Scleropages formosus (Asian bonytongue): 114910567
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Entry
114910567 CDS
T04919
Name
(RefSeq) low-density lipoprotein receptor-related protein 6-like
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04150
mTOR signaling pathway
sfm04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
114910567
04150 mTOR signaling pathway
114910567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfm04131
]
114910567
Membrane trafficking [BR:
sfm04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
114910567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
SGL
EGF_LRP2
DUF5050
EGF
cEGF
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
114910567
NCBI-ProteinID:
XP_029108061
LinkDB
All DBs
Position
5:1281588..1321479
Genome browser
AA seq
1621 aa
AA seq
DB search
MGAVVRSGELLRLALVLLATVCPLTRGTPLLLYANRRDLRLVDAAQSKGNATVVVSGLED
AAAVDFVFDHGLIYWSDVSEEAIKCISLNQSAGPPITVVSGLASPDGLACDWLGAKLYWT
DSETNRIEVAELDGSLRKVLFWQDLDQPRAIALDPARGYMYWTDWGEIPKIERAGMDGSS
RSIIVDSEIYWPNGLTLDYTELKLYWADAKYNFIHRSSLDGSLREVVVKGSLPHPFALTL
YQDTLFWTDWNTHSIHSCNKKTGEDRQEVHTNIFSPMDLHVYSEDRQPLALMNPCTLKNG
NCSHLCLLSPTKPFYQCACPTGVQLLEDGRTCREGATQLLLLARRTDLRRISLDTADFTD
IVLNTEDIRHAIAIDYDPVEGHVYWTDDDVRAIRRSYLDGSGSQFLVTSQVHHPDGIAVD
WVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLDEPRAIVLDPVAGYMYWTDWGEVPKI
ERAALDGTDRVIMVNTSLGWPNGLALDYGERKLYWGDAKTDKIEVINMDGTERRILVEDK
LPHIFGFTLLGDFIYWTDWQRRSIERVHKHSAEREIIVDQLPDLMGLKATYVHQVFGTNP
CAENNGGCSHLCLYKPQGVQCACPIGLELISDMSTCIVPEAFLLFSRHTDIRRISLETNN
NNVAIPLTGVKEASALDFDVTDNRIYWTDITLKTISRAFMNGSALEHVVEFGLDYPEGMA
VDWLGKNLYWADTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKP
KIDRAAMDGTGRTTLVDNVGRANGLTIDYAARRLYWTDLDTTLIESSNMLGLEREVIADD
LPHPFGLTQYQDYIYWTDWSQRSIERANKTSGQNRTVIQGHLDYVMDILVFHSSRQGGWN
ACASTNGHCSHLCLAVPVSGFVCGCPAHFTLNSDNKTCSAPTSFLLFSQKTAINRMVIDE
QQSPDIVLPIHSLRNVRAIDYDPLHKHLYWIDVKQNVIRRAQEDGNQSMAVVSSTPGMNS
GLGLQPFDLSLDIYSRYIYWTSEVTNVINVTTMDGRRVGVVLRGEQDKPRGIVVNPERGY
MYFTNLQERSPKIERAALDGTEREVLFFTGLGRPVALTLDNEAGKLFWADTDLRRIESSD
LSGANRIVIEDSNILQPVGLTVFGNHLYWIDRQQQMIERIDKTTREGRTKIQARISSLSD
IHAVHELDMKEYSKHPCTSDNGGCSHICIVKGDGTTRCSCPVHLVLLQDELSCGEPPTCS
PEQFSCASGEVDCIPHAWRCDGYAECDDGSDEYDCPVCSEMEFQCDSRQCVALALRCNGE
PNCQDASDESKCSVRCPPDKFRCSNGQCIGRHKKCDHNMDCSDNSDEIGCYPTEDPPPQP
VSVIGSIVGVILALFVVGAVYFVCQRVLCPHMKDDGATMANDFVVHGPSSVPLGYVPHPN
SLSGSLPGMSRGKSVMSSLSIMGGSSGPPYDRAHVTGASSSSSSSTKGTYFPPMLNPPPS
PATERSHYTMEFGYSSNSPSTHRSYSYRPYTYRHFAPPTTPCSTDVCDSDYTPGRRIIPV
AKGYASDFNYDSEPFPPPPTPRSQYLSAEENYESCPPSPYTERSYSHHLYPPPPSPCTDS
S
NT seq
4866 nt
NT seq
+upstream
