Scleropages formosus (Asian bonytongue): 108942431
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Entry
108942431 CDS
T04919
Name
(RefSeq) CCR4-NOT transcription complex subunit 2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108942431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfm03019
]
108942431
Messenger RNA biogenesis [BR:
sfm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108942431
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
108942431
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
DUF1501
Motif
Other DBs
NCBI-GeneID:
108942431
NCBI-ProteinID:
XP_018621332
UniProt:
A0A8C9R707
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Position
5:complement(23489108..23522621)
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AA seq
520 aa
AA seq
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MFSARKKFLEGVESDYPDESMYYGSQSMFPHRSEKDMLASPSPSSSGQLSQLGASLYGPQ
SALGFPMRSMSSNNPQLSRSLTQGTQLPSHVTSTTGVPTMSLHTPPSPSRGILPMNTRNM
MNHSQVGQGIGMTGRTNSMGSSGLGSPNRSSPSIICMPKQQTSRQAFTINSMSGFGINRN
QGFGMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRSRREGSSNPTPLLNPLAGRAPYV
GMVTKPSNEQSQDFSIHNEDFPALPGPNYKDPTSNNDDSKSNLNSSGKNSSTDGPKFPGD
KSSSAQNNNQQKKGIQVLPDGRVTNIPSGMVTDQFGMIGLLTFIRAAETDPGMVHLALGS
DLTTLGLNLNSPENLYPKFASPWASAPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLSRYG
EDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTVKTNTYERGTYY
FFDCLNWRKVAKEFHLEYDKLEERPHVPSTFNYNPAQQAF
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtgcaagaaagaagtttttagagggggtcgaaagtgactacccagatgaaagc
atgtactacggctcgcaatcgatgttcccacatcgatcggagaaagacatgctggcatcc
ccttcgccatcatcatcaggtcagctgtctcagcttggtgcgagtttatacggcccacaa
agtgcactaggatttcccatgaggagcatgagcagcaacaatccccagctaagccgaagc
ttaacgcagggcacccaactccccagccacgtcacgtccacaacaggggtgccaacaatg
tccctccatactccgccctcgccaagcaggggcattcttcccatgaacacgaggaacatg
atgaatcactcccaggtggggcaaggcatcggcatgacgggcaggaccaacagcatgggc
agctcagggctgggcagtcccaacaggagctcaccaagcattatttgcatgccaaagcag
cagacatcccggcaggccttcaccatcaacagtatgtctggctttggaataaacaggaat
cagggatttggaatgaacaattcattatcaagcaacatcttcaatggaaccgatgggagt
gaaaacgtgacaggactggacctctcggacttccctgcgctggcagacagaagtcggcgg
gaaggaagcagcaacccaactccattgctcaacccgctggctgggcgagcgccgtatgtt
gggatggtcacaaaaccatcaaatgaacagtctcaagacttctccatccataatgaggac
ttccctgcattgccaggccctaactacaaggatcctacgtcaaataacgacgacagcaaa
tctaatttgaactcttcaggcaagaactctagcacggatgggcctaaattcccaggagac
aagagctcatcagcgcaaaacaacaaccagcagaagaaggggatccaggtgttgcctgat
ggccgggttacgaacattccctctgggatggtgacggaccagtttgggatgatcgggttg
ctaacgttcatccgggcagctgaaacagacccagggatggtgcatttggcactaggcagc
gacttgacaacactagggctgaacctcaactcaccagagaatctgtaccccaagtttgcc
tctccttgggcatcggcgccatgtcgaccacaggacatcgacttccatgttccttctgag
tatttaaccaacattcacataagggacaagctggctgcaataaaactgtcgcgatacgga
gaagacctgctgttctacctgtactacatgaatggaggagatctgctgcagctgctggca
gcagtagagctcttcaaccgggactggagataccacaaagaggagcgagtctggatcaca
cgtgcgccaggcatggagcccacagtgaagaccaacacctacgagcgaggaacgtactac
ttctttgactgtcttaactggaggaaggtggctaaggagtttcatctggaatatgacaag
ctggaggagagaccacacgtcccatcaaccttcaactacaacccagcccagcaggccttc
taa
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