Scleropages formosus (Asian bonytongue): 108942271
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Entry
108942271 CDS
T04919
Name
(RefSeq) contactin-1a-like
KO
K06759
contactin 1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108942271
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfm04515
]
108942271
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sfm00537
]
108942271
Cell adhesion molecules [BR:
sfm04515
]
Immunoglobulin superfamily
Contactins
108942271
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sfm00537
]
Others
108942271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Pur_ac_phosph_N
C2-set_2
DUF2808
Motif
Other DBs
NCBI-GeneID:
108942271
NCBI-ProteinID:
XP_029107956
LinkDB
All DBs
Position
5:24013224..24043956
Genome browser
AA seq
1049 aa
AA seq
DB search
MALNKENSLPQLMSRHKFNAAPGTPTKRTMWSLAPLLLALGLALTSLEALHSSEVASICT
DESGFGPVFEEQPMDTIYPEESPEEKITMSCRARANPPATYRWRLNGWDIKLLEQEDEHY
SLEDGNLVITNPDRNNHVGKYECVAQNMYGTIVSREAIVRFGYLDPFSTEERDAVYVKEG
QGAVLLCAPPPHYPDELLFRWMLNEFPVFIPLDKRRFVSQTTGNLYISRVDSSDLGNYSC
FVSSPSIAKSVFSKFISLVPIPERPTRKYPADIKVKFPDSYALVGQNITLECFALGNPIP
EIRWRKVDAELPANHEVSMEKALLHLINVQQEDEGTYECEAINSKGKDRHRARLYVDAYP
EWVEHFSSREADIGSNLTMSCLASGKPKPHVRWLKNGVLHVKGELKFTGLTFEHSGMYQC
IAENKHGVIYASGELRVIACAPTFEHNPVKERVLGAKNGRVLMECRPKAAPRARLSWSKG
TELLSNSSRIHIWDDGTLEILNVTQMDEGKYTCFAENDRGKANSTGTLFVTEATKITLAP
SNADVQVGESARMQCAASHDPNLDITFIWALGSHVIDFDKESDHYELTNRESSGELLIRN
TLLRHAGRYTCTAQTIVDNVSASAELVVRGPPGPPGGVRVDEITDKSVRLLWSRGTDNHS
PISKYTIQARDSFSVDPEEWKNANTLPANVEGNAETVTVVDLTPWMEYEFRVIATNTLGT
GEPSSPSPKIRMLEAVPVVAPSDIGGGGESSRELTITWTPVKPQYYYGKNFGYIVAFKAH
DDYQWRKVTVADPEAQRYVHKDPSIPPNTEFHVKVKAFNNKGEGPYSLTASLFSAQDAPS
EAPSDVSGRALSATEAIVFWRPTLEQSIDGYQVRYWRKHEESQAGTKVVENQGENQTRLE
NMLPDSRYFIEVRAFNKAGMGPPSVQYEIHTKKAPPSRPPRIIKKTLSGSSVKIAWEQVE
PLANESRIEGYKILYRQEGLSNGTLYTTGNRYIDLPVLSDRDYVVEVRAHSEGGDGAVAQ
VRISGGAEVVVRPLSLATLLLIALCCLGN
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggcgctaaacaaggagaacagccttcctcaactgatgtctcggcacaaattcaacgct
gctccaggtacccctacgaagaggaccatgtggtcgctggcacccctcctgctcgcactc
ggcctggccctcacctccttggaagcactgcactctagtgaagtagccagcatctgtaca
gatgaatccggatttggcccggtgtttgaggaacagcccatggacaccatctacccagag
gaatcgcccgaggagaagatcaccatgagctgccgggcgcgtgccaatccacctgccacg
tacaggtggcggctgaacggctgggatatcaagctgttggagcaggaggatgagcactac
agcctggaggacgggaacctggtgatcactaatccagaccggaacaatcacgtggggaag
tatgagtgcgtggcccagaacatgtatggcaccattgtcagcagggaggccatcgtcaga
ttcggatatctagatcctttctccacagaggagcgggatgcagtgtatgtaaaagagggt
caaggggccgtccttctctgtgccccacctccacattacccagatgagctgctgttccgc
tggatgctcaacgagttcccggttttcatcccgctggataagcggcgcttcgtttcgcag
