Scleropages formosus (Asian bonytongue): 108942354
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Entry
108942354 CDS
T04919
Symbol
bbs4
Name
(RefSeq) Bardet-Biedl syndrome 4 protein
KO
K16531
Bardet-Biedl syndrome 4 protein
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfm03036
]
108942354 (bbs4)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sfm03037
]
108942354 (bbs4)
Chromosome and associated proteins [BR:
sfm03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
108942354 (bbs4)
Cilium and associated proteins [BR:
sfm03037
]
Primary cilia and associated proteins
BBSome
108942354 (bbs4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_19
TPR_11
TPR_14
TPR_16
TPR_17
TPR_9
TPR_12
ANAPC3
TPR_CcmH_CycH
TPR_6
TPR_7
TPR_Slam
ARM_TT21_2nd
TPR_15
Wzy_C_2
ARM_TT21_4th
PknG_TPR
NatA_aux_su
ARM_TT21_N
TPR_20
Coatomer_E
HrpB1_HrpK
ARM_TT21_C
DUF4810
DUF6584
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
108942354
NCBI-ProteinID:
XP_018621181
LinkDB
All DBs
Position
5:complement(28545451..28558457)
Genome browser
AA seq
541 aa
AA seq
DB search
MAEEKSRTDLLLPLVTADKMARPKKAPELPILERRNWLIHLHYIRKDYETCKAIIKEQLQ
ETQGMCEYAIYVQALILRLEGNIQQSLELFQSCAVMSPRSADNLKQVARSLFLLGKHKAA
IEVYNEAARLNQKDWEINHNLGICYIYTKDFKGAEEQLNIALELNKHDLTFMMLGKMYLL
EGNTEKAINVYKSAVEFFPENTELLTTLGLLYMQLGTYQKAFEHLGNALTYDPNNYKAIL
AAGSMMQTHGDFDVAMNKYRVAACAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLA
PFDWKILYNLGLVHLTMQQYASAFHFLSAAINLQPRMGELYMLLAVALTNLDDVENAKRS
YEQAVALDNSNPLVNLNFAILLYNQGDKVGALQQYQEMEKKVNNLWESSSSSSPEFDPEL
VEIAQRMGTALQVGENLIWTRASKDGKTKQRATASSKATGSQQPLGSNQALGQAMSSAAS
YSKAMQLSSGAAHSELEEPEPDVESAPSPPAEPPGPPEAEDPSQASKPKDKKMSKPKAVA
E
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagaaatccagaacggatcttttgcttcctcttgtcacggccgacaagatg
gctcgtccaaaaaaagctccagagttgcccatcctggagaggcgtaactggctcatccac
cttcactacatccgcaaggactacgagacatgcaaggccatcattaaagagcagctccag
gagacccagggaatgtgtgaatatgccatttatgtgcaagctctcatcctgcgtctggag
gggaacatccaacagtccctggagctcttccagagctgtgctgtcatgagcccccgcagt
gctgacaacctgaagcaggttgcccgttccctttttttgctgggcaaacacaaggcagcc
atcgaggtttataatgaagcagcaagactcaatcagaaggactgggagatcaaccataat
ctgggcatctgctacatctacaccaaagacttcaaaggtgctgaagagcagctcaatatt
gccctggagctgaacaagcatgacctgaccttcatgatgcttgggaagatgtacctgctg
gagggaaacacagagaaagccataaatgtgtacaagagtgcagtggagttcttccctgag
aatacagagctgctcacaacgctggggctactgtacatgcagcttggaacctaccagaag
gcatttgagcatcttgggaatgcattgacttatgaccccaacaactataaggccatccta
gcagcgggcagcatgatgcagacgcacggtgactttgatgtggctatgaataagtaccgc
gtggcagcttgcgccgttcccgagagccccccgctctggaacaacatcggcatgtgcttc
tttggcaagaagaaatacgttgcagccatcagctgcctgaaaagggcaaactatctggcc
ccattcgactggaaaatcttgtacaaccttggcctggtgcacctcaccatgcagcagtat
gcctcagcttttcactttctgagtgctgccatcaacctgcagcctcgcatgggagagctc
tacatgctgctggcagtggccctgaccaacctggatgacgtggagaacgccaagaggtcc
tacgaacaggcagtcgcactggacaattcgaacccgctggtgaacctgaactttgccatc
ctgctgtataaccaaggcgacaaggtaggggcgttgcagcaataccaggagatggagaag
aaggtcaacaacctgtgggaaagcagcagcagcagcagccctgagttcgatccagagctg
gtggagatagcccagagaatgggcacggcattgcaggtgggcgagaatctgatatggacc
agagcatccaaggatggcaagaccaagcaacgggctacagcctcgagcaaagcaaccggt
tcccagcagcccctgggcagcaaccaggcacttggacaggccatgtcctcagcagccagc
tacagcaaggccatgcagctctcctcaggcgcagcccacagtgagctggaggagccagaa
cccgatgtggagagtgccccctcgcctcctgctgagccccctggcccccctgaagctgag
gacccctcccaggcttctaaacccaaagacaagaagatgagtaagccgaaggcggtggct
gagtag
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integrated database retrieval system