nt +downstream
nt
atgggcgccgtggtgcggagcggcgagctgctgcggctcgcgctcgtgctgcttgcaacg
gtttgtccgctgacacgaggcacgccactgctgctgtatgcaaaccggcgggacttacgg
ttggtggatgcagcgcagagcaagggcaatgctacggtggtggtgagcggcctggaggat
gcggcagccgtggacttcgtctttgaccatggtctcatctattggagcgatgtcagtgag
gaggccatcaagtgcatctccctgaaccaatcggctggcccccccataacagtggtatca
ggcttggcctcacctgatggtctggcctgcgattggcttggagccaagctttactggacc
gactcagagaccaaccgcattgaggtggcagaacttgatgggtctttacgcaaagtgctc
ttctggcaggacttggaccagccaagggctatagccctagatccagcgagagggtacatg
tactggacagactggggggaaattccgaaaattgaacgggcgggaatggatgggtcaagt
cgatcaataatcgtggacagcgaaatctactggccaaacggactgacgctggactacacc
gagcttaagctttactgggcagatgcaaagtataatttcattcaccgatccagtctggat
ggcagcttgcgggaggtggtagtgaagggctcgctcccacaccccttcgccctcactctc
taccaggacacactcttctggacagattggaacacccactcaatccattcctgcaacaag
aagacaggcgaggaccggcaggaggtccacaccaacatcttctcccccatggacctccat
gtgtatagcgaggaccggcagccgcttgccctgatgaacccatgtacgttgaagaacggc
aactgctcccacctatgcctgctctcacccacaaaacccttttaccagtgtgcctgcccc
actggcgtgcagctactggaagatggtcggacctgtcgggagggtgctactcagctgttg
cttctagcccgacgcacagatttgcgacgcatctctctggatacagctgacttcactgac
attgtgctgaacactgaagacatccggcatgccattgccatcgattacgaccccgtggag
ggccacgtctactggacagatgatgatgtgcgggctatccggcgctcctacttggatggt
agtgggagccagtttttggtcacttcacaggttcatcacccggatggtattgcggtcgac
tgggtggcccgcaacctgtactggacagacacgggcactgaccgcatcgaggtgacccga
cttaatggtaccatgcgcaagatcctcatctctgaagacctggatgagcccagggctatt
gttttggaccctgttgcagggtacatgtactggacggactggggggaggttccgaaaatc
gagcgcgctgccctggatggcactgaccgtgtaatcatggtcaatacctcgctgggttgg
cccaatggtcttgcactggactacggtgagcgaaagctctactggggtgatgccaaaacg
gacaaaattgaggtgataaacatggatggcaccgaacgcaggattctagtggaggataag
ctgccccacatctttggttttaccctgttgggagacttcatctactggacggactggcag
cggagaagcatcgaacgtgtgcacaagcactcagctgaacgtgaaatcattgtggaccag
ctacctgatctcatgggcctcaaagccacctatgtgcaccaggtttttggtacgaacccc
tgtgcggagaacaacgggggctgcagccacctgtgcctgtataaaccccagggagtacag
tgcgcctgtcccattggcctggagctcatcagcgacatgagcacctgcattgtgcctgag
gccttcctgctcttctcccgccacactgatatccgccgcatctccctggagaccaacaac
aacaatgtggcaatcccgctcactggtgtcaaggaggcttctgccctggacttcgacgtc
actgacaaccgcatctattggacggacatcacactaaagacaatcagccgggctttcatg
aatggcagtgctttggaacatgtggtggagtttggtctggactaccccgagggcatggct
gtagactggctggggaagaatctctactgggctgataccggtactaaccgtattgaggtg
gccaagctagacggtcagcaccgccaagtcctggtgtggaaggacctggacagcccacgg
gccttagccctggatccagcggagggatttatgtactggacggaatggggtggcaagcca
aaaattgatcgtgcagccatggatggcacaggacgtaccactctggtagacaatgtgggc
cgtgccaatggtctaaccattgactatgctgcacggaggctgtactggactgacctggat