accacgggaaacctctacatctccagggtggattccagcgatttggggaactactcctgc
tttgtatccagcccttccattgccaaaagcgtcttcagcaaattcatctcgcttgttccc
attcctgaacgccccacaaggaagtatcccgctgatattaaagtgaaattcccagactcc
tatgccttagtgggacagaacataacactggagtgcttcgctctgggcaaccccatccca
gagatccgctggaggaaggtggatgccgagctgcccgccaaccatgaggtcagcatggag
aaggcgctattgcacctcatcaatgtacagcaggaggatgaaggcacctacgagtgtgaa
gccatcaactccaaaggcaaggaccgccaccgagctcgtctctacgtcgatgcgtatcca
gagtgggtggagcacttcagcagcagagaggcagacatcggcagtaacctgaccatgtcc
tgtttggccagtggaaagcccaagcctcacgtgcgctggctgaagaatggggtcttgcat
gtaaagggggagctcaaatttactgggctgactttcgaacattccggaatgtatcagtgc
atcgctgaaaacaagcacggcgtcatctatgccagcggcgagctgcgagtcatcgcctgc
gcccccacattcgagcacaaccctgtaaaggagagggtgctgggtgccaagaatgggcgc
gttctcatggagtgccggcccaaggccgccccacgggccaggctgtcatggagcaagggc
accgaactgctctccaactcgtccaggatacacatctgggatgatggcaccctggagatc
ctcaacgtgactcagatggatgaagggaagtacacatgcttcgctgagaacgacaggggc
aaggccaacagcacgggaaccctgttcgtcactgaggcgacaaagatcacactcgcgccg
tccaatgccgacgtgcaggtgggggagagtgcgcgcatgcagtgtgcggcgtctcacgac
cctaacctggacatcaccttcatctgggcgcttggctcccacgtcatcgactttgacaag
gagagcgatcactacgagctcacaaaccgggagtcgagcggagagttgctcatcaggaac
acgctgctgagacacgctgggcgctacacgtgcacggcgcagaccattgtggacaatgtc
agcgcttcggctgagctcgtcgtaagaggccccccaggacccccagggggtgtacgtgtg
gatgagatcacagacaaatctgtgaggctcctttggagccggggcacagacaaccacagc
cccatctccaagtacaccatccaggccagggactccttctcagttgaccccgaggaatgg
aaaaatgccaacaccttaccagccaacgtggagggcaatgctgagacggttacagtggtt
gacctcacaccttggatggaatacgagttccgcgtcatcgccaccaacacgctgggcaca
ggggagccgagtagcccctcccccaagatcagaatgctggaggcagtacccgtggtggct
ccctcagacattggtggaggtggcgagtccagcagagagctaaccatcacttggacgccg
gtcaagcctcagtactactacgggaagaatttcggttacattgtggccttcaaagcccac
gatgactatcagtggagaaaggtgacggttgcggaccccgaggcccaacgctacgtacac
aaggatccctccattccccccaacacagagttccatgtgaaggtgaaagccttcaacaat
aagggcgaggggccctacagtttgacggcttctctattctctgcacaagacgctccctcg
gaagccccatcggatgtgtcaggaagggctctctcagctactgaggccatagtgttttgg
cggcccacccttgagcagagcattgacggctaccaggtgaggtactggaggaagcatgaa
gagagccaggcaggtaccaaggtggtggagaaccagggcgagaaccagacgcggttggag
aacatgctgcccgactcacgttacttcattgaggtgcgggccttcaacaaagctgggatg
ggccccccgagtgtccagtacgagatccacaccaagaaagcgcctccaagccgtcctccc
agaattatcaagaagactttaagcggcagttcagtgaagattgcctgggagcaggtggag
cctttagccaatgaatccaggatagaaggctacaagatcctctacaggcaggaaggtctc
tccaacggcactctgtacaccacaggcaaccgatacatcgacctcccggtgctcagtgac
agggactacgttgtagaggtcagagcgcacagcgaaggtggggatggagcagttgcacaa
gtgcggatttcaggtggagcagaagtcgtggtgcgacccctgagcctggccaccttgctc
cttatcgccctctgctgcctgggaaattga
DBGET
integrated database retrieval system
