Scleropages formosus (Asian bonytongue): 108942571
Help
Entry
108942571 CDS
T04919
Name
(RefSeq) low-density lipoprotein receptor-related protein 6
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04150
mTOR signaling pathway
sfm04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
108942571
04150 mTOR signaling pathway
108942571
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfm04131
]
108942571
Membrane trafficking [BR:
sfm04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
108942571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
SGL
EGF_LRP2
DUF5050
EGF
cEGF
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
108942571
NCBI-ProteinID:
XP_018621508
LinkDB
All DBs
Position
5:858053..892607
Genome browser
AA seq
1462 aa
AA seq
DB search
MYWTDWGEIPKIERAGMDGSSRSIIVDSEIYWPNGLTLDYTELKLYWADAKYNFIHRSSL
DGSLREVVVKGSLPHPFALTLYQDTLFWTDWNTHSIHSCNKKTGEDRQEVHTNIFSPMDL
HVYSEDRQPLALMNPCTLKNGNCSHLCLLSPTKPFYQCACPTGVQLLEDGRTCREGATQL
LLLARRTDLRRISLDTADFTDIVLNTEDIRHAIAIDYDPVEGHVYWTDDDVRAIRRSYLD
GSGSQFLVTSQVHHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLDEPRA
IVLDPVAGYMYWTDWGEVPKIERAALDGTDRVIMVNTSLGWPNGLALDYGERKLYWGDAK
TDKIEVINMDGTERRILVEDKLPHIFGFTLLGDFIYWTDWQRRSIERVHKHSAEREIIVD
QLPDLMGLKATYVHQVFGTNPCAENNGGCSHLCLYKPQGVQCACPIGLELISDMSTCIVP
EAFLLFSRHTDIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDITLKTISRAF
MNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVAKLDGQHRQVLVWKDLDSP
RALALDPAEGFMYWTEWGGKPKIDRAAMDGTGRTTLVDNVGRANGLTIDYAARRLYWTDL
DTTLIESSNMLGLEREVIADDLPHPFGLTQYQDYIYWTDWSQRSIERANKTSGQNRTVIQ
GHLDYVMDILVFHSSRQGGWNACASTNGHCSHLCLAVPVSGFVCGCPAHFTLNSDNKTCS
APTSFLLFSQKTAINRMVIDEQQSPDIVLPIHSLRNVRAIDYDPLHKHLYWIDVKQNVIR
RAQEDGNQSMAVVSSTPGMNSGLGLQPFDLSLDIYSRYIYWTSEVTNVINVTTMDGRRVG
VVLRGEQDKPRGIVVNPERGYMYFTNLQERSPKIERAALDGTEREVLFFTGLGRPVALTL
DNEAGKLFWADTDLRRIESSDLSGANRIVIEDSNILQPVGLTVFGNHLYWIDRQQQMIER
IDKTTREGRTKIQARISSLSDIHAVHELDMKEYSKHPCTSDNGGCSHICIVKGDGTTRCS
CPVHLVLLQDELSCGEPPTCSPEQFSCASGEVDCIPHAWRCDGYAECDDGSDEYDCPVCS
EMEFQCDSRQCVALALRCNGEPNCQDASDESKCSVRCPPDKFRCSNGQCIGRHKKCDHNM
DCSDNSDEIGCYPTEDPPPQPVSVIGSIVGVILALFVVGAVYFVCQRVLCPHMKDDGATM
ANDFVVHGPSSVPLGYVPHPNSLSGSLPGMSRGKSVMSSLSIMGGSSGPPYDRAHVTGAS
SSSSSSTKGTYFPPMLNPPPSPATERSHYTMEFGYSSNSPSTHRSYSYRPYTYRHFAPPT
TPCSTDVCDSDYTPGRRIIPVAKGYASDFNYDSEPFPPPPTPRSQYLSAEENYESCPPSP
YTERSYSHHLYPPPPSPCTDSS
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atgtactggacagactggggggaaattccgaaaattgaacgggcgggaatggatgggtca
agtcgatcaataatcgtggacagcgaaatctactggccaaacggactgacgctggactac
accgagcttaagctttactgggcagatgcaaagtataatttcattcaccgatccagtctg
gatggcagcttgcgggaggtggtagtgaagggctcgctcccacaccccttcgccctcact
ctctaccaggacacactcttctggacagattggaacacccactcaatccattcctgcaac
aagaagacaggcgaggaccggcaggaggtccacaccaacatcttctcccccatggacctc
catgtgtatagcgaggaccggcagccgcttgccctgatgaacccatgtacgttgaagaac
ggcaactgctcccacctatgcctgctctcacccacaaaacccttttaccagtgtgcctgc
cccactggcgtgcagctactggaagatggtcggacctgtcgggagggtgctactcagctg
ttgcttctagcccgacgcacagatttgcgacgcatctctctggatacagctgacttcact
gacattgtgctgaacactgaagacatccggcatgccattgccatcgattacgaccccgtg
gagggccacgtctactggacagatgatgatgtgcgggctatccggcgctcctacttggat
ggtagtgggagccagtttttggtcacttcacaggttcatcacccggatggtattgcggtc
gactgggtggcccgcaacctgtactggacagacacgggcactgaccgcatcgaggtgacc
cgacttaatggtaccatgcgcaagatcctcatctctgaagacctggatgagcccagggct
attgttttggaccctgttgcagggtacatgtactggacggactggggggaggttccgaaa
atcgagcgcgctgccctggatggcactgaccgtgtaatcatggtcaatacctcgctgggt
tggcccaatggtcttgcactggactacggtgagcgaaagctctactggggtgatgccaaa