accacactcatcgaatcctccaacatgcttggcctggagcgagaagtcatagcagatgat
ctcccccaccccttcggcttgacccagtaccaggactacatctactggacagactggagt
cagcgcagcatcgagcgtgccaataagacaagcgggcagaatcgcaccgtcatccagggc
catttagactacgtaatggacatcctggtcttccactcttcacgccaggggggctggaat
gcctgtgcctccacaaatggccactgttcccatctctgtttggctgtgccagtcagtggc
tttgtctgtggctgcccagcccactttaccctgaactctgacaacaagacctgcagcgct
cctacttctttcctgctctttagccagaagactgctatcaaccgcatggtcatagatgaa
cagcagagtcctgacatcgtcttacccattcacagtctccgcaatgtgcgtgccatcgat
tacgacccactccataagcacctttactggatcgatgtaaaacagaatgtcatccgtcgg
gctcaggaggatggaaatcagagcatggcagtggtgagcagtacacctggaatgaattct
ggcctgggcctacaaccctttgacctcagccttgatatatatagccgctacatctactgg
accagcgaggtcaccaatgtcatcaatgttacaacaatggatggccgacgagtgggtgta
gtcctgcgcggggagcaggataagccccgtggcattgtagtcaatccagagagagggtac
atgtacttcaccaaccttcaggagcggtcccccaaaatagagcgtgcagcactggatggc
acagagagggaggtgttattcttcactggcctgggccggcctgtggccctgactctggac
aatgaggccggcaagctgttctgggcagacacagatctgcgccgcatcgagagcagtgac
ctctctggggccaaccggatcgttatcgaggactccaacatcctccagccagtggggctc
acagtctttgggaaccacctatactggattgaccggcagcagcagatgattgagcgcatt
gacaagacaacacgtgaaggccgcactaagatccaggcacgcatatcatcgctgagtgac
atccacgctgtccatgagcttgacatgaaggagtacagcaagcacccctgcacatcggac
aatggtggctgttctcacatctgcattgtgaagggtgatgggaccacacgctgctcctgc
cctgtacacctggtgctgctgcaggatgaactctcctgtggagagcccccaacatgttcc
ccagagcagttctcctgtgcctcaggcgaggtggactgcatcccacatgcctggcgatgc
gatggctatgccgaatgtgatgatggcagtgacgagtatgattgtcctgtatgctccgag
atggagttccagtgtgacagccgccagtgcgtagccctggccctgcgctgcaatggagag
cccaactgccaggatgcctctgatgagagcaagtgctcagtccgttgccctcctgataag
ttcaggtgttcaaatgggcagtgcattggaaggcacaagaagtgtgatcataacatggac
tgctcagacaactctgatgaaatcggctgctacccaactgaagatccaccaccccagcct
gtcagcgtcattgggtccattgtgggcgtgatactggcgctatttgtcgtgggagctgta
tactttgtgtgccagcgtgtgctctgcccgcacatgaaggatgacggtgcgacaatggcc
aacgactttgtcgtacacgggccctcttcagtacctctgggatatgtgccacacccaaat
tccctgtcaggatctttgccaggtatgtctcgaggaaagtctgtgatgagctctctgagc
atcatgggaggcagcagtgggccaccatacgaccgggcccacgtcacgggggcctcctcc
agcagctcctctagcaccaaaggcacatacttcccaccgatgctgaacccaccaccttcc
cctgccacagagcgttcccattacaccatggaatttgggtactcctccaacagcccctca
acccaccgttcttacagctataggccgtatacctatcgacactttgcaccgcccactacg
ccctgcagcacggatgtgtgcgacagcgactacacccccggccgtcgcatcattccagta
gccaagggatatgccagcgacttcaactatgactcggagccgttcccaccaccgcccaca
ccgcgcagccagtacctgtcagctgaggagaactacgagagctgccccccttcgccctac
accgaacgcagctattcccaccacctgtatcctccacctccctctccctgcacagactca
tcctga
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integrated database retrieval system
