KEGG   Chania multitudinisentens: Z042_02200
Entry
Z042_02200        CDS       T02987                                 
Symbol
helD
Name
(GenBank) DNA helicase IV
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
sfo  Chania multitudinisentens
Brite
KEGG Orthology (KO) [BR:sfo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sfo03400]
    Z042_02200 (helD)
Enzymes [BR:sfo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Z042_02200 (helD)
DNA repair and recombination proteins [BR:sfo03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Z042_02200 (helD)
SSDB
Motif
Pfam: Helicase_IV_N UvrD-helicase AAA_19 UvrD_C UvrD_C_2 AAA_30 AAA_12 DEAD ResIII
Other DBs
NCBI-ProteinID: AHG18566
UniProt: W0L4D6
LinkDB
Position
3105011..3107065
AA seq 684 aa
MELKATSLGKHLAQHPYNRVRLLHAGVKVSGEKHEYLIPFNQLIQVRCKRGIVWGELEFE
LPDEKVVRLHGTEWQETQRFYHYLLQSWQQWSAEMSEVSAGVLQEQVAHIRVIEGQDKWF
KRSDLSQLQQQIHQAFGALPLPVARLNEFEHCREDYHLCLQWLQHGQRSVAQRNQQWVER
MLESYHDFFQNIEASPLNTSQSRAVVNGEETVLVLAGAGSGKTSVLVARAGWLLRRQEAE
PGQILLLAFGRNAAAEMNERIQERLGKVAIQAKTFHALALQVIQEGGRKEPVISQLETDS
KARRALLINHWQQQCSEKKAQAKGWRQWLSEELEWEVPDGDFWHNKHLAERLAGRLERWL
