Scleropages formosus (Asian bonytongue): 108942763
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Entry
108942763 CDS
T04919
Symbol
ldb3
Name
(RefSeq) LIM domain-binding protein 3 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108942763 (ldb3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sfm04990
]
108942763 (ldb3)
Domain-containing proteins not elsewhere classified [BR:
sfm04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
108942763 (ldb3)
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GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
108942763
NCBI-ProteinID:
XP_018621800
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All DBs
Position
8:7034496..7086159
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AA seq
678 aa
AA seq
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MSAYNVMLSGPAPWGFRLQGGKDFNMPLTISRITPGSKAAQGNLIPGDIIVAIDGVSTEG
MTHLEAQNKIKCASFNLSLTMQRSKRPAPIPTVPMPTRIDISKPIIPHQKVIINTPANNE
YVPSFSPSALKDSALSTHKPIEVKGPGGKATIIHAQYNTPISMYSQDAIMDAIAGQAQAR
GSDLSSSDTPAISSPLATPVEHAPVSTSPTPASLPAAAASPSQPASAPQSLADQVPPSPP
AAQTPVAATPTSKSSNAPPSSAAPSSGPRHLSLAASTISSALSAQSRNYVSKPGPPPTSA
LEALPITPVFRTRSLPERTPTLPSGKPKRLSFNMQTSSGYSSQFKSTPSRPYGQPPSLQQ
SSIEIPMGPPPAKVVSTATIVPTAYPAAPAPAPAPIHIPAPAPPPAASVPTASGRPPWIS
DSSFAQKFDPSKTTTTSVKVQPLPQAAPPPPTYIPNPTQAPPAPSPAYNPSPVSAPAPFP
PVARGVAQRAERFAASSRTPLCAACNSIIRGPFLVALGRSWHPEEFNCHYCHTSLADVCF
VEEQNNVYCESCYREFFAPTCARCSTKIMGEVMHALRQTWHTTCFVCAACGKPFGNSLFH
MEDGEPYCEKDYVALFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFVCAVCHINLEGQPF
YSKKDKPLCKKHAHAINV
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcttacaacgtaatgctgagtggtcctgccccatggggcttccggctgcagggg
ggcaaggacttcaacatgcccctcaccatctctaggattactccagggagcaaagcagca
cagggcaacctgatcccgggtgacattatcgtggccatcgacggggtcagcacggagggc
atgacccatctggaggctcaaaacaagattaagtgtgccagcttcaatctttccctcacc
atgcaaaggtcaaaacgcccagctccaatacccactgttccaatgcccacaagaattgac
atctccaaacccatcatcccacaccagaaggtcatcatcaacacccctgccaacaatgag
tacgttcccagcttcagccccagtgcattgaaggactccgccttgtctacccacaagccc
atcgaggtcaagggtcccggtggcaaggcaaccatcattcatgcccagtacaacacccct
attagcatgtactcccaggatgctataatggatgccatagctggccaggctcaggccaga
ggcagtgatttatccagcagcgacaccccagctatcagctctccccttgctactcctgtt
gagcatgccccagtctccacaagcccaacgcctgcttctctgcccgctgctgctgcttcg
cccagccaacctgcttccgcaccacagagccttgccgatcaggtgccgccttctcctcct
gccgcccagactccggtggctgctacccccacctcaaagagctcgaatgcacccccatcc
tcagcggccccatcttcaggacctcgccacctgtcgcttgctgcctctactatctcctct
gctctctctgcacagtctagaaactatgttagtaagccagggccaccaccgacctcggca
ctggaggccctgccaatcacccctgtcttccgcacccgatctctgcccgaacgaacaccc
actctgccctctgggaagcccaagcgcttgagcttcaacatgcagacttcctctggttac
agctcccagttcaaatccaccccctccaggccctatggccaacccccatccctgcagcaa
agttccatcgagatccccatgggcccacccccagccaaggttgtcagcacagccaccatt
gtgcctaccgcctaccctgctgctccagctccagccccagcccccatccacatccctgct
ccagcccctcctcctgccgcctctgttcccaccgcatccggcaggcctccctggatctcc
gacagcagctttgctcagaagtttgaccctagcaagactactaccaccagtgtcaaagtt
cagcctctgccccaggcggcaccccctcctccaacctatatcccaaaccccacccaggcc
cctcctgccccaagcccagcctacaacccttcccctgtctctgcccccgcccccttccca
ccagtagcacgtggggtggcccagagagccgaacggtttgccgccagcagtcggacacct
ctctgtgcagcctgcaacagcatcatcaggggaccttttctggtggcactgggtcggtcc
tggcacccagaggagtttaattgccactactgccacacctcgctggcagatgtctgcttt
gtggaggagcagaacaatgtgtactgtgagagctgctacagggagttcttcgcccccacc
tgcgcccggtgtagtaccaagatcatgggggaagtgatgcacgcgctgcggcagacttgg
cacaccacatgctttgtgtgtgccgcctgcggcaagccgtttggcaacagcctcttccac
atggaggacggcgagccctactgtgagaaagattacgttgccctcttcagtaccaagtgc
cacggctgtgacttcccagtggaggccggagacaagtttatcgaagcactgggccacacc
tggcacgatacctgcttcgtctgcgcggtgtgccacatcaacctggaaggccaaccattc
tactccaagaaggacaaacccttatgcaagaagcatgcccatgccatcaatgtgtag
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