Scleropages formosus (Asian bonytongue): 108942623
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Entry
108942623 CDS
T04919
Symbol
nvl
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear valosin-containing protein-like
KO
K14571
ribosome biogenesis ATPase
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108942623 (nvl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfm03009
]
108942623 (nvl)
Ribosome biogenesis [BR:
sfm03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
108942623 (nvl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
AAA_16
AAA_22
RuvB_N
AAA_2
AAA_5
NPHP3_N
Mg_chelatase
AAA_14
AAA_33
TIP49
RNA_helicase
Vps4_C
AAA_28
nSTAND3
IstB_IS21
ABC_tran
AAA_18
Rad17
Zeta_toxin
TsaE
AAA_17
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
108942623
NCBI-ProteinID:
XP_029109770
LinkDB
All DBs
Position
8:complement(9012441..9022019)
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AA seq
922 aa
AA seq
DB search
MMKNRSGSGVDKRLRQRVEQYLSTHDSQYVDLVTVAADLQKLYRMDYGRRNKTAFRIQVE
KVYGVICGESGIVGLENKHLAKRARHSQDPEMDDDSDTDKNSSDSEADVPDNPFTNHMNN
SLMSLYRKGAPESGTPQREKPTGGSVANSTAVSATKVSSGGWFIDKGRGAEDDNILIDLC
EEDAGSPVQKQTDVSMLEAEKKPKKNRVKRGKRRKEGELLVADGVIESSVKDAKARTKAP
ELQHPSVTFEDIGGNEEMLKEVCKLLIHMRHPEVYQQLGVVPPRGFLLHGPPGCGKTLLA
HAVAGVSSVSAITRSGDPCFAYSTSLLSXGLXGDXDFLHMFMQEMALPLLKVSAPELVSG
VSGESEQKLRELFEQAVTNAPCILFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNS
LAVTAQVLVIGATNRPDSLDPALRRAGRFDREVCLGIPDEGARLRILKTLCRKLTLPTDF
DFQLLARLTPGYVGADLMALCREAAMNAVNRALFQLKQKDLQVNTSEPLTQNGLLSPAQV
VAAQDSNTSAPEAQILHTLCPGSHEITDMSLPEEGALPTLATTPAQDELCSLLSLLKSDT
ALSGEQLSNLCILMSDFQESLSCVQPSAKREGFATVPDVTWADIGALQDIREELTMAILA
PVRSPEQFKALGLTAPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGES
ERAVRQVFQRGRNSXPCVIFFDEIDALCPRRSGHESGASVRVVNQLLTEMDGLETRRQVF
IMAATNRPDIIDPAVLRPGRLDKTLYVGLPLPSDRHAILLTVTKGGMRPPLEADVNLEEI
AYDERCDCFTGADLSALVREASVNALRAHLDSCSTDHTFSSNSVVDIRVSRQNFEDAFKK
VRPSVSKKDQRMYEQLKDSLMR
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaacagaagtggcagcggagttgacaagagactcagacagagggttgagcag
tacctcagcacacatgacagccagtatgttgaccttgtcacagttgcagcagacctgcag
aaactttacagaatggattatgggcgtcggaataaaacggcttttaggattcaggtggaa
aaagtgtatggagtgatatgtggtgagtcaggcattgtgggtctggagaacaagcacttg
gccaaaagagccaggcacagccaggaccctgaaatggatgacgacagtgacacggacaaa
aactcttcagacagcgaagcagacgttcctgataatccgttcacaaatcacatgaacaac
tcgctgatgtccctgtaccggaaaggggccccagagagcggtactccacagagagagaag
cctacgggtggttctgttgcaaacagcactgctgtttcagccaccaaagtgtccagtgga
ggctggttcattgataagggtcgtggcgcagaggacgacaacatcctcattgacctgtgt
gaggaagatgccggaagccctgtgcagaagcaaactgatgtgtcgatgctagaggcagag
aagaaaccaaagaagaaccgagtgaaaagaggaaaaaggaggaaggagggagagctgctg
gttgctgatggagtgatagagtccagtgtaaaggatgcaaaagcgagaacgaaagcgcca
gaactgcagcatcccagtgtgacgtttgaggatattggtggaaatgaggagatgttgaag
gaagtgtgcaagttgctcatccacatgaggcacccggaggtgtaccagcagctcggcgtg
gttcccccacgtgggttcctcctgcatggcccacctggctgtgggaagactctgcttgcc
cacgctgtggctggggtgagtagtgttagtgccattactaggtctggagacccatgcttt
gcgtattccacgtcacttctctcctagggtctgtgaggtgactaagatttcttgcacatg
tttatgcaggagatggcgctgcctctgctgaaggtgtctgccccagaactggtgtcaggg
gtgtctggggagtcagagcagaagctgcgggagctttttgaacaggcagtaaccaatgca
ccatgcatcttattcatcgatgagattgatgctatcacccctaagagggaggtagcatcc
aaggacatggagaggagaattgtggctcaactgcttacttgcatggatgacctgaactcg
ctggcggtcactgcacaggtactggtcataggtgccaccaatcggccagactccttggac
ccagcgctccgcagggcaggtcgctttgaccgggaggtctgcctgggcatccccgatgaa
ggggcccgcctcaggatcttgaaaactctttgccgcaagctcaccctccccacagacttt
gactttcagctgctcgctcgcctcaccccaggctacgtgggggctgacctaatggcgctt
tgtcgcgaagcagctatgaatgctgtgaacagggcattatttcagctcaagcagaaggat
ttgcaggtgaacacatctgaacccctgacccaaaacggattgctctcaccagctcaggtg
gttgcagcacaggacagtaatacctctgcgcccgaggcacagatccttcacactttgtgt
ccaggatcacatgagataactgacatgagtcttcctgaggaaggagccctgcccactttg
gcaaccactcctgcacaggatgagctgtgcagccttctgtctctcctgaagagcgatact
gccctttctggggagcagctatcaaacctttgtatcctcatgtcggatttccaggaatcc
ttgtcttgcgtgcagccctcagccaagagggaaggctttgcaaccgtgcctgatgtcaca
tgggccgacattggtgctctgcaggacatccgcgaggagctcaccatggccatcctggct
ccagttcgcagtccagagcagtttaaggccttgggcctcactgctcctgcaggggtactg
cttgccggaccccccggctgtgggaagaccctgcttgctaaggctgttgccaatgaatcg
ggtttgaacttcatctcagtaaaaggaccagagctgctgaacatgtacgttggagagagt
gaacgggctgtccggcaagtatttcagagaggccggaactctngcccctgtgtcattttc
tttgacgagattgatgctctttgtcctcgtcgctctgggcatgagtctggggccagtgtt
cgcgttgtcaaccagcttctcacagagatggatggcttggagactcgtcggcaggtcttc
ataatggctgccactaacaggccagatatcattgaccctgcagtgctccgaccaggtcgc
cttgacaagaccctgtatgtgggcctgccccttccatctgacaggcatgccatcttactt
acagtgacaaagggtggtatgaggcctccgctggaggcagatgtcaacctggaagagatt
gcctacgatgagcgctgtgactgtttcacgggggccgacctgtcagcactagtgagagag
gcctctgtaaatgctctcagggctcatctggactcctgctccacagatcacactttttct
tcaaactctgtggtggatataagagtcagcagacagaactttgaagatgccttcaaaaaa
gttcgcccatctgtatccaaaaaagaccagagaatgtatgagcagctgaaggactcactg
atgagatga
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