYCPENSVPIKRTLESEARQSQALIIWTDCDREGENIGFEVIDVCKAVKSNIQVFRAR
FSEITPNSVQRACETLGEPNIHISDAVDVRQELDLRIGAAFTRFQTLRLQKIFPSSLANQ
LISYGSCQFPTLGFVVERFKAIQAFIPETFFKIQVTHETEDEKVEFSWKRHRLFNHTACL
VLYQMCMEDPIATVVSVTSKPKSKWRPLPLDTVELEKLASRKLKINAKETMRIAEKLYTQ
GYISYPRTETNMFPQGLNLTSLVEQQTQDPEWGAFAQGILDRGGPTPRNGNKSDQAHPPI
HPTKYTNSLQGNERRLYEFVVRHFLACCSQDAQGQETTVDIEIVREKFCAHGLMIIARNY
LEVYPYEKWYGKVIPVYEQGSQFQPTSMMMVEGETSPPQLLTEADLIALMEKHGIGTDAT
HAEHIETIKTRLYVGLTPDQRFLPGELGMGLVEGYNSMGYEMSKPDLRAELEADLKLVCE
GRKNKAEALGHHVQKYKAVFTESVRKAKKLDEALSVYLGEAQEYTGPEHQDVEMALPVRK
CPQCGRDMVLKKKSDGTGKFLSCTGYPSCKTAVWFPDMVLEVSRDESICPTCQPHPVHML
KFKFKKGSLPPMMPLEFVGCIGGCDEMLREVLNLKYLRAGGGGGVSSVTQTNNHSVGALL
TSSGAHPASTPAPASRKPAATPTARWTLPPATTESSDVIVCNCGQEAVLLTVRKDGPNKG
RQFYKCSTGSCGFFLWVEQSNEQDGANLNFTPPRPSVGFGSAGSGQGATVCGCSEPAVER
TVAKEGSNKGRIFLTCRKPREKQCGFFQWLDSPQVSAPNSGRGGTAEAPRATGAGRGSRA
RRGREAGDETSSMPLVPKRPRACGVCRQPGHTRNNCPLNC
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgatctgtcacatgaagtggttgttaccacgatttggcataagactgacagctcagagc
aggttttgtggacacggttcaagtgaaatgatccgcaggaccgagattaaaagggtcctt
tgtgttgcggagaagaacgatgctgccaaaggtattgcagaaattatgtcaaatgggaga
gcaaggaagagagaagggtattcagtgtacaataagatatatgaatatgaatatcacctc
tttggacagaatgtcactgtttccatgacttccgtctctgggcatcttttggggctggaa
tttaaagcgcctttccagaagtggcacagctgtaatccagtgttgctgttcgatgcagag
gtggagaaatactgccctgagaactctgttccgatcaagaggactctggaaagcgaggcc
cgtcagtcccaggcgttgatcatctggaccgactgtgaccgggagggagagaacatcggc
tttgaggtcattgacgtgtgtaaagcagtcaagagcaacatccaggtgtttcgagcccga
ttctccgagatcaccccgaactctgtccagagggcttgtgaaaccctgggggagcccaat
atccacatcagcgacgccgtggatgtccggcaggagctggaccttcgcatcggagcggca
ttcacccggttccagactctgcgcctgcagaagatcttccccagctccctagccaatcag
ctcatcagttatggcagctgtcagtttcccacgctgggcttcgtggtggagcgcttcaaa
gcgatccaggccttcatccctgagaccttcttcaaaatacaagtgactcatgaaaccgag
gacgagaaggttgaatttagctggaagcggcacaggctcttcaaccacacggcgtgtctg
gtgctctatcagatgtgcatggaggatcccatagccacagttgtcagtgtcacaagtaaa
cccaaaagcaaatggcggcctttgcctctcgacactgtggaactggagaaactagcttcc
cgtaaactgaagattaacgccaaagagacgatgagaatagccgaaaaactgtacactcag
gggtacatcagctacccacgcaccgagaccaacatgttcccccagggcttgaaccttacc
tcgctggtggagcagcagacgcaggaccccgagtggggtgcctttgcccagggcatcctg
gaccgcggcggtcccactccgcgcaacggcaacaagtcggaccaggcgcaccccccgatc
caccccaccaaatacacaaacagtctgcagggtaatgagcggcggttgtacgagttcgtt
gtgcgccacttcctggcctgctgctctcaggatgcccagggccaggagaccaccgttgac
atagaaattgtgcgggagaagttctgcgctcatgggctgatgatcattgccaggaactac
ctggaggtgtatccctacgagaagtggtatggcaaggtcatccctgtgtacgagcagggc
tcccagtttcagcccacttccatgatgatggtggaaggagaaacgagtcctccacagctg
ctgacagaggccgatctcattgcgcttatggagaaacacggcatcggcactgatgcgacc
catgccgaacacattgagacaatcaagacccgcctgtatgtgggattgacgcctgaccaa
aggttcctcccgggagaactcggcatgggcctcgtggagggatacaactcgatgggttat
gagatgtccaaaccggacctgagggctgaactggaggccgacctcaagctcgtctgcgaa
ggcaggaagaacaaagccgaggctcttgggcatcacgtgcagaagtacaaggctgttttc
acagagtccgtgaggaaggccaagaagctggacgaggcactatccgtctacttgggggag
gcccaggaatacacgggacccgagcaccaagatgtggagatggccctccccgtacgcaag
tgcccccagtgcggccgcgacatggtgctcaagaagaagagcgacggtacagggaagttc
ctgagctgtacaggataccccagctgtaagacagccgtgtggttccctgatatggttctg
gaggtcagccgagacgaaagcatctgccctacctgccagccgcatccggttcacatgttg
aagttcaagttcaagaaaggcagcctgcctcccatgatgccgctggagtttgtgggttgc
attggtggctgtgacgagatgctcagggaggtgctgaacctgaagtacctcagagcaggt
ggcggtggtggtgtcagttcagtcacgcagactaacaaccactcggtgggcgctctgctg
acatcgtcgggagcacatccagcatccacgcccgctcctgcatcccggaaacctgcagcc
acacccacagccaggtggacattgcccccggcgacgacagagagcagcgatgtcattgtg
tgtaactgcgggcaggaggccgttctgctcacagtgcgcaaggacgggccgaacaagggc
cgccagttctataagtgcagcacagggagctgcgggttcttcctgtgggtggagcagtcg
aacgagcaggatggggctaacctgaacttcacaccgccaaggccatctgttggctttggc
tcggcagggagcggacagggagccaccgtgtgtggctgcagcgagccggcagtggaacgc
actgtggcgaaggaggggtccaacaaagggaggatattcctcacttgcaggaaaccgcgc
gagaagcagtgcggcttcttccagtggctcgatagtcctcaagtttcagcaccgaacagc
ggcagaggaggcactgcagaggcaccgcgggcaactggcgcagggcgaggcagcagagcg
cgacgtggcagggaagcaggcgatgagacctccagcatgcccctggtacccaagaggccg
cgcgcctgtggagtgtgtcggcagcctggccacacaaggaacaactgccccctaaactgc
tag
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integrated database retrieval system
