Shigella flexneri 2003036: SFy_4057
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Entry
SFy_4057 CDS
T03267
Name
(GenBank) LysA
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sfn
Shigella flexneri 2003036
Pathway
sfn00300
Lysine biosynthesis
sfn00470
D-Amino acid metabolism
sfn01100
Metabolic pathways
sfn01110
Biosynthesis of secondary metabolites
sfn01120
Microbial metabolism in diverse environments
sfn01230
Biosynthesis of amino acids
Module
sfn_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sfn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SFy_4057
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SFy_4057
Enzymes [BR:
sfn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
SFy_4057
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AIL37121
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Position
complement(2939883..2941145)
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AA seq
420 aa
AA seq
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MPHSLFSTDTDLTAENLLRLPAEFGCPVWVYDAQIIRRQIAALKQFEVVRFAQKACSNIH
ILRLMREQGVKVDSVSLGEIERALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVN
AGSVDTLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR
HHLQLVGIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSIPYQQGEEAVD
TEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDA
GFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRA
LPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLALELL
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgccacattcactgttcagcaccgataccgatctcaccgccgaaaatctgctgcgtttg
cccgctgaatttggctgcccggtgtgggtctacgatgcgcaaattattcgtcggcagatt
gcagcgctgaaacagtttgaagtggtgcgctttgcacagaaagcctgttccaatattcat
attttgcgcttaatgcgtgagcagggcgtgaaagtggattccgtctcgttaggcgaaata
gagcgtgcgttggcggcgggttacaatccgcaaacgcaccccgatgatattgtttttacg
gcagatgttatcgatcaggcgacgcttgaacgcgtcagtgaattgcaaattccggtgaat
gcgggttctgttgatacgctcgaccaactgggccaggtttcgccagggcatcgggtatgg
ctgcgcgttaatccggggtttggtcacggacatagccaaaaaaccaataccggtggcgaa
aacagcaagcacggtatctggtacaccgatctgcccgccgcactggacgtgatacaacgt
catcatctgcagctagtcggcattcacatgcacattggttctggcgttgattatgcccat
ctggagcaggtgtgtggtgctatggtgcgtcaggttatcgaattcggtcaggatttacag
gctatttctgcgggcggtgggctttctattccttatcaacagggtgaagaggcggttgat
accgaacattattatggtctgtggaatgccgcgcgtgagcaaatcgctcgccatttgggc
caccctgtgaaactggaaattgaaccgggtcgcttcctggtagcgcagtctggcgtatta
attactcaggtgcggagcgtcaaacaaatgggtagccgccactttgtgctggttgatgcc
gggttcaacgatctgatgcgcccggcaatgtacggtagttaccaccatatcagtgccctg
gcagctgatggtcgttctctggaacacgcgccaacggtggaaaccgtcgtcgccgggccg
ttatgtgaatcgggcgatgtctttacccagcaggaagggggaaatgttgaaacccgcgcc
ttgccggaagtgaaggcaggtgattatctggtactgcatgatacaggggcatatggcgca
tcaatgtcatccaactacaatagccgtccgctgttaccagaagttctgtttgataatggt
caggcgcggttgattcgccgtcgccagaccatcgaagaattactggcgctggaattgctt
taa
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