acggacaaaattgaggtgataaacatggatggcaccgaacgcaggattctagtggaggat
aagctgccccacatctttggttttaccctgttgggagacttcatctactggacggactgg
cagcggagaagcatcgaacgtgtgcacaagcactcagctgaacgtgaaatcattgtggac
cagctacctgatctcatgggcctcaaagccacctatgtgcaccaggtttttggtacgaac
ccctgtgcggagaacaacgggggctgcagccacctgtgcctgtataaaccccagggagta
cagtgcgcctgtcccattggcctggagctcatcagcgacatgagcacctgcattgtgcct
gaggccttcctgctcttctcccgccacactgatatccgccgcatctccctggagaccaac
aacaacaatgtggcaatcccgctcactggtgtcaaggaggcttctgccctggacttcgac
gtcactgacaaccgcatctattggacggacatcacactaaagacaatcagccgggctttc
atgaatggcagtgctttggaacatgtggtggagtttggtctggactaccccgagggcatg
gctgtagactggctggggaagaatctctactgggctgataccggtactaaccgtattgag
gtggccaagctagacggtcagcaccgccaagtcctggtgtggaaggacctggacagccca
cgggccttagccctggatccagcggagggatttatgtactggacggaatggggtggcaag
ccaaaaattgatcgtgcagccatggatggcacaggacgtaccactctggtagacaatgtg
ggccgtgccaatggtctaaccattgactatgctgcacggaggctgtactggactgacctg
gataccacactcatcgaatcctccaacatgcttggcctggagcgagaagtcatagcagat
gatctcccccaccccttcggcttgacccagtaccaggactacatctactggacagactgg
agtcagcgcagcatcgagcgtgccaataagacaagcgggcagaatcgcaccgtcatccag
ggccatttagactacgtaatggacatcctggtcttccactcttcacgccaggggggctgg
aatgcctgtgcctccacaaatggccactgttcccatctctgtttggctgtgccagtcagt
ggctttgtctgtggctgcccagcccactttaccctgaactctgacaacaagacctgcagc
gctcctacttctttcctgctctttagccagaagactgctatcaaccgcatggtcatagat
gaacagcagagtcctgacatcgtcttacccattcacagtctccgcaatgtgcgtgccatc
gattacgacccactccataagcacctttactggatcgatgtaaaacagaatgtcatccgt
cgggctcaggaggatggaaatcagagcatggcagtggtgagcagtacacctggaatgaat
tctggcctgggcctacaaccctttgacctcagccttgatatatatagccgctacatctac
tggaccagcgaggtcaccaatgtcatcaatgttacaacaatggatggccgacgagtgggt
gtagtcctgcgcggggagcaggataagccccgtggcattgtagtcaatccagagagaggg
tacatgtacttcaccaaccttcaggagcggtcccccaaaatagagcgtgcagcactggat
ggcacagagagggaggtgttattcttcactggcctgggccggcctgtggccctgactctg
gacaatgaggccggcaagctgttctgggcagacacagatctgcgccgcatcgagagcagt
gacctctctggggccaaccggatcgttatcgaggactccaacatcctccagccagtgggg
ctcacagtctttgggaaccacctatactggattgaccggcagcagcagatgattgagcgc
attgacaagacaacacgtgaaggccgcactaagatccaggcacgcatatcatcgctgagt
gacatccacgctgtccatgagcttgacatgaaggagtacagcaagcacccctgcacatcg
gacaatggtggctgttctcacatctgcattgtgaagggtgatgggaccacacgctgctcc
tgccctgtacacctggtgctgctgcaggatgaactctcctgtggagagcccccaacatgt
tccccagagcagttctcctgtgcctcaggcgaggtggactgcatcccacatgcctggcga
tgcgatggctatgccgaatgtgatgatggcagtgacgagtatgattgtcctgtatgctcc
gagatggagttccagtgtgacagccgccagtgcgtagccctggccctgcgctgcaatgga
gagcccaactgccaggatgcctctgatgagagcaagtgctcagtccgttgccctcctgat
aagttcaggtgttcaaatgggcagtgcattggaaggcacaagaagtgtgatcataacatg
gactgctcagacaactctgatgaaatcggctgctacccaactgaagatccaccaccccag
cctgtcagcgtcattgggtccattgtgggcgtgatactggcgctatttgtcgtgggagct
gtatactttgtgtgccagcgtgtgctctgcccgcacatgaaggatgacggtgcgacaatg
gccaacgactttgtcgtacacgggccctcttcagtacctctgggatatgtgccacaccca
aattccctgtcaggatctttgccaggtatgtctcgaggaaagtctgtgatgagctctctg
agcatcatgggaggcagcagtgggccaccatacgaccgggcccacgtcacgggggcctcc
tccagcagctcctctagcaccaaaggcacatacttcccaccgatgctgaacccaccacct
tcccctgccacagagcgttcccattacaccatggaatttgggtactcctccaacagcccc
tcaacccaccgttcttacagctataggccgtatacctatcgacactttgcaccgcccact
acgccctgcagcacggatgtgtgcgacagcgactacacccccggccgtcgcatcattcca
gtagccaagggatatgccagcgacttcaactatgactcggagccgttcccaccaccgccc
acaccgcgcagccagtacctgtcagctgaggagaactacgagagctgccccccttcgccc
tacaccgaacgcagctattcccaccacctgtatcctccacctccctctccctgcacagac
tcatcctga
DBGET
integrated database retrieval system
