Shigella flexneri 2003036: SFy_5171
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Entry
SFy_5171 CDS
T03267
Name
(GenBank) selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
sfn
Shigella flexneri 2003036
Brite
KEGG Orthology (KO) [BR:
sfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sfn03012
]
SFy_5171
Translation factors [BR:
sfn03012
]
Eukaryotic type
Elongation factors
SFy_5171
Prokaryotic type
SFy_5171
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_SelB
GTP_EFTU
WHD_2nd_SelB_bact
WHD_1st_3rd_SelB
WHD_3rd_SelB
WHD_2nd_SelB
GTP_EFTU_D2
MMR_HSR1
RsgA_GTPase
GTP_EFTU_D4
HrcA
SRPRB
Motif
Other DBs
NCBI-ProteinID:
AIL37957
LinkDB
All DBs
Position
complement(3728111..3729955)
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AA seq
614 aa
AA seq
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MIIATAGHVDHGKTTLLQAITGVNADRLPEEKKRGMTIDLGYAYWPQPDGRVPGFIDVPG
HEKFLSNMLAGVGGIDHALLVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEA
RVDEVERQVKEVLREYGFAEAKLFITAATEGRGIDALREHLLQLPEREHASQHSFRLAID
RAFTVKGAGLVVTGTALSGEVKVGDSLWLTGVNKPMRVRALHAQNQPTETANAGQRIALD
IAGDAEKEQINRGDWLLADVPPEPFTRVIVELQTHAPLTQWQPLHIHHAASHVTGRVSLL
EDNLAELVFDTPLWLADNDRLVLRDISARNTLAGARVVMLNPPRRGKRKPEYLQWLASLA
RAQNDSEALAVHLQRGAVNLPDFAWARQLNGEGMRELLQQPGYIQAGYSLLNAPVAARWQ
RKILDTLATYHEQHRDEPGPGRERLRRMALPMEDEALVLLLIEKMRESGDILSHHGWLHL
PDHKAGFSEEQQAIWQKAEPLFGDEPWWVRDLAKETGTDEQAMRLTLRQAAQQGIITAIV
KDRYYRNDRIVEFANMIRDLDQECGSTCAADFRDRLGVGRKLAIQILEYFDRIGFTRRRG
NDHLLRDALLFPEK
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgattattgcgactgccggacacgttgaccacggcaaaacaaccttattgcaggcgatt
actggcgtaaatgctgaccgtctgccggaagaaaaaaagcgcggcatgaccatcgatctc
ggctatgcctactggccgcagccggatggtcgcgtgcctggttttatcgacgttcccggt
catgaaaagtttctttccaacatgctggcgggcgttggtggtatcgatcacgcgctgttg
gtggtggcgtgcgatgacggcgtgatggcacagacccgtgagcatctggcgattttgcag
ctgaccggtaacccgatgctgacagtggcgctgaccaaagccgatcgcgtggacgaagcg
cgtgttgatgaggttgaacgccaggtaaaggaggttctgcgggaatacggttttgctgag
gcaaaactgtttatcaccgcagcaaccgaaggtcggggaattgatgccctgcgcgagcat
ctgcttcagttgccggaacgcgagcacgccagccaacatagtttccgcctcgcgattgac
cgcgcatttaccgtaaaaggtgccgggctggtcgtcaccggtacggcgttaagcggggaa
gtgaaggtaggcgattcactctggctgactggtgtaaataaaccgatgcgtgtacgtgcg
ctgcatgcgcaaaaccagccaacagaaaccgccaatgccgggcagcgtatcgcgcttgac
atcgcgggtgatgcggaaaaagagcagattaaccgtggcgactggctgcttgccgatgtg
ccgccagagccgttcacacgggtgattgtcgagcttcaaacccatgcaccgctgacccag
tggcagccgctgcatattcaccacgccgccagccacgtcacgggacgcgtttcactgctg
gaagataaccttgctgaactggtcttcgacaccccgttatggctggcagataacgaccgc
ctggtattgcgcgatatctctgcccgcaacacgctggccggagcgcgcgtcgtgatgctt
aacccgccgcgtcgcggtaaacgtaaaccagagtatctgcaatggctggcttccctcgcc
agggcacagaatgatagcgaagcgttagccgttcacctgcaacgcggcgcggttaatctt
cctgatttcgcttgggcgcgccagctcaacggcgaagggatgcgcgaactgctgcaacag
cctggctatattcaggctggttatagcttgttgaatgcgccggttgccgctcgctggcaa
cggaaaattctcgacacattagcgacttatcatgagcaacatcgcgatgaacctgggcct
gggcgcgaacgtctgcgacgtatggcgttgccaatggaagatgaagcgctagtactgttg
ctgattgaaaagatgcgcgaaagcggcgacatcctcagtcatcacggttggctgcatctg
ccggatcacaaagcgggcttcagcgaagagcagcaggccatctggcaaaaagcagagccg
ctgtttggtgacgagccgtggtgggtgcgtgatctggcaaaagagacgggtaccgacgag
caggcaatgcgcctgacgctacgccaggcggcgcagcaaggaataattaccgcgatcgtc
aaagatcgttattaccgtaacgatcggattgtcgaatttgccaatatgatccgcgatctc
gatcaggagtgtggttcaacctgcgcggcggatttccgcgatcgcttaggcgtaggccga
aagctggcaattcagattctggaatattttgaccgcattggctttacgcgtcgtcgtgga
aatgatcatttattgcgcgacgcattattatttccggaaaaataa
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