Chania multitudinisentens: Z042_00140
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Entry
Z042_00140 CDS
T02987
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
sfo
Chania multitudinisentens
Brite
KEGG Orthology (KO) [BR:
sfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfo03016
]
Z042_00140
Enzymes [BR:
sfo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Z042_00140
Transfer RNA biogenesis [BR:
sfo03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Z042_00140
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
Motif
Other DBs
NCBI-ProteinID:
AHG18232
UniProt:
W0L7K6
LinkDB
All DBs
Position
complement(3543355..3545289)
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRVEGVVKGTEKGFGFLEVDGQKSYFIPPPYMKKVMHGDRI
VATLHTEKEREIAEPETLVEPFLSRFVGRVQKRDDRLSIIPDHPLLKEVIQCRPVRELTH
HFQEGDWAVAEMRRHPLKGDRSFYADLTQFITNGEDHLAPWWVTLARHHLEKEAPEMLTL
GEPDTSLPREDLTALDFVTIDSASTEDMDDALHVQDNGNGTWQLTIAIADPTAYIAENSH
LDEIARKRAFTNYLPGFNIPMLPRDLSDNLCSLLPNQRRSVLACRVTIAADGALGQDIHF
FVAEIESKAKLVYDQVSDWLEGIAGWQPPNEAITQQIALLKQVCDARHAWRHQHALVFKD
RPDYRFVLGAKGEVLEIVTEQRRIANRIVEECMIAANVCAALVLRDRLGFGIYNVHTGFD
PALVEQAVAVLRANEVEAEAEKLLTLDGFCELRRHLDAQPTPFLDSRIRRFQTFAEITTL
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAIINEQPANKPQDEVTVQLVERRRLNRM
AERDVGDWLYARFLQDKAGTNEHFTAEIIDVTRGGLRVRLLENGAVAFVPAPFIHAVRDE
LVCSQEAGTVQIKGEVVYRQSDTLQVNIAEVRMETRSVIAKPSA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagataacccgctgctggcgcagcttaaacagcaacttcactctcagactccg
cgtgttgaaggcgtagtaaaagggactgagaaaggcttcggctttttggaagtcgacggt
caaaagagttatttcatcccgccgccgtacatgaaaaaagtcatgcatggagatcgtatc
gtcgccactctgcataccgaaaaagagcgcgaaatcgctgaaccagaaaccctggttgag
ccatttttatcgcgatttgttggccgggtgcagaaaagagacgatcgcctgtctatcata
cctgaccatcccttgctgaaagaggtgattcagtgccgcccggtgcgtgaattaactcat
catttccaagagggtgattgggctgtggcagaaatgcgccgccatcctctgaagggggat
cgcagtttttatgccgatctgacgcagtttattaccaacggcgaagaccatttagcgcct
tggtgggtaacgttggcacgccatcatctggaaaaagaagcaccagagatgcttaccctc
ggcgaacctgatacctctttgccacgggaagatctgaccgcgctggatttcgtcaccatc
gacagtgccagcaccgaagatatggacgatgcgttgcacgtacaggataacggcaacggt
acatggcagttaaccatcgccattgccgatcctactgcttatattgcagaaaacagccat
ctggatgagatcgcccgcaagcgcgcattcaccaattatctgccggggttcaacattccg
atgttgccacgcgatctgtccgataacctgtgttcattgctgcctaaccaacgccgctcc
gtgttggcttgccgtgtgaccatcgccgcagacggtgctttgggccaggatatccacttt
tttgtcgccgaaatcgagtccaaagccaagctggtttatgaccaagtttctgactggctg
gaaggcatcgcaggttggcaacctcccaatgaagccatcactcagcagatcgccttactg
aaacaggtttgtgatgcccgccacgcctggcgccaccagcacgcgctggtattcaaagat
cgccctgattaccgttttgtactcggtgcaaaaggtgaagtgctggagatcgtcaccgaa
caacgccgtatcgccaaccgcatcgttgaagagtgcatgattgctgctaacgtctgcgcc
gccctggtgctgcgcgatcgccttggttttggcatttacaacgttcataccgggtttgat
ccggcgctggttgaacaggctgtcgccgtattgcgggccaacgaggttgaggccgaagca
gaaaaactgctgacgctggatggattttgtgaactgcgccgccatctcgacgcacagcca
acaccgttcttggatagccgtattcgccgtttccagacctttgcagaaatcactaccctg
ccaggcccgcatttcggcctgggattggaagcctatgcaacctggacctctcccatccgt
aagtatggcgatatgatcaaccatcgcctgctgaaagccatcatcaacgaacaacctgcc
aataagccgcaggacgaagtgacagtgcaactggttgagcgccgccgcctgaatcgcatg
gccgaacgcgacgttggcgactggctgtatgcgcgcttcctgcaagacaaagccggaacc
aatgagcatttcacggcagaaatcattgatgtaacgcgtggtggcctgcgcgtgcgcctg
ctggaaaacggcgcggtcgctttcgttccggcaccgtttattcatgcggtgcgtgatgag
ctggtctgtagccaggaggctggcacggtacagatcaaaggtgaagtggtttatcgccag
agtgataccttgcaggtcaacattgccgaagtgcgtatggaaacccgcagcgtgattgcc
aaaccgagcgcctga
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