Scleropages formosus (Asian bonytongue): 108942675
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Entry
108942675 CDS
T04919
Symbol
tarbp1
Name
(RefSeq) probable methyltransferase TARBP1 isoform X1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfm03016
]
108942675 (tarbp1)
03036 Chromosome and associated proteins [BR:
sfm03036
]
108942675 (tarbp1)
Enzymes [BR:
sfm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
108942675 (tarbp1)
Transfer RNA biogenesis [BR:
sfm03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
108942675 (tarbp1)
Chromosome and associated proteins [BR:
sfm03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
108942675 (tarbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
Motif
Other DBs
NCBI-GeneID:
108942675
NCBI-ProteinID:
XP_029110148
LinkDB
All DBs
Position
8:3302394..3321370
Genome browser
AA seq
1650 aa
AA seq
DB search
MSSLLVEALVSNCSDPRVVLNALCWSTDTCPEPERVEGLAVLMGKMAKLPGYRDSREAGS
AERADFQRRVADVAWELCVPLLCRLCREREWVSSQEEEQEGGTAEGRRRELLSAACRLLG
VCVRVCGPELSERLVRSALPALRPPDADVDCDAAAAAGGNAPCPGRLDADVAVELLAAVS
PALSPRQPPCAELLSSLLDFLKWSPDPLASKALVRVLLALLRDDDDDDDEGTERHLLLER
CWAELCGWRASALTARALLCLAALSDRLFPRATAAAGSRPGRCDPWRSEPFWKIVQEGVT
LRDAVSRKRAVFLLKRGVAAAQEEALEVRSAQATDTNDSLFRWVPSKSHLLREFWEDYTL
VMETLDENQIHVVRPVLNRINTLIETTVSSSQGATLLHPSWLLCVYQRMFHSENKAVMRE
GVCHLLQLGMLCRPSFALAFAQFIVGPFMDVLAESSLFHRSPGQSIGECPDLGTRLQGFM
ISFFGGLPQEKRSGVLLQLIRRLASRHWGAVPILFLAQALSRIPPGPILGPDGLQALREV
LQSTMITHQVLLRGAAQCFLLQSTLSLTDVSSMTLTEVFSFLTNFRVEESLCRGTALWDQ
VCDWLLDNERSFKPDPQLEPPTESVNVALDREPVQGFVYTQLKAFLRVPPCSEPTGSLPD
PWDAELVARVVLLSADVAKRRPGGLATEGLEVLLHPLMDILRRLSTNAYVPLRKADRSLQ
LLVRVLQLRRGGDSWDAQTRADDKVASTIERCVLGVTEQIQEYILRRLSGELCELCDVER
AELYHSVLMELVHMYTCVGWHRTSRLGSFVPTLTRRCLRILTEPLEKNCTVRGQVRRAVS
MASLALLCQVGERHRPDLHPDAVCALSSVAKLFYSSNSSVAHLNQNLPKPAVTSDSLDGG
PQEHLSFEGWGRMAARFVRDQWTCLRFLLNANIVSEVAELPPASLTLEAAVEALGLLPSD
LVLPVLDCMVVLLPQQVAQVKESLCVEAVMLALTVVLGLSSNPHDFWPSLEGFIRFAFTR
GVLELADAEAPRLTATLQQVASELMELSQTKTGVFNVLIRHCCHSWLSPDQRNGIQAHVL
LPSALSHLDILAEACVHGPVFRKDQRLIQEIQTYVEQLGGKCTANAVVTSDGRDEQFPRL
RVLAFLSQLEASHPLHQRLIEELVLRLLKKDEEISKSKVRYYGNSLQHRVKNRVWQTLLV
LLPKLSKEFVVTILSRVYEAGFCSNQASVKYLVEWMIILLLHRHPGLMDSLWKCFGVNQE
KTKTSICTFLSVLVHLNVLLPNVQDKVGLWRKALDVILQWCFSHNFSIRLYALLALKKVW
NLKDVRVNTKDVAGGPDGLGGLAAVVQACLQQAEAMQTTGNAVKNWTRIQDHFFFGTFHP
LKDYSIETIFYTFPSLSELADDEWIPVWKFERLVEFPQNSVLPLRNPRQDLSQLHPGDWV
QQDKVEAEREERWAEVQKKMTPWRLSIQEQDPELQLALQQRAARLGKRHSALLVVASLID
KPTNLGGLCRTCEIFGASTLVLDSLRHVSDKNFQALSVSAELWLPLLEVRPTDLVDFLQL
KKREGYCIVGVEQTANSQSLQGYRFPAKTLLLLGNEREGIPANLLQLLDVCVEIPQHGVT
RSLNVHVSAALLVWEYTRQHLSSGAQIAES
