Shigella flexneri 2003036: SFy_5236
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Entry
SFy_5236 CDS
T03267
Name
(GenBank) 3-deoxy-D-manno-octulosonic-acid transferase family protein
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
sfn
Shigella flexneri 2003036
Pathway
sfn00540
Lipopolysaccharide biosynthesis
sfn01100
Metabolic pathways
Module
sfn_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
sfn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SFy_5236
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sfn01005
]
SFy_5236
Enzymes [BR:
sfn01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
SFy_5236
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
SFy_5236
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
SFy_5236
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
SFy_5236
Lipopolysaccharide biosynthesis proteins [BR:
sfn01005
]
Lipid A
SFy_5236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
Glyco_trans_4_4
Glyco_trans_1_4
PCC_BT
Motif
Other DBs
NCBI-ProteinID:
AIL38007
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Position
3774666..3775877
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AA seq
403 aa
AA seq
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MRGRKAPAYRKRWGERYGFYRHPLKPGGIMLHSVSVGETLAAIPLVRALRHRYPDLPITV
TTMTPTGSERVQSAFGKDVQHVYLPYDLPDALNRFLNKVDPKLVLIMETELWPNLIAALH
KRKIPLVIANARLSARSAAGYAKLGKFVRRLLRRITLIAAQNEEDGARFVALGAKNNQVT
VTGSLKFDISVTPQLAAKAVTLRRQWAPHRPVWIATSTHEGEESVVIAAHQALLQQFPNL
LLILVPRHPERFPDAINLVRQAGLSYITRSSGEVPSTSTQVVVGDTMGELMLLYGIADLA
FVGGSLVERGGHNPLEAAAHAIPVLMGPHTFNFKDICARLEQASGLITVTDATTLAKEVS
SLLTDAVYRSFYGRHAVEVLYQNQGALQRLLQLLEPYLPPKTH
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcggacgtaaggctccggcctatcgaaaacgctggggtgaacgttacggtttttac
cgccatccgctaaaaccaggcggcattatgctgcactccgtctccgtcggtgaaactctg
gcggcgatcccgttggtgcgcgcgctgcgtcatcgttatcctgatttaccgattaccgtt
acaaccatgacgccaaccggttcggagcgcgtacaatcggctttcgggaaggatgttcag
cacgtttatctgccgtatgacctgcccgatgcgctcaaccgtttcctgaataaagtcgac
cccaaactggtgttgattatggaaaccgaactatggcctaacctgattgcggcgctacat
aaacgtaaaattccgctggtgatcgctaacgcgcgactctctgcccgctcggccgcaggt
tatgccaaactgggtaaattcgtccgccgcttgctgcgtcgtattacgctgattgctgcg
caaaatgaagaagatggtgcacgttttgtggcgctgggcgcaaaaaataaccaggtaacc
gttaccggtagcctgaaattcgatatttctgtaactccgcagttggctgctaaagccgtg
acgctacgccgccaatgggcaccacaccgcccggtatggattgccaccagcactcacgaa
ggtgaagagagcgtggtcattgccgcacatcaggcattgttacagcaattcccgaattta
ttgctcatcctggtaccccgtcatccagaacgcttcccggatgcgattaaccttgtccgc
caggctggactaagctatatcacacgctcttcaggggaagtcccctccaccagcacgcag
gttgtggttggcgatacgatgggcgagttgatgttactgtacggcattgccgatctcgcc
tttgttggcggttcactggttgaacgtggtgggcataatccgctggaagctgccgcacac
gctattccggtattgatggggccgcatacttttaactttaaagacatttgcgcgcggctg
gagcaggcaagcgggcttattaccgttaccgatgccactacgcttgcaaaagaggtttcc
tctttactcaccgacgccgtttaccgtagtttctatggccgtcatgccgttgaagtactg
tatcaaaaccagggcgcgctacagcgtctgcttcaactgctggaaccttacctgccaccg
aaaacgcattga
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