Shigella flexneri 2003036: SFy_0524
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Entry
SFy_0524 CDS
T03267
Name
(GenBank) DnaX
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sfn
Shigella flexneri 2003036
Pathway
sfn03030
DNA replication
sfn03430
Mismatch repair
sfn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SFy_0524
03430 Mismatch repair
SFy_0524
03440 Homologous recombination
SFy_0524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfn03032
]
SFy_0524
03400 DNA repair and recombination proteins [BR:
sfn03400
]
SFy_0524
Enzymes [BR:
sfn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SFy_0524
DNA replication proteins [BR:
sfn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SFy_0524
DNA repair and recombination proteins [BR:
sfn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SFy_0524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_4
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_5
AAA_18
ResIII
AAA_2
AAA_16
AAA_14
AAA_7
AAA_assoc_2
PIF1
nSTAND3
TsaE
HrcA
Motif
Other DBs
NCBI-ProteinID:
AIL34359
LinkDB
All DBs
Position
409461..411386
Genome browser
AA seq
641 aa
AA seq
DB search
MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK
GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV
EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM
LGTLDDDQALSLVEAMVEGNGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA
ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH
PRMPLPEPEVPRQSFAPVAPTAVMTPTLVPPQSAPQQAPTVPLPETTSQVLAARQQLQRV
QGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATT
PVMQQKEVVATPKALKKALEHEKTPELAVKLAAEAIERDPWAAQVSQLSLPKLVEQVALN
AWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEW
RQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttttagcccgaaaatggcgcccacaaacctttgctgacgtcgtcggc
caggaacatgtgctgaccgcactggcgaacggcttgtcgttagggcgtattcatcatgct
tatcttttttccggcacccgtggcgtcggaaaaacctctatcgcccgactgctggcgaag
gggctaaactgcgaaaccggcattaccgcgacgccgtgcggcgtgtgcgataactgtcgt
gaaatcgagcaggggcgctttgtcgatctgattgaaatcgacgccgcctcgcgcaccaaa
gttgaagatacccgcgacctgctggataacgtccagtacgctccggcgcgtggtcgtttc
aaagtttatctgatcgacgaagtgcatatgctgtcgcgccacagctttaacgcactgtta
aaaacccttgaagagccgccggagcacgttaagtttctgctggcgacgaccgatccacag
aaattgccggtgacgattttgtcacgctgtctgcaatttcatctcaaggcgctggatgtc
gagcaaattcgccatcagcttgagcacatcctcaatgaagaacatatcgctcacgagccg
cgggcgctgcaattgttggcgcgcgccgctgaaggcagcctgcgagatgccttaagtctg
accgaccaggcgattgccagcggtgacggccaggtttcaacccaggcggtcagtgcgatg
ctgggtacgcttgacgacgatcaggcgctgtcgctggttgaagcgatggtcgagggcaac
ggcgagcgcgtaatggcactgattaatgaagccgctgcccgtggtatcgagtgggaagcg
ttgctggtggaaatgctcggcttgttgcatcgtattgcgatggtacaactttcgcctgct
gcacttggcaacgacatggccgccatcgagctgcggatgcgtgaactggcgcgcaccata
ccgccgacggatattcagctttactatcagacgctgttgattggtcgcaaagaattaccg
tatgcgccggaccgccgcatgggcgttgagatgacgctgctgcgcgcgctggcgttccat
ccgcgtatgccgctgcctgagccagaagtgccacgccagtcctttgcacccgtcgcgcca
acggcagtaatgacgccaaccctggtgccgccgcaatcagcgccgcagcaggcaccgact
gtaccgctcccggaaaccaccagccaggtgctggcggcgcgccagcagttgcagcgcgtg
cagggagcaaccaaagcaaaaaagagtgaaccggcagccgctacccgcgcgcggccggtg
aataacgctgcgctggaaagactggcttcggtcaccgatcgcgttcaggcgcgtccggtg
ccatcggcgctggaaaaagcgccagccaaaaaagaagcgtatcgctggaaggcgaccact
ccggtgatgcagcaaaaagaagtggtcgccacgccgaaggcgctgaaaaaagcgctggaa
catgaaaaaacgccggaactggcggtgaagctagcggcagaagccattgagcgcgacccg
tgggcggcacaggtgagccaactttcgctaccaaaactggtcgaacaggtggcgttaaat
gcctggaaagaggagagcgacaacgcagtatgtctgcatttgcgctcctctcagcggcat
ttgaacaaccgcggtgcacagcaaaaactggctgaagcgttgagcatgttaaaaggttca
acggttgaactgactatcgttgaagatgataatcccgcggtgcgtacgccgctggagtgg
cgtcaggcgatatacgaagaaaaacttgcgcaggcgcgcgagtccattattgcggataat
aatattcagaccctgcgtcggtttttcgatgcggagctggatgaagaaagtatccgcccc
atttga
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