Scleropages formosus (Asian bonytongue): 108942365
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Entry
108942365 CDS
T04919
Name
(RefSeq) protocadherin-20-like
KO
K16498
protocadherin delta 1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
108942365
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sfm01009
]
108942365
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfm04515
]
108942365
Protein phosphatases and associated proteins [BR:
sfm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108942365
Cell adhesion molecules [BR:
sfm04515
]
Cadherins
Protocadherins
108942365
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Phage_HK97_TLTM
Motif
Other DBs
NCBI-GeneID:
108942365
NCBI-ProteinID:
XP_018621201
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Position
14:4579231..4582289
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AA seq
870 aa
AA seq
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MFGQHYIGTGKLWGLCILLNFISPFSCFSNFSQAKEIIYKIKEGLPKGTLIGSIGADLKL
DFSVHPPFLFSLALKKISDQYVNLNTTTGELYTSAYEIDREAVCLENADGQSCFLYLDVF
ILPQQYFQLVKVKILVEDINDNKPCFPSSEIQLVIPENAQVNSRFALEQSASDPDAGVNG
VQIYWLVNDYGVFTLDVEENESRELTPILIVTGPLDRETKSEYVTSIIAEDGGNPPLLGM
ATLKIFIADVNDNCPQFTVSHINVTVHGNATKGQHLAGLHAFDPDQGANAQITYVYSERV
PRDVRTLFHLDKATGVIKLGGHVSSALAKLYKLTVLANGPGCIPAVATVTLHIVQDFSGP
PVIILRYIAAEKGGVVSLKESEPPFTPIAFFTVKSTGQNGKVDCQLEAEGPFRLSPYKMF
ENEYLLETTDSLDYEQKQEYELTVMAKDSYGLVMKMFLKLQVIDENDNGPVFQQPLLDLF
LEENNPPNTFLAKLHATDADSDVRGEVVYLLGSDAPLIFALDRLTGVLVVSTSLDREQKE
KYRFTVRAVDCGNPRRETIATVVITVLDRNDNSPRFINKDFTFFVPENFPGFGEIGVLSV
TDADSGKNGWVALSLVNGSDIFVIDAGKGALRAKTSLDREQQGTYFLWIEAVDGGEPSLS
CIIMVTILLLDVNDNPPVVLFPQSNQSYMLVLPSTLPGTSITEVYAVDNDTGMNAVIAYS
IIQRKGGEPGSFDIDPETGNITLKKALSDRGLYSLLVKVSDHGQPEPLYATVMVNLFVNE
TVSNESYVQSLLAREEEIEVDEHFLSRLIERSKKSDFSPCQSALIALSSACLGLLFTVLT
LTTYIFSKKLEKNDKRVRRLETDMSFKSKQ
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgtttggccaacattacatcggcacaggaaagttatggggattgtgcattctcctgaat
ttcatcagccctttctcctgcttttcaaatttcagccaagcaaaagaaatcatctataaa
ataaaggaaggattacccaagggaactctaatagggtccatcggtgctgatttaaagttg
gatttctctgttcatcccccttttttgttcagtctggcattaaagaagatcagcgatcag
tatgtaaacctaaataccacaacaggggaattgtacacatctgcctatgaaatagaccga
gaggcagtctgtttggaaaatgcagacggtcaaagctgcttcttatacttagatgtgttc
attttgccccagcagtacttccaactggtaaaagtcaaaatccttgttgaggacatcaat
gacaataagccctgtttcccctcaagcgaaatccagctggtcattcctgagaacgctcag
gtgaactccaggtttgcactggagcagtcagccagtgaccccgatgctggagttaacgga
gtgcagatctactggctggtcaacgattatggggtcttcactctggatgtggaagaaaac
gagagccgagagctaacacccatcttgattgtgacgggccctctggatagggaaaccaag
agcgaatacgtgacaagcatcattgctgaggatggtgggaacccaccccttctgggaatg
gccaccctaaaaatcttcatagcagatgtgaacgacaactgtccacagtttacggtatcc
cacatcaatgtcacagttcatgggaacgctacgaaagggcagcacttggcaggtctacat
gcctttgatcctgatcaaggagctaatgcccagataacatatgtctacagtgaaagagtg
cctagggatgtgagaacgctctttcatttggataaagccactggggtcattaaactggga
ggtcatgtaagctcagcccttgcaaaattgtataaactgacggttcttgctaatggacca
ggttgcatacctgctgtggccacagtgacactgcatatcgtgcaggatttttctgggccg
ccagttatcattctgcgatatatcgctgctgagaaagggggtgtggtttctttgaaagag
tctgagccaccgttcactccaattgcatttttcacagtgaaaagcacaggtcaaaatgga
aaggtagactgccagctggaagctgaaggcccctttcgactatcaccctacaagatgttt
gagaatgagtacctactggaaaccacagactcactggactatgagcagaaacaggagtat
gaacttacagtgatggccaaggactcctacggcctggtgatgaaaatgtttcttaaactg
caggtaattgatgagaatgataatgggccagtgtttcagcaacctctgttagatttgttt
cttgaggaaaacaatcccccaaacacctttctggccaaactgcatgcgacagatgctgac
agtgatgtccgtggggaagttgtgtatctcctgggatctgacgcaccactgatttttgca
ttggacaggttgaccggagtacttgtggtgtcgacgtcgcttgaccgtgaacagaaggaa
aagtacaggttcacagtaagggcagtggactgcggaaacccacggagggaaaccattgcc
actgtggtcattactgtgttggaccgaaacgataacagtccacgtttcatcaacaaggac
ttcacgttttttgtcccagaaaactttccaggattcggggaaataggagttctttctgtg
accgatgctgattctggaaaaaatggctgggttgctctgtcacttgttaatggtagtgac
atctttgtcatagatgctggtaaaggggccttgagggcaaaaacttccctggatcgggag
cagcagggtacctattttctgtggatcgaagcagttgacggaggggagccctcactctcc
tgcatcatcatggtcacaattctgctccttgacgttaacgacaacccacctgtggttctg
tttccacagtccaaccagtcatacatgcttgtactgccgagtactctaccaggaacttcc
ataacagaggtgtatgctgttgacaatgacacaggcatgaatgctgtaatcgcttacagt
atcatccagagaaagggaggggagccagggtcattcgacatagaccccgaaacaggaaac
atcactttgaaaaaggcattgagcgaccgaggcctgtatagtcttctggtcaaagtcagt
gaccatggccagcccgagcctctttatgcgaccgtaatggtcaacctctttgtcaacgaa
acggtgagcaatgaaagctatgtacagagtctactggcaagggaggaggagattgaagta
gatgaacattttctcagcagactaatagaacgttcaaagaaaagtgatttttctccttgt
cagtctgctttgattgcactctcttcagcatgcctgggacttttatttacagtgttgacg
ctgactacctatatattttccaagaagctagaaaagaatgacaagagagtgaggagactt
gaaacagatatgtcatttaagagcaagcagtag
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