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atgagttctctgctcgtggaggcgctcgtgtcgaattgctcggaccctcgtgtggttctg
aacgcgctgtgctggtccacagacacgtgtccggaaccggagcgggtggaagggctcgct
gtgttaatgggcaaaatggctaaattgccggggtaccgcgactcgcgcgaggcgggctcc
gcggaaagagcggacttccagcggagggtcgcggacgtagcgtgggagctgtgcgtgccg
ctgctgtgcaggctgtgccgcgagcgcgagtgggtgagttcacaggaggaggaacaggaa
ggtgggactgctgaggggcggaggagggagctgctaagtgcggcgtgccgcctgctgggg
gtctgcgtccgggtgtgtggcccggagctctcggagaggctggtgcgctcagcgctgccg
gcgctgcggccgcccgatgccgatgttgactgcgatgcggcggccgccgccgggggaaac
gctccgtgtccggggcgcttggacgcggacgttgccgtggagctgctcgccgcagtgtcc
cccgcactgtcgccgcgacagccgccctgcgcggagctcctctcctccctcctcgacttc
ctgaagtggagcccggaccccctggcctccaaagccttggtgcgcgtgctcctcgcgctg
ctccgcgacgacgacgatgacgatgacgaaggcaccgaaaggcacctgctgctcgagcgc
tgctgggcggagctgtgcggctggcgcgcgtccgcgctgacggcgcgcgccctgctgtgt
ctcgcggcgctctcggaccgcctgtttccccgcgcgacggcggcggcggggtcccgaccc
gggcgctgcgatccctggcggtcggagcccttctggaagatcgtccaagagggagtgacg
ctgagggacgcggtgtcccgcaaaagggcggtgtttctcctcaagaggggcgtggccgcg
gcgcaggaggaggcgctcgaggtccgcagcgcgcaggcgactgacacgaacgacagttta
ttccggtgggtgcccagcaagagccatcttctccgggaattctgggaggactacacttta
gtcatggagaccctggatgaaaaccagattcatgtggtccggccggtcctcaataggatt
aacacactgattgagactacagtgagcagcagtcaaggtgccaccttgcttcacccctcc
tggctgctgtgtgtgtatcagcgcatgttccacagcgagaacaaggcagtgatgagggaa
ggggtgtgccacctgctgcagctgggcatgctgtgcagacccagcttcgccctggccttt
gcgcagttcattgtgggtcctttcatggatgttcttgctgagagttcactgtttcacagg
tcacctgggcagagcattggggagtgtcctgacctggggaccaggctgcaaggcttcatg
atcagtttctttggtggactgcctcaggagaagagaagtggtgtcctgctgcagctgatc
cggcggctggcgtctcgccactggggcgccgtccccatcctgttcctagcccaggccttg
tcccggatcccacccggccccattcttggacccgacggcttacaggcactcagagaggtg
ttacaatccaccatgatcactcaccaggtccttcttcgaggagctgcacagtgttttctt
ctgcagagcaccctttctttgaccgatgtgagctccatgaccctgaccgaagtctttagc
ttcctaacaaacttccgcgtagaggagtcgttatgccgtgggacagctctatgggaccag
gtgtgtgactggcttctggacaatgagaggagctttaaaccggacccgcagcttgagcca
ccgaccgagagtgttaatgtagcccttgacagagagccagtccagggatttgtttacacc
cagctgaaggcttttctcagagtcccaccctgctctgagcccacaggtagcctgccggac
ccttgggatgcagagctcgtagcccgcgtagtcttgctgtcagcagacgtggcgaagagg
agacctggggggttggctacagaggggctggaggtgttgctgcaccccttgatggacatc
ctgcgcaggctcagcactaacgcctacgtgcccctgcgcaaggccgaccggagcctgcag
ctgttggtgcgagtgctccagctgcgacgcggaggagacagctgggatgcgcagacacgg
gcggacgacaaggttgcgagcaccatcgagaggtgtgtgctgggcgtgactgagcaaatc
caggagtacattctacggaggctgagtggggagctgtgtgagctctgtgatgtggagcga
gccgaactgtaccattcagtcctgatggagctggtccacatgtacacctgtgttgggtgg
catcgcacaagccggttaggaagttttgttccaacgctgacgcgacgctgcctgcggatc
