Scleropages formosus (Asian bonytongue): 108941845
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Entry
108941845 CDS
T04919
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03440
Homologous recombination
sfm03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108941845 (brca2)
03460 Fanconi anemia pathway
108941845 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfm04121
]
108941845 (brca2)
03036 Chromosome and associated proteins [BR:
sfm03036
]
108941845 (brca2)
03400 DNA repair and recombination proteins [BR:
sfm03400
]
108941845 (brca2)
Ubiquitin system [BR:
sfm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
108941845 (brca2)
Chromosome and associated proteins [BR:
sfm03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
108941845 (brca2)
DNA repair and recombination proteins [BR:
sfm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
108941845 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
108941845 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
BRCA2
Tower
BRCA2_TR2
DUF6782
Motif
Other DBs
NCBI-GeneID:
108941845
NCBI-ProteinID:
XP_018620247
LinkDB
All DBs
Position
10:4056142..4075584
Genome browser
AA seq
3020 aa
AA seq
DB search
MLDVLSPHLKEALGPLHTDWFELLTAKVSAGPSAEDHGSTSPSYVQEHCFKTPVGEVSME
SEIFSTPKIFRERGTESPIPITQDEELHHSDRGTGAPKILDHADSPFSFGSAKHSHAVRS
SGRNQLSGNCFGFLDTPRSSVSQSVKRISESLGAQIDPDESWTSSLNTPPVLSPTVILTK
TSDSSCLVSCSGDKQAIFVRKLFPSLSEASGINKLPSNKDKAVLHFEPLRQFEKAEFAST
ATPDVTPSVWKQKMPEAIRDREVRSTVAYVLGGAEDVLSVIFSNGNNNSLVQKTKASERC
RRNQPRSTCKDALNNPTEDTVASVTSTIVELCKDPVTIVADEVQLIGDCSDTSHFAESSL
TAASCEITQWTPLTLPDSEIIHTEKAHSLPSSEGNTAAPSNASVGKQLFANPPESFTLYA
KNEAMDRVVPTHRGHNSDMQDKNKSQYPDSYSTGGEEPKSGQLKSSPTDNLLLNVQAPEL
NHSCQPDGDTSPGKLSQCSSKIQKENRVFQSGGSELLQVSQEGFVAMSSIRKPPRKFFYT
CQNPGMSGQTSNSTTANNHSFSAPAATPFSGDSPRDMQSGRAVFFSEGKHKNITMDLLDC
QNMCEQYSGKVAENSNPMVSEKENGLCDTYAENPMEDKNSGRECSLKTNTFHNLQNGCTG
TLTSAMLQGMTFLAEASLNKVISNTEHEMTTYEQSALMKENSVVSMESTHPVNVSESNDC
LSDGVKMTSGNQKSESGYYTSWSNVIQFPGSSDGISRPRKGIQLECCFKTASEKIISLPW
EAIQRAKALLNETVEDNTRVGQSRNLIENSNNVTQSKDLGMEANVGIFQVVSKYDDNVSE
GNGHPCKSAMGNNSQSAPNSLSHFTGQSPSHSLIGCKAASNTVLQVYSKKLARARQLFEV
DEKQLKKNPDINVVTGSGKVEKEAHLHGTSEAAPVFHVSSSHHGHLDDYCSLTASQRADV
AELCSILEEAYTQFEFTQFQQEKKASNRRDELCLQHPCDTEIDPDLLKGIDFDDSLCEKQ
