Scleropages formosus (Asian bonytongue): 108942243
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Entry
108942243 CDS
T04919
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfm04121
]
108942243
Enzymes [BR:
sfm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108942243
Ubiquitin system [BR:
sfm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
108942243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Ig_CycH
Motif
Other DBs
NCBI-GeneID:
108942243
NCBI-ProteinID:
XP_018620932
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All DBs
Position
5:complement(23773959..23815380)
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AA seq
754 aa
AA seq
DB search
MGCNLCTLQKREEHYKLLYEIAQVNGKDLSKGSHEEALEAFRSTKDPIVVQVLRRSPVSR
GNGHHHDVYLVDVCTQTDITFEHIMALSKLRPATPPVPDTCPFHLSDSCHSLHTMEHEYY
EGSEFLPSLPADSEKADTFEYEEVELYRQSSQEKLGLTLCYRTDDEEDVALYVSEVGPNS
IAARDGRIREGDRIIQINGQDVQDREEAVALLANEDSRSILLLVARPEMQLEEGWLDEEH
GDFLEELKMEVLEGARCTAVPQKQLTLPEDNNVTTDMDTFSKGNQNKDGGVSQKDSSMRH
EVHSDNEPQNLVQNRLSRFLRGPSVGSLVQETSVDSNTQSNESLGSEEHLGLPTPQKEEE
EEEEDEECDHFQQLLELKCQIRNSSEYGLYYSRRSTIGCSLTEQTGVEHELRLLNEELKS
IELECQNIMQAHQLRKARDQNGPPGTPRSKLADISEHPEKSDKDSSSAYNTAESSRSTPL
AMDRSPEHSLQRTVSLTNQKNLRSTLATSQGLQATILAKASCLKQGKPPRTEGVLSTGGK
HCGHEKPQIPQAPYLSSDHNSQYGHTNAPAHARHYQSYMHLVQQQSAMEFSQCQLSLLGV
DPKMEWKVKVRADGTRYITKRPARDKILRERALKIREERAGMTTDDDAVSELKMGRYWSK
EERKQQLARAREQRRRREFMQRCRLEGPRETSQSAGEGRKEVSIIELSNKKMMKKRNKKI
LDNWMTIQELMTHGAKATEVSGRVHNAFLSVTTV
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgggctgtaacctgtgcaccttacagaagagggaggagcactacaagctgctgtacgag
atcgcgcaggtgaatggcaaggacctctcgaaaggcagccatgaggaggctctcgaggcc
tttcgcagtaccaaggaccccattgtggtgcaggtgctgcggcggagccctgtttctagg
ggcaacggtcaccatcatgatgtctatctagtagatgtgtgcacacagactgacatcaca
tttgagcacatcatggccctctccaagcttcgccctgccacgcctccagtgcccgacacc
tgtccctttcatctttctgatagctgccactcactgcatactatggagcacgagtactac
gagggctccgagttcctccccagcctgccagcggacagcgagaaagcagacaccttcgag
tatgaggaggtggagctgtatcggcagagcagccaggagaaactgggcctcacactgtgc
tatcgaacagacgatgaggaggacgttgccctctatgtcagtgaggtagggcccaacagc
attgcagccagagatggtcgcataagggaaggggatcgcattatacagattaatgggcag
gatgtacaggaccgggaagaggcggtggcactgcttgccaacgaggacagcaggagcatc
ctgctgctggtggcgcggcctgagatgcagctagaagagggctggctagatgaggaacac
ggagacttcctggaggagctcaagatggaggttctggagggggctcggtgcacagctgtc
ccccaaaagcagctcacattacctgaggacaacaacgttacaacagacatggacaccttt
tccaagggaaaccaaaacaaggatggtggagtgagccagaaggacagcagtatgcgacat
gaggtgcactctgacaatgagccccaaaaccttgtacaaaacagactgtctcgattttta
agaggcccaagcgtggggagtctggtccaggagacatccgttgactccaacacacagagc
aatgaaagcctgggctcagaggagcacctgggactccccacaccacagaaagaggaggag
gaggaggaagaggatgaggagtgtgaccacttccaacagctcctggagctcaagtgccag
attcgcaacagtagcgagtatggcctatattacagccgccgcagcaccatagggtgcagc
ctgacagagcagaccggggtggagcatgaactgcgcctcctcaatgaagagctgaagagc
attgagctggaatgccagaatatcatgcaggcccaccagctccgcaaagctcgtgaccag
aatggacctccaggcacccccaggagcaagctggctgacatcagcgagcacccagagaag
tcagataaggacagctcgagtgcctacaacacagcggagagcagccgcagtacaccattg
gccatggaccgttctcctgaacactccctgcagaggacggtcagcctcaccaaccagaaa
aacctgcggagcacgttggccacaagccagggactgcaggccaccatcctggccaaggcc
agctgcctgaagcagggaaaacctcctaggacagagggggtcctgtccaccggtggaaaa
cactgtggacatgagaagccccagatcccccaagcgccctacttgtcttcagaccacaac
tcccagtatgggcacaccaatgccccagcccatgcgaggcactaccagagctacatgcac
ttggtgcagcagcagtcagctatggagttttcccagtgccagctgagcctgttgggtgtt
gaccctaaaatggaatggaaggtgaaggtccgtgctgacggcacacgctacatcaccaag
cggcctgcacgtgacaaaatccttcgcgagagagcgctgaagattcgcgaggagcgtgct
ggcatgaccacagacgatgatgctgtcagcgagctcaagatgggccgctactggagcaag
gaggagcgcaagcagcagctggcccgtgcacgggagcaacggcgccgtcgcgaattcatg
cagcgctgccggctggagggcccacgcgaaacttcccagagtgctggcgagggccgtaag
gaggtcagcatcattgaactgagtaacaaaaaaatgatgaagaagcgcaacaaaaagatc
ctggacaactggatgactatccaggagctgatgacacatggggccaaggcaacggaagtc
tccggaagggtccacaatgccttcctgtccgtcacgactgtgtga
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