Chania multitudinisentens: Z042_00235
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Entry
Z042_00235 CDS
T02987
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sfo
Chania multitudinisentens
Brite
KEGG Orthology (KO) [BR:
sfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfo03032
]
Z042_00235
03400 DNA repair and recombination proteins [BR:
sfo03400
]
Z042_00235
Enzymes [BR:
sfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Z042_00235
DNA replication proteins [BR:
sfo03032
]
Prokaryotic type
DNA Topoisomerases
Z042_00235
DNA repair and recombination proteins [BR:
sfo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Z042_00235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AHG18250
UniProt:
W0L8B6
LinkDB
All DBs
Position
3520792..3523389
Genome browser
AA seq
865 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSTSKKSADSTDDKTKKKVK
KDEKTALVNRMGVDPYHGWKAHYEILPGKEKVVAELKSLAENADHIYLATDLDREGEAIA
WHLREVIGGDDKRFSRVVFNEITQNAIQQAFKAPGELNIDRVNAQQARRFMDRVVGYMVS
PLLWKKIARGLSAGRVQSVAVRLVVERERDIKAFVPEEYWELHADLLAKNEVALQMEVTH
AHDKPFKPVNREQTHAAVKLLEKARYTVLDREDKPTSSKPSAPFITSTLQQAASTRLSFG
VKKTMMMAQRLYEAGHITYMRTDSTNLSQDALNMVRGYIGGNFGDKYLPKAANQYSSKEN
SQEAHEAIRPSDVNVLAEQLKDMEADAQKLYQLIWRQFVACQMTPAQYDSTTLIVKAGDF
QLRAKGRTLRFDGWTKVMPALRKGDEDRTLPFVEVGSELDLQKLIPSQHFTKPPARYSEA
SLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFRELMNY
DFTARMEDGLDQVANNHAEWKAVLDEFFAEFSKQLETAEKDPEAGGMRPNQMVMTSIDCP
TCNRQMGIRTASTGVFLGCSGYALAPKERCKTTINLVPEAEVLNILEGDEAETNALRARR
RCQKCGTAMDSYLIDNQRKLHVCGNNPACDGYEIEEGEFRLKGYDGPIVECEKCGSEMHL
KMGRFGKYMGCTNESCKNTRKILRNGDVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVF
LAANTFPKSRETRAPLVEELQRFQDRLPEKLRYLADAPAVDADGNKTMVRFSRKTKQQYV
SSEKDGKATGWSAFYIDGKWVEGKK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctctcgtaatagttgagtccccggcaaaagccaaaactattaataagtat
ttaggaaatgactacgtggtgaagtctagcgtgggtcatatccgtgatttgccgaccagt
ggctcaaccagcaaaaagagcgctgattcaaccgatgacaaaaccaaaaagaaagttaag
aaagatgaaaaaacggcgctggtaaaccgcatgggcgtcgatccttatcatggctggaaa
gcgcattacgagattctgccaggcaaagagaaagtggtcgctgagttaaagtcgttagcg
gaaaatgccgaccatatctacctcgcaacggaccttgaccgcgaaggggaagccattgcc
tggcacctgcgggaagtgatcggtggggatgacaaacgtttcagccgcgtggtgtttaac
gaaatcacccaaaacgccatccaacaggcgttcaaagcgccaggtgaattgaatatagac
cgtgtgaatgcccagcaagcgcgccgctttatggatcgcgtcgtgggttatatggtttca
cccctgctgtggaaaaagattgctcgcgggttatctgctgggcgggtgcaatcggtcgcg
gtacgcttggtggtggagcgtgagcgcgatatcaaagcattcgtgccggaagaatactgg
gagttacatgccgatctgctagccaagaatgaagtcgcgttgcagatggaagtgactcat
gctcacgataaacccttcaagccggttaaccgtgaacaaacccatgcagcggtcaaactg
ctggaaaaagcccgttatacggtgctggatcgcgaagacaaaccgaccagcagcaagccg
agtgcgcctttcattacttctacactgcaacaagcagccagcactcgcctgagttttggc
gtgaagaaaaccatgatgatggcgcagcgtctgtatgaagccggccacattacctatatg
cgtaccgactccaccaacctgagccaggacgcgctcaacatggtgcgtggttacatcggg
ggtaatttcggtgataaatatttgccgaaagccgccaaccagtacagcagcaaagaaaat
tcacaagaggctcatgaagccattcggccttccgatgttaacgtgttggccgaacagcta
aaagacatggaagcggatgcacaaaaactgtatcagctgatctggcgccagtttgttgcc
tgccagatgacgccagcacagtacgactccaccacgttgatagtgaaagcgggtgatttc
caactgcgtgccaaaggccgtacgttgcgttttgatggctggaccaaagtgatgcccgcg
ctgcgcaagggtgatgaagatcgtactctgccgtttgttgaagtgggcagtgagctggat
ctgcaaaaactgatcccaagccagcactttaccaaaccaccggcgcgttacagtgaagca
tcgctggtgaaagaattggaaaaacgtggcatcggccgcccatccacctatgcatcgatc
atctcgaccattcaggatcgtggttatgttcgggtagaaaaccgccgtttctatgcagaa
aaaatgggtgagatcgtcaccgatcgcttggaagaaaacttccgcgaattgatgaactat
gatttcacggcgcggatggaagatggcctggatcaggtcgctaacaaccacgcagaatgg
aaagcggtgcttgacgaattctttgctgaatttagcaaacagctggagacggcagagaaa
gatcctgaagccggcgggatgcgtccgaaccagatggtgatgaccagcattgattgccca
acctgtaaccgccagatgggtatccgtactgccagtaccggcgttttcctcggttgttcc
ggctatgcactggcacctaaagaacgctgcaaaaccaccattaatctggtaccggaagcg
gaagtgctgaacatccttgaaggggatgaagctgaaacgaatgctctacgagcccgccgc
cgctgccagaaatgcggcactgcgatggacagctatctgatcgacaaccagcgcaagctg
cacgtttgtggcaataacccagcctgtgacggttatgagatcgaagaaggtgaattccgc
ctgaaaggctacgatggcccgatcgttgagtgtgaaaagtgtggttctgaaatgcacctg
aaaatggggcgtttcggtaagtacatggggtgtaccaacgaaagctgtaagaacactcgt
aaaatcctgcgcaatggtgatgttgcaccaccgaaggaagatccggttccgttgccagag
ttgccgtgtgaaaagtcggacgcctactttgtactgcgtgatggtgctgcgggggtattc
ctggctgccaataccttcccgaaatcgcgtgaaacccgggcgccgttggtggaagaacta
cagcgcttccaagatcgtttgccggaaaaactgcgctatctggccgatgcgcctgccgtt
gatgcggatgggaataagacgatggtgcgttttagccgcaaaaccaagcagcagtacgtt
tcctcagagaaagacggtaaagccaccggctggtctgctttttatattgatggcaaatgg
gttgaaggcaaaaaataa
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