ctgacagagccgctagagaagaattgcaccgtgcgtggacaagtgcgaagggctgtttcc
atggcatcacttgcacttctctgtcaagtgggggagaggcacagaccggaccttcatccc
gatgctgtgtgtgccctgtcttccgtggccaagctgttttattcctctaactcctcagtg
gcgcaccttaaccaaaacctgccaaagccagcggtcacttctgattccctggacgggggc
ccgcaggagcatctgtccttcgagggctggggtcgtatggccgcacgctttgtgcgggac
cagtggacctgcctgaggttcctgctcaacgccaacatcgtgtcggaagtcgcagagctc
cccccggcatctctcactctggaagctgcagtggaggcattgggcttgctgcccagtgac
ctggtgttgcctgtgctggactgcatggtggtgctgctgccacagcaggtggcacaagtc
aaggaaagcctatgtgtggaggcagtaatgttggctctgacggttgtgctgggtctcagc
agtaacccccatgacttctggccttctctggaaggatttatacgttttgctttcacccgt
ggggtactggagctcgctgacgccgaagccccgaggctcacagccactttgcagcaggtg
gcctccgagctgatggagctgtctcagaccaagacgggggtgttcaacgtgctgatccgg
cactgctgccactcctggctgagccctgaccagaggaacggaatccaagcacacgtcctg
ctccccagtgcgctctcgcacctggatatcctagcagaggcttgtgtccatgggcctgtt
ttcaggaaagatcagaggttgatccaggaaattcagacatatgtggagcagctgggcggg
aagtgtacggcgaatgccgttgtcaccagtgacggcagagatgaacagttccctcgtctg
cgtgtgctggcctttctcagccagcttgaggcctcccatccccttcaccagcgcctgatc
gaggagctcgtgctgaggctgctgaaaaaggatgaggagatatcaaagtcgaaagtacgt
tactatggcaactccctgcagcatcgggtgaagaaccgggtgtggcagactcttctggtg
ttgctgccaaaactgagcaaggagtttgtggtgactatcctgagccgcgtgtatgaggct
ggcttctgcagcaaccaggcctctgttaagtacctggtagagtggatgatcattctcctc
ctccatcgccaccctgggctcatggacagtttgtggaaatgctttggtgtgaatcaagag
aagaccaagacaagtatctgtacctttctatccgtgttggtgcacctgaatgtccttctg
cccaacgtacaggacaaggttgggctgtggcggaaggctctggatgtaattttgcagtgg
tgtttcagccacaacttcagcattcgcctctatgccctgctagccctaaagaaggtgtgg
aacctcaaggatgtgagagtaaacactaaagatgtggcaggtggtcccgatgggttgggg
gggcttgcagctgtggttcaggcctgtctacagcaagctgaagccatgcagaccacaggg
aatgcagtaaagaactggaccagaatccaggaccacttctttttcgggacttttcatcct
ctgaaggactatagtattgaaaccatattctacaccttccctagcctgtcagagttggct
gatgatgaatggattccagtctggaaatttgaaagactagtggaatttccccagaattct
gtgcttccattgcggaacccaaggcaggacctgagccaactgcatccaggggactgggtc
cagcaggacaaagtggaggcggaacgggaagagcgatgggcagaggtgcagaagaagatg
acgccatggagactgagcatccaggagcaggaccctgagctgcaacttgccctccagcag
agggctgcccgcctgggcaagcgccacagtgccctcctggtggtcgcctcactcatcgac
aagcccaccaacctgggtggcctgtgcaggacttgcgagatctttggcgccagcactctg
gtgttagacagccttcgtcatgtcagcgacaagaacttccaggctctaagtgtgtcggct
gagctctggctccccttgttggaggtcaggcccacagatctagttgacttcctgcagctg
aagaagagggagggctactgcattgtgggagtggaacagactgcaaacagccaaagtctg
caaggttacagattccctgcaaagaccctgctgctgctgggcaatgaacgcgagggcatc
ccggccaacctgctgcagctgctggacgtgtgtgtggaaataccgcagcatggtgtcacc
cgatccctcaacgtgcacgtgagcgccgccctgctggtgtgggagtacacgagacaacac
ctgagttctggggctcagatcgcggaatcgtga
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