Scleropages formosus (Asian bonytongue): 114909792
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Entry
114909792 CDS
T04919
Name
(RefSeq) ATP-dependent RNA helicase DDX18-like
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfm03041
]
114909792
03009 Ribosome biogenesis [BR:
sfm03009
]
114909792
Enzymes [BR:
sfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114909792
Spliceosome [BR:
sfm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
114909792
Ribosome biogenesis [BR:
sfm03009
]
Eukaryotic type
90S particles
Helicases
114909792
Pre-60S particles
114909792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
114909792
NCBI-ProteinID:
XP_029105428
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MMEQEEEDGSHRSPRGAEQSGPGSRSREVHSVEGESETEEEMSKNDDKEEEEEQQLPLGL
TGAFEDTSFESLAGMVSENTLKGVKDMGFQHMTEIQHKTIRPLLEGRDVLAAAKTGSGKT
LAFLIPSIELIYKLKFMPRNGTGVIILSPTRELAMQTYGVMKELMAHHVHTYGLIMGGSN
RSAEAQKLANGINILVATPGRLLDHLQNTPGFMYKNLQCLIIDEADRILEVGFEEELKQI
IKLLPKRRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDNKEKATVDGLEQGYVVCSSE
KRFLLLFTFLKKNRKKKLMVFFSSCMSVKFHYELLNYIDLPVMAIHGKQKQTKRTTTFFQ
FCNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGINGRGHALLIL
RPEELGFLRFLKQAKVPLSEFEFSWSKISDIQSQLEKLIEKNYYLHKSAQEAYKSYVRAY
DSHSLKQIYSVNTLDLQKVALSFGFKVPPYVDLNVNSSKGIKLQKRGGGGGFGYQKSKNV
HKSKIFKHVSKGKSDKRQFSR
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgatggagcaagaggaggaagatggttctcacagaagtcccagaggtgcagaacaatct
ggaccggggtccaggagcagagaggttcacagcgtggaaggggaatcggagactgaagag
gagatgagcaagaatgatgacaaagaggaagaagaagagcagcagcttccactaggactt
actggtgcttttgaggacacgtcctttgaatctctggctgggatggtgagtgagaacacc
ctgaagggagtgaaggacatgggtttccagcacatgacagagattcagcacaagaccatc
cggcccttgctggagggcagggatgtcttggcggctgctaaaactggaagtgggaaaacg
ctggccttcctcattccgtcaattgagctcatttacaagctgaagttcatgcccagaaat
ggcacgggggtgatcattctgtcacccacccgagagctggccatgcagacgtatggggtg
atgaaggaactgatggctcaccatgtgcacacttatggcctcatcatgggtggcagcaac
cgctctgcagaggctcagaagttggccaatggcatcaacattcttgtagccaccccaggg
aggctgctagaccacttgcagaacacacctgggttcatgtacaagaacctccagtgcctg
atcatcgatgaagctgaccgcattctggaagtgggatttgaagaggagctcaagcagatc
attaaacttttgccaaagcgaaggcagactatgctgttctctgccacgcaaacccgcaaa
gtggaagatctggccaggatctctctgaaaaaagagcctttgtatgtaggtgtggatgac
aacaaagaaaaggcaacagtggatggcctggagcagggctatgtggtgtgttcttccgag
aagaggttcttgttgctcttcaccttcctgaagaagaaccgcaagaagaagctcatggtt
ttcttctcttcctgcatgtcagtcaagttccactatgagctgctaaattacattgacctc
cctgtcatggccattcatggtaagcagaagcagacaaagcgaaccaccaccttcttccag
ttctgcaacgcagactctggtatcctgctctgcactgatgtggcagccaggggcttggac
atcccagaggttgattggatcgttcagtatgaccctccagatgaccccaaggaatacatt
caccgcgttggtaggacagctcgtgggattaatggaagaggccacgccctcctaatcctc
aggcctgaggaactgggcttccttcggtttctgaaacaagcgaaggttccactgagtgag
tttgaattctcctggagcaaaatatcagatattcagtcccagctggagaagctcatcgag
aagaactactatctgcacaagtcagcacaggaggcatataagtcgtatgtgcgagcgtat
gactctcactccttgaagcagatctacagtgtcaacaccctagacctccagaaggtggcg
ctgtcttttggctttaaagttcctccttatgttgacctcaatgtgaacagcagcaaggga
ataaagctacagaagagaggtggaggcggtggctttggctaccagaagtccaagaatgtg
cacaaatccaagatcttcaagcatgtgagcaaaggcaagagtgacaaaagacaattttcc
cgctaa
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