KEGG   Shigella flexneri 2003036: SFy_4057
Entry
SFy_4057          CDS       T03267                                 
Name
(GenBank) LysA
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
sfn  Shigella flexneri 2003036
Pathway
sfn00300  Lysine biosynthesis
sfn00470  D-Amino acid metabolism
sfn01100  Metabolic pathways
sfn01110  Biosynthesis of secondary metabolites
sfn01120  Microbial metabolism in diverse environments
sfn01230  Biosynthesis of amino acids
Module
sfn_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:sfn00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    SFy_4057
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    SFy_4057
Enzymes [BR:sfn01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     SFy_4057
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC
Other DBs
NCBI-ProteinID: AIL37121
LinkDB
Position
complement(2939883..2941145)
AA seq 420 aa
MPHSLFSTDTDLTAENLLRLPAEFGCPVWVYDAQIIRRQIAALKQFEVVRFAQKACSNIH
ILRLMREQGVKVDSVSLGEIERALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVN
AGSVDTLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR
HHLQLVGIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSIPYQQGEEAVD
TEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDA
GFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRA
LPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLALELL
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgccacattcactgttcagcaccgataccgatctcaccgccgaaaatctgctgcgtttg
cccgctgaatttggctgcccggtgtgggtctacgatgcgcaaattattcgtcggcagatt
gcagcgctgaaacagtttgaagtggtgcgctttgcacagaaagcctgttccaatattcat
attttgcgcttaatgcgtgagcagggcgtgaaagtggattccgtctcgttaggcgaaata
gagcgtgcgttggcggcgggttacaatccgcaaacgcaccccgatgatattgtttttacg
gcagatgttatcgatcaggcgacgcttgaacgcgtcagtgaattgcaaattccggtgaat
gcgggttctgttgatacgctcgaccaactgggccaggtttcgccagggcatcgggtatgg
ctgcgcgttaatccggggtttggtcacggacatagccaaaaaaccaataccggtggcgaa
aacagcaagcacggtatctggtacaccgatctgcccgccgcactggacgtgatacaacgt
catcatctgcagctagtcggcattcacatgcacattggttctggcgttgattatgcccat
ctggagcaggtgtgtggtgctatggtgcgtcaggttatcgaattcggtcaggatttacag
gctatttctgcgggcggtgggctttctattccttatcaacagggtgaagaggcggttgat
accgaacattattatggtctgtggaatgccgcgcgtgagcaaatcgctcgccatttgggc
caccctgtgaaactggaaattgaaccgggtcgcttcctggtagcgcagtctggcgtatta
attactcaggtgcggagcgtcaaacaaatgggtagccgccactttgtgctggttgatgcc
gggttcaacgatctgatgcgcccggcaatgtacggtagttaccaccatatcagtgccctg
gcagctgatggtcgttctctggaacacgcgccaacggtggaaaccgtcgtcgccgggccg
ttatgtgaatcgggcgatgtctttacccagcaggaagggggaaatgttgaaacccgcgcc
ttgccggaagtgaaggcaggtgattatctggtactgcatgatacaggggcatatggcgca
tcaatgtcatccaactacaatagccgtccgctgttaccagaagttctgtttgataatggt
caggcgcggttgattcgccgtcgccagaccatcgaagaattactggcgctggaattgctt
taa

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