VDRQESEEIEASEELLPNIKQSMHDSSFKTETVTISSCDLADKPMEKSLCASQKDGNNFL
VHNNTSNLETFYSARSVKMTVPEDYVKKASGVGLDLCCVLSSVSENSHSVKDKCDELQHD
ILKFQRQDLSKVTTCYSTEQGNLNTKEFSAKELHITSVFDKGKQSLENVKWKNFKSHKSG
SSNLAHCVDFKTPTGSAVSISERSLSRVTAMFADLEEDYRSGNEQRNNSHMNLKRHNAEM
KNEYSQAKYDHSKAEDTLNCNSAIEYSNNLIRESLSKRLCFEVNSTAKEFDTSALQTKEM
SKRDFVKNACNLPSGSGYLSVEDKESEENLQQIKSQLKKPVENSSECEHSIGDKFHLSLR
LQCEKDAGFKTASGKCVFISEKALEQAKTIFRDCDETASCEITRVENTSGNEITPASSSA
FTFASGKGVSISAQALQQAKAVFRNRDKTTIYEMTACVDRKTTDGKNSGEGVSISVEEID
KTNCFLKDCDNILTSGTEMKKPVGKDDSGTSGSSHFGFSNTCEEEMCVSEMLPLKPKAPV
IEYDKPTDHTVFGLTHEISSGFSTASGKGVSISTKAMQKAKALFAAMEDTSFCDSGTQDM
NRDGRSNFTDSLCAETRNWGFSTAGGKKVTVSEMALRKARGLLDQSDNIEKAKPEKYFGT
LKCTKDNARPLECQNSKDSNKGLSTSLKEAGEAQLKFYDCLESEMHGKFENHVKMECGSG
LCDSKTVSCSFRTAGGKGVVITGKALKEAKALFEDCDNLENVTCPKINRPARKSRSFYSA
HQNSGDGPFSDRETEIISENSCQKEALLSCDRNEQANGLQKVSNTKLIAEQAGAQKKLVE
SLPSLEVPQQNSSLLNLGFSGCTMTQQKYLEQEAMACTKALLEDEEFTRKISQQHLEDSP
CEPHTASQHLDQSNSTEQRIKSLKRFRPVDFHWKDQPPLKRQLLTEFERTSNGGKHSYLT
PLKSSPNGTLNDRRTFKYSMPLQPVVTRPSFNKSSEELKLQKKSEMPHKNSKHMKPTCNA
FLPPFQKQLGAKIVCDTGSQRPSRPTGTFVPPFRSIHFKMNSDLKDNPAEVPKGKQSTCK
SQASAAPNVFVPPTKKKPASVSELGATCDAGEKGLNCGAPNPAPALPTEEKANCSETQLM
PLENLQNARDLQEMRIMKKKRQTIRPQPGSLLLAKTSGGPRVSLKNAFGGRTPTRYTEEE
LYIHGVHRFVSQINSSNAESLHFHCSDFFRQEVLTEGCGVQLGDGGWLIPTNDGTVGKEE
FYRTLCDTPGVDPKLISESWVYNHYRWVVWKQASMEKSFPEQLGSRCLTPEQVLLQLKYR
YDVEVDQSRRSALRKIMERDDTPAKTLVLCVCGIASNDSTLNLPAQSENKTIKDVDTKNY
LPTGVIWVTDGWYAIRALLDAPLTTMVRKGRLAAGVKIVTHGAELVGSQDACTPLEAPST
LMLKVMANSTRPARWDAKLGFHCDPRPFRLPLSSLYSNGGLVGCVDIVVLRSYPVQWMEK
LPNGAFVFRNGRAEDREARRHSDTKQKHMEALFNKVQAQFEKDQEVKSKPRGRRQIFTRQ
EIEALQEGVELHEAVDSDPTCLEVLLSEKQLETLRNYRRSLEEEKQARLQEQFRQALEEA
QKAKVSCSDREVTPVWKLCISDCQEQADGRGYFLNIWRPSADLQTLLKEGSCYRVYNLAT
SEAKKRTSNVSIQLSATKKTQFRHIQTSSEALSELFQPRVCVSFPTLLNPGFHPLCKEVD
VVGFVISITDKQCSFPVVYLANECLDLVAVRCSCSLAQLAVEEVVRPQALLAFSNLQLCC
DTSAPMPVLYASDLALFSANPQEPHLQEACLRMKKAVQGHEHFFGTAEEKLFNIILSDRC
SLPSPKVEAFTPKTPCWSTRQPDKNIDTTPTPPKPVGCTTLVNQKPPTLTSNSEEQDPKR
LKRKRGLDYLSRIPSPPPLQPLGTTASLPVSRNFLPPRQSETPGSVDKQQRPVSRCPPTV
EDDWVNDEELAMINTQGLMD
NT seq
9063 nt
NT seq
+upstream
nt +downstream
nt
atgttagatgtgctgagtcctcatctcaaagaagctttgggaccgcttcacacagattgg
tttgagctgctgactgcaaaagtctcagctggaccttctgctgaagaccatggcagcacc
agtccttcctatgtgcaagaacactgtttcaaaacacccgttggggaagtttctatggaa
