Shigella flexneri 2003036: SFy_4173
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Entry
SFy_4173 CDS
T03267
Name
(GenBank) SpeA
KO
K01585
arginine decarboxylase [EC:
4.1.1.19
]
Organism
sfn
Shigella flexneri 2003036
Pathway
sfn00330
Arginine and proline metabolism
sfn01100
Metabolic pathways
sfn01110
Biosynthesis of secondary metabolites
Module
sfn_M00133
Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine
Brite
KEGG Orthology (KO) [BR:
sfn00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
SFy_4173
Enzymes [BR:
sfn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
SFy_4173
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Arg_decarb_HB
Arg_decarbox_C
Motif
Other DBs
NCBI-ProteinID:
AIL37206
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Position
complement(3024107..3025999)
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AA seq
630 aa
AA seq
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MSSQEASKMLRTYNIAWWGNNYYDVNELGHISVCPDPDVPEARVDLAQLVKTREAQGQRL
PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG
LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV
LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL
QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC
SVNYGLNEYANNIIWAIGDACEENGLPHPTVITESGRAVTAHHTVLVSNIIGVERNEYTV
PTAPVEDAPRALQSMWETWQEMHEPGTRRSLREWLHDSQMDLHDIHIGYSSGTFSLQERA
WAEQLYLSMCHEVQKQLDPQNRAHRPIIDELQERMADKMYVNFSLFQSMPDAWGIDQLFP
VLPLEGLDQVPERRAVLLDITCDSDGAIDHYIDGDGIATTMPMPEYDPENPPMLGFFMVG
AYQEILGNMHNLFGDTEAVDVFVFPDGSVEVELSDEGDTVADMLQYVQLDPKTLLTQFRD
QVKKTDLDAELQQQFLEEFEAGLYGYTYLG
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccaggaagccagcaagatgctgcgtacttacaatattgcctggtggggcaat
aactactatgacgttaacgagctgggccacatcagcgtgtgcccggacccggacgtcccg
gaagctcgcgtcgatctcgcgcagttagtgaaaactcgtgaagcacagggtcagcgtctg
cctgcactgttctgtttcccacagatcctgcagcaccgtttgcgttccattaacgccgcg
ttcaaacgtgcgagggaatcctacggctataacggcgattacttccttgtttatccgatc
aaagttaaccagcaccgccgcgtgatcgagtccctgattcattcgggtgaaccgctgggt
ctggaagccggttccaaagccgagttgatggcagtgctggcacatgctggcatgactcgt
agcgtcatcgtctgcaacggttataaagaccgcgaatatatccgcctggcattaattggc
gagaagatggggcacaaggtctatctggtcattgagaagatgtcagaaatcgccattgtg
ctggatgaagcagaacgtctgaatgtcgttcctcgtctgggcgtgcgtgcacgtctggct
tcgcagggctcgggtaaatggcagtcctccggcggggaaaaatcgaagttcggcctggct
gcgactcaggtactgcaactggttgaaaccctgcgtgaagccgggcgtctcgacagcctg
caactactgcacttccacctcggttcgcagatggcgaatattcgcgatatcgcgacaggc
gttcgtgaatccgcgcgtttctatgtggaactgcacaagctgggcgtcaatattcagtgc
ttcgacgtcggcggcggtctgggcgtggattatgaaggcacccgttcgcagtctgactgc
tccgtaaactatggcctcaatgaatacgccaacaacatcatctgggcgattggcgatgcg
tgtgaagaaaatggtctgccgcatccgacggtaatcaccgaatcgggccgtgcggtgact
gcgcaccataccgtgctggtgtcgaatatcatcggcgtggaacgtaacgaatatacggtg
ccgaccgcgcccgtagaagatgcgccgcgtgcgctgcaaagcatgtgggaaacctggcag
gaaatgcacgaaccgggaactcgccgttctttgcgtgaatggttacacgacagccagatg
gatctgcacgacattcatatcggctactcttccggcacctttagcctgcaagaacgtgca
tgggcagaacaactctatctgagcatgtgccatgaagtgcagaagcaactggatccgcaa
aaccgtgcgcatcgtccgataatcgacgaactgcaggaacgtatggcggacaaaatgtac
gtcaatttctcgctgttccagtcaatgccggacgcatgggggatcgaccagttgttcccg
gttctaccgctggaagggctggatcaagtgccggaacgtcgcgctgtgctgctggatatt
acctgtgactctgacggtgctatcgaccactatattgatggtgatggtattgccacgaca
atgccaatgccggagtacgatccagagaatccgccgatgctcggtttctttatggtcggt
gcatatcaggagatccttggcaatatgcacaacctgttcggtgataccgaagcagttgac
gtgttcgtgttccctgacggtagcgtagaagtagaactgtctgacgaaggcgataccgtg
gcggacatgctgcaatatgtacagctcgatccgaaaacgctgttaacccagttccgcgat
caagtgaagaaaaccgatcttgatgctgaactgcaacaacagttccttgaagagttcgag
gcaggtttgtacggttatacttatcttgggtaa
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