Scleropages formosus (Asian bonytongue): 108942108
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Entry
108942108 CDS
T04919
Name
(RefSeq) interferon regulatory factor 3 isoform X1
KO
K09447
interferon regulatory factor 7
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04620
Toll-like receptor signaling pathway
sfm04621
NOD-like receptor signaling pathway
sfm04622
RIG-I-like receptor signaling pathway
sfm04623
Cytosolic DNA-sensing pathway
sfm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
108942108
04621 NOD-like receptor signaling pathway
108942108
04622 RIG-I-like receptor signaling pathway
108942108
04623 Cytosolic DNA-sensing pathway
108942108
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108942108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfm03000
]
108942108
Transcription factors [BR:
sfm03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
108942108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
MH2
Motif
Other DBs
NCBI-GeneID:
108942108
NCBI-ProteinID:
XP_018620726
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All DBs
Position
5:25590154..25595119
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AA seq
467 aa
AA seq
DB search
MQLKSPAVCLKGKVAALNKACLSHPECVSSSCKPQFAQWLVEQVDSGSYEGLRWVAKDRF
RIPWKHNSRKDCSDEDCRIFKEWAVVSGKYFENVSDKAKWKTNFRCALNSLKQFEMVEDR
SKESSDPHKVYQIVHSEYKDQNNRDITTNYEHPVIQKIFTDTPVIPLEQGLLSEMDSLNL
STQPTVYLNDTCANTCSPAEQLLWEVSCPMNVHPTEMAYSHQPMHVEPFHPNDVAESVCC
PVGQVPVYGAPALPGIQELEISVHYRRKEVLKERVMSHQVQLHYRSEDQAFGAQSICLPG
TENIPDRKQAHFTQQILNNLQQGLLLEVRQTGIYGLRQDRCHMYYCSTNPAEIKNPEPNE
LHRNRAVELLSFDKFIQDLNEFKENRRGSPDYTVYLCFGEKFPDGKLMDKKLVTVKVVPL
ICRYFHEMAQMDGASSLENGTVSLQFSNSLFDLINSTFGLPSSSSSP
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgcaattaaaaagccctgctgtctgcctgaaagggaaagtcgcagctctaaacaaagcc
tgtctgtctcaccctgagtgtgtgtcaagcagctgcaagccacagtttgcacagtggctc
gttgagcaggtggatagcggatcgtatgaggggctgcgctgggtggccaaggacaggttc
aggataccctggaagcacaactctaggaaggactgcagcgatgaagactgcaggatattc
aaggagtgggcagtggtcagtgggaaatattttgaaaatgtgagcgataaagcaaagtgg
aagaccaacttccgctgcgccctcaacagcctcaagcagtttgagatggtcgaggaccgc
tccaaggagtcgtcggatccgcacaaggtgtaccagatcgtccacagcgaatataaagat
cagaacaaccgggacatcacaacaaattatgaacatcctgttatacagaaaatcttcact
gacacccccgttatccctctggagcagggactgttatctgaaatggactccctgaacttg
agcacccagccgacagtttacctgaatgacacctgtgcaaacacttgctcaccagcagag
cagctgctgtgggaggtgtcctgtcccatgaacgttcatccaacggagatggcctattcc
caccagccaatgcacgtggagccttttcatccaaatgatgtggcggagtcagtctgctgc
ccagtaggccaggttccggtgtacggggcaccagccctgcctggcatccaggagctggag
atcagcgtgcactacaggagaaaggaggtgctgaaggagcgggtcatgagccaccaagtg
cagctacattaccgctcggaggaccaggcctttggggctcaatccatctgcctccctggt
acagagaacattccggaccgaaagcaagctcacttcacccagcagatcctcaacaacctc
cagcaaggcctgctgctcgaggtgaggcagacgggcatctacgggctgcgccaggacagg
tgtcacatgtactactgctccacaaaccccgcagagataaagaaccccgaacccaacgag
ctgcacaggaaccgagcggtggaactgctcagcttcgacaagttcatccaggacctgaac
gagttcaaagaaaacagacgggggtctccggattatactgtctacctgtgcttcggagag
aagttccccgatggaaagctcatggataagaagttagttactgttaaggtggtgcccctg
atttgccgctacttccacgagatggcacagatggacggcgcctcctccctggagaatggc
accgttagcctgcagttctccaacagcctctttgacctcatcaattctacctttggcctc
ccgtcgtcaagctcctccccatga
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