agtgagattttttccacgcccaagatcttcagggagagaggaacagagtcgcccatcccc
ataactcaggatgaggagctccaccactctgacagaggtacaggagcaccaaaaatattg
gaccatgctgacagtcctttttcatttggatctgcaaaacacagccatgcagtcaggagc
agtggaagaaatcagctctcaggaaattgttttggatttctggatacaccaagaagctct
gtatctcaatcggtcaaacgtatctctgaaagcctgggtgcgcagatagatcctgatgag
tcctggaccagttctctcaacacaccaccagttttgtctcctactgtaattctgactaag
accagtgacagttcttgtttggtaagctgctctggagataaacaagccatttttgtgcgg
aagctcttcccttccctctctgaggcctctggaatcaacaagttgccatcaaataaggac
aaagccgtactacattttgaacctctcaggcagtttgaaaaggctgaatttgccagcact
gccacaccagatgtgacccccagtgtgtggaagcagaagatgccagaagccattcgagac
agagaagttcgcagcacagtggcatatgtgctgggcggagctgaggatgtcctttctgtc
atcttcagtaatggaaataacaacagtttggtgcagaaaacaaaagccagtgagagatgc
aggaggaatcaacctaggtcaacatgcaaggatgcgttaaataaccctacagaagatact
gtggcctctgtaacaagcaccatagtggaactttgcaaagatccagtgacaatagtggca
gatgaagtccaactcattggtgattgctctgacaccagtcattttgcagaaagctccctt
acagctgcaagctgtgagataactcagtggactccactaactttgcctgattctgaaata
attcacactgagaaagctcattcactgccttcatcagaagggaacactgctgctccctca
aatgcatcagtaggaaagcagctgtttgccaatccaccagaaagctttactttgtatgca
aagaacgaggcaatggacagagttgtgccgacccatcgtggccataattcagatatgcaa
gataaaaacaagtcccagtatcctgattcttatagcacagggggtgaggaaccaaaaagt
gggcagctgaagagttcacccacagataacctgttactgaatgtccaggctccagagctg
aatcatagctgtcagcctgatggagatactagcccagggaagttatctcagtgcagtagt
aaaatccagaaagaaaatagggttttccagtcaggtggctctgaattgcttcaagtttca
caggaaggctttgttgctatgtcatccattaggaaacctcccaggaagtttttttacact
tgccagaacccaggtatgtctggccaaacaagcaatagcacaacagcaaacaaccattct
ttttctgcacctgctgcgactcccttttcaggagattctccaagggatatgcaatctgga
agagctgtatttttcagtgaaggcaaacacaaaaacataaccatggatctgttggattgt
caaaatatgtgtgaacaatatagtggcaaagtagcagagaacagtaatcccatggtttca
gaaaaggagaatggtctttgtgatacatatgctgagaatcccatggaggataaaaattct
ggtagagaatgcagcttaaagacaaacacttttcacaatctccagaatggctgtacaggc
actttgacctctgccatgctacaaggcatgacctttttagcagaagcatctttaaacaaa
gtcatatcaaatactgaacatgagatgactacttacgaacagagtgctttaatgaaggaa
aattctgtagtttccatggaatcaacacatcctgttaatgtcagtgaaagtaatgattgt
ttatcagatggagtgaagatgacatctggaaatcaaaagtctgaaagtggatattataca
tcctggtccaatgtcatacagtttcctggatcatcagatggcatctccagacctagaaag
ggaattcagctggagtgttgttttaaaacggcaagtgagaaaataatttctctcccctgg
gaagcaatacagagagcaaaagctttactcaacgagacagtggaggacaacacaagagtt
ggacagtcaaggaacttgattgagaattctaacaatgtaacccaaagcaaagatttgggt
atggaagcaaacgttggtatttttcaggttgtcagtaagtatgatgataatgtgagtgaa
ggaaatggtcacccctgtaagtcagctatgggaaacaactctcagagtgcccccaactct
ctttctcatttcacagggcagtctccatcacacagtcttattggctgtaaagctgcctcc
aacacagtactacaggtgtactccaaaaagctggccagggccaggcagctgtttgaagta
gatgaaaagcagcttaagaaaaatccagacatcaatgtggtcacaggtagtggcaaagta
gaaaaggaggcccacctgcatggaacatcagaggcggcacctgtatttcatgtttcatcc
tctcatcatggtcatttagatgattactgttctctgacagcatcccagagagctgatgtt
gcagagctctgtagcattttggaagaggcatacacccagtttgagtttacacagtttcaa
caggaaaaaaaggcctctaacagaagggatgaactttgtctacaacatccttgtgataca
gaaatagatcctgatttgctgaagggaatagattttgatgatagtttatgtgagaaacag
gtggacagacaggaaagtgaagaaattgaagcatcagaagaactcttgccaaacatcaag
caaagtatgcacgattccagtttcaaaactgaaactgtgacgatatcatcctgtgatttg
gctgacaaacccatggaaaaatctttgtgtgcaagtcagaaggatggcaataatttctta
gtccataacaacacatccaatcttgaaaccttttattctgcccggagtgttaaaatgact
gtgccagaagattatgtcaagaaagcttcaggtgttggtttagatctttgctgtgtttta
agttctgtgtctgaaaattcccattctgtaaaagataagtgtgatgagttgcaacatgac
attttgaaatttcaaaggcaggatttaagtaaggtaacaacatgttactccactgaacaa
ggcaaccttaataccaaagaattctcagcaaaagaattacacatcacctctgtgtttgat
aagggaaagcagagtcttgagaatgtcaaatggaaaaatttcaaaagtcacaaatcaggc
agctctaaccttgctcattgtgtcgattttaaaactcccacgggaagtgctgtgagcatc
tctgagagatctctgagcagagtgacagcaatgtttgcagatttagaggaggactacaga
agtggaaatgaacaaaggaacaactctcacatgaacttgaagaggcacaatgctgagatg
aaaaatgagtattcacaggcaaagtatgatcattcaaaagcagaagacactctgaattgc
aattctgctatagagtatagtaataacctgattagagagagtctttctaaaaggctatgc
tttgaagtaaacagcactgcgaaggaatttgatacaagtgctttacaaactaaagaaatg
tcaaaaagagattttgtaaaaaatgcctgtaatcttccaagtggttctgggtatttatct
gttgaggacaaggagtcagaagaaaaccttcagcagattaaatcgcaactaaaaaagcct
gttgaaaattcctcagaatgtgagcattccataggtgacaaatttcacttgtcccttagg
cttcaatgtgaaaaagatgcaggtttcaaaacggctagtggtaaatgtgtgttcatttca
gagaaggcacttgagcaggcaaaaactatattcagagattgtgatgaaactgcaagttgt
gaaattacacgtgtggaaaataccagtggcaatgaaattactccagcaagcagttctgcg
ttcacctttgccagtggtaaaggggtgtccatttcagcacaggcacttcagcaagcaaaa
gctgtattcagaaatcgtgacaaaaccacaatttatgaaatgactgcctgtgttgacagg
aagaccactgatggcaaaaatagtggtgaaggggtgtccatttcagtagaagaaattgat
aaaacaaattgtttcttgaaggactgcgataatatattaacgagtggaactgaaatgaag
aaacctgttggaaaggatgattctggcacttcaggatcaagccattttggatttagtaac
acttgtgaagaagagatgtgtgtctctgaaatgctgcctttaaaaccaaaggcacctgta
