Shigella flexneri 2003036: SFy_3884
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Entry
SFy_3884 CDS
T03267
Name
(GenBank) YgaA
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
sfn
Shigella flexneri 2003036
Brite
KEGG Orthology (KO) [BR:
sfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfn03000
]
SFy_3884
Transcription factors [BR:
sfn03000
]
Prokaryotic type
Helix-turn-helix
Other families
SFy_3884
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
Mg_chelatase
AAA_5
MCM
AAA
GAF_3
AAA_2
AAA_19
AAA_16
AAA_22
HTH_8
AAA_30
DBD_HTH
Motif
Other DBs
NCBI-ProteinID:
AIL36993
LinkDB
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Position
complement(2806347..2807861)
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AA seq
504 aa
AA seq
DB search
MSFSVDVLANIAIELQRGIGHQDRFQRLITTLRQVLECDASALLRYDSRQFIPLAIDGLA
KDVLGRRFALEGHPRLEAIARAGDVVRFPADSELPDPYDGLIPGQESLKVHACVGLPLFV
GQNLIGALTLDGMQPDQFDVFSDEELRLIAALAAGALSNALLIEQLESQNMLPGDATPFE
AVKQTQMIGLSPGMTQLKKEIEIVAASDLNVLISGETGTGKELVAKAIHEASPRAVNPLV
YLNCAALPESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLALQAKLL
RVLQYGDIQRVGDDRSLRVDVRVLAATNRDLREEVLAGRFRADLFHRLSVFPLSVPPLRE
RGDDVILLAGYFCEQCRLRQGLSRVVLSAGARNLLQHYSFPGNVRELEHAIHRAVVLARA
TRNGDEVILEAQHFAFPEVTLPPPEAAAVPVVKQNLREATEAFQRETIRQALAQNHHNWA
ACARMLETDVANLHRLAKRLGLKD
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgagtttttccgttgatgtgctggcgaatatcgccatcgaattgcagcgtgggattggt
catcaggatcgttttcagcgcctgatcaccacgctacgtcaggtgctggagtgcgatgcg
tctgcgttgctacgttacgattcgcggcagtttattccgcttgccatcgacggtctggca
aaggatgtactcggtagacgctttgcgctggaagggcatccacggctggaagcgattgcc
cgcgccggggatgtggtgcgctttcccgcagacagcgaattgcccgatccctatgacggt
ttgattcctgggcaggagagtctgaaggttcacgcctgcgttggtctgccattgtttgtc
ggacaaaacctgatcggcgcactgacgctcgacgggatgcagcccgatcagttcgatgtt
ttcagcgacgaagagttacggctgattgccgcgctggcggcgggagcgttaagcaatgcg
ttgctgattgaacaactggaaagccagaatatgctgccaggcgatgccacgccgtttgaa
gcggtgaaacagacgcagatgattggcttgtcccctggcatgacgcaactgaaaaaagag
attgagattgtggcggcgtccgatctcaacgttctgatcagcggtgagacgggaaccggt
aaggagctggtggcgaaagcgattcatgaagcctcgccacgggcggtgaatccgctggtc
tatctcaactgtgccgcactgccggaaagtgtggcggaaagtgagttgttcgggcatgtg
aaaggagcgtttactggcgctatcagtaaccgcagcgggaagtttgaaatggcggataac
ggtactctgtttctcgatgagatcggcgagttgtcgttggcattgcaggccaagctgctg
agggtgttgcagtatggcgatattcagcgcgttggcgatgaccgtagtttgcgggtcgat
gtgcgcgtgctggcggcgactaaccgcgacttacgcgaagaggtgctggcagggcgattc
cgcgccgatttgtttcatcgcctgagcgtgtttccactttcggtgccgccgctgcgtgag
cggggcgatgatgtcattctgctggcggggtatttctgcgagcagtgtcgtttgcggcag
gggctctcccgcgtggtattaagtgccggggcgcgaaatttactgcaacactacagtttt
ccgggaaacgtgcgcgaactggaacatgctattcatcgggcggtagtgctggcgagagcc
acccgcaacggcgatgaagtgattcttgaggcgcaacattttgcttttcctgaggtgacg
ttgccgccgccagaagcggcggcggtgcccgttgttaagcaaaacctgcgtgaagcgaca
gaagcgttccagcgtgaaactattcgccaggcactggcacaaaatcatcacaactgggca
gcctgtgcgcgaatgctggaaactgacgtcgccaacctgcatcggctggcgaaacgtctg
ggattgaaggattaa
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