atagaatatgataaacctacagatcatacagtttttggcttgacacatgaaataagcagt
ggttttagcacagccagtggtaaaggggtatctatttcaaccaaggccatgcaaaaagca
aaagcgctctttgcagcaatggaggatacttccttttgtgattctggcacacaagacatg
aacagagatggaagatcaaatttcactgattcactttgtgcagagacaagaaactggggt
ttcagcacggctggtggaaagaaggtgactgtatctgagatggccttaaggaaagccaga
ggtcttctggaccagtcagacaacattgaaaaagccaagcctgaaaaatattttggaaca
ctgaaatgtacaaaggataatgccagaccgttggagtgtcagaatagcaaagacagcaat
aaaggtttgtccacctcactaaaagaggcgggtgaggcacagttgaagttttatgactgt
ctggagagtgaaatgcatggtaaatttgaaaaccatgtaaaaatggagtgtggctctgga
ctttgtgattcaaaaacagtatcgtgtagtttcagaacagctggtggcaaaggtgttgtt
attacaggaaaagcacttaaggaggcaaaggccctgtttgaggactgtgataatttagaa
aatgtaacctgtccgaaaattaacagaccagctagaaagagtagaagcttctattctgct
catcagaattcaggtgatggtccttttagtgacagagagactgaaataatctctgaaaat
tcttgccaaaaagaagctttgctgagctgtgacagaaatgaacaagccaatggtctacag
aaagtttctaataccaaactcattgcagagcaagcaggagctcaaaagaagcttgtggag
tctttgccatcattagaggtgcctcaacaaaattcttccttattgaacctggggtttagt
ggttgcaccatgacccaacaaaagtaccttgaacaggaggctatggcatgtacgaaggca
ttgctagaggatgaagagttcaccaggaagatttcccagcagcacttggaagattcacct
tgtgaaccacatactgcatcacaacatctggatcagtcaaactctacagagcaaagaatt
aaaagtctaaaaaggtttaggccagtggactttcattggaaagatcaaccccctctgaaa
cgacagcttctgacagaatttgaaagaacttcaaatggtggaaagcactcttacctgacc
cctttaaaaagcagtccaaatggtacactgaatgacaggagaaccttcaagtacagtatg
cccctacaacctgtcgtgactcggccttctttcaataagtcatctgaagagctaaagctc
caaaagaaatcggagatgccccacaagaatagcaagcatatgaagcctacctgcaatgca
tttctgcccccatttcagaagcaacttggagcaaaaatagtgtgtgacactggatctcaa
aggccaagcagacccacaggtacctttgtgccccctttcagaagtatccacttcaagatg
aacagtgatcttaaagacaacccagctgaagtcccaaaaggaaagcaatctacttgtaag
tcacaagcttcagcagcacccaatgtgtttgtccctcctactaaaaagaagccagcaagt
gtttctgagttaggtgccacctgtgatgcaggagagaagggattaaactgtggggcacca
aacccagcacctgccttaccaactgaggagaaggccaattgctcagaaacccagcttatg
ccccttgagaacttgcagaatgctcgagacctgcaggaaatgcgaataatgaagaagaaa
cgacagaccattcgaccccagccagggagcctcctgcttgccaaaacatctgggggtcct
agggtatccctaaaaaatgcttttggagggagaactcccacgcgatacacggaagaggag
ttatatatacatggtgtccaccggttcgtctcacagataaacagcagcaatgcagagtct
ttgcacttccactgcagtgacttttttagacaggaggtgttgacagaagggtgtggagtt
cagctgggtgatggtggttggttgatccctacgaatgatggaacagtgggaaaggaggag
ttctacaggaccttgtgtgacactcctggagtggatcccaagctaatcagtgagagctgg
gtgtacaatcactatcgttgggtggtttggaaacaggcctccatggagaaatcatttcct
gagcagctgggaagccggtgcttgactccagagcaggttctgcttcagctgaaatacagg
tatgatgtggaggtagatcagagtcgaaggtctgcgctgaggaagatcatggaaagggat
gatactccagctaagacccttgtgctctgtgtctgtggcattgcctctaatgactccacc
ttaaacctacctgctcaatctgaaaacaagaccattaaggatgtagataccaagaattat
ttgcccacaggggttatttgggtaacagatggctggtatgccatcagggcactgctagat
gccccactaacaacaatggtacggaaaggccgcctggcagcgggtgtgaagattgtgacc
catggggcggaacttgtgggctctcaggatgcatgtacccctctagaggcaccctcaact
ctcatgctcaaggtcatggccaacagcaccagaccagctcgatgggatgccaagttgggt
ttccactgtgaccctcgaccttttcgtctacccctctcatctctgtacagtaatggaggc
ctggtgggctgtgttgatattgttgtgctcagaagttatccagtccagtggatggaaaaa
ttgccaaatggtgcttttgtgtttcgcaatggccgcgcggaggacagagaagctcgtaga
cacagtgacacgaagcagaaacacatggaggccctctttaataaggttcaagcccagttt
gagaaggaccaggaggtgaagagcaaacctaggggccgaaggcagatattcacacgccag
gagatcgaagctttgcaggagggggtggagctgcatgaagctgtggatagtgacccaact
tgcctcgaggttctccttagtgagaagcagctggagacactgaggaactacaggcggtcc
ttggaggaggagaaacaggcccgtctgcaggaacagttccgccaggccctggaagaggct
cagaaggctaaagtgagctgtagtgacagagaggtgacgcctgtgtggaaactctgtatc
tctgattgccaggaacaagcagatggcagaggatactttttaaacatctggcgaccctca
gcagatttgcaaaccttgctgaaggaaggcagctgttacagggtctataatcttgccaca
tcagaggccaagaaacgaaccagcaatgtatcgatccaacttagtgccaccaagaaaaca
caattccggcacattcagacatcctcagaagccttgagtgaattgttccagcccagagtg
tgtgtcagcttcccgactttgttgaacccagggttccaccctttgtgtaaggaggttgat
gttgtggggtttgtcatctccatcactgataaacaatgcagctttccggtggtttatcta
gcaaatgagtgcctggacctggtggctgtgcggtgctcctgcagtctggcccaactggct
gtagaagaggtggtgagaccacaggccctgcttgctttcagcaacctgcagctgtgctgc
gacacatctgctcccatgcctgtcctgtatgcaagtgacctagcactgttttcagccaat
ccccaggagccacacctacaagaggcttgtttacgaatgaagaaagctgtccagggacac
gagcacttctttgggacagcagaagagaagcttttcaacattatcctgtcggatcggtgc
tctttaccttctcctaaagtagaggctttcactccaaaaacaccatgctggagcacgcga
cagccagacaaaaatattgacactacaccgacccctccaaaacctgttgggtgcaccaca
cttgtaaatcagaagccccctacacttaccagcaattcagaggaacaggatcccaaaagg
ctaaaaaggaagcggggcctggactacctatcccgcatcccctctcctcctcctctccag
ccacttggaacaactgcgtcactgcctgtgagcagaaattttctacccccaaggcaatct
gagacacctggttctgtggacaaacagcaaaggcctgtatctcgctgtcctcctacggtg
gaggatgactgggtgaatgatgaagaactggctatgatcaatacccaaggattgatggat
tag
DBGET
integrated database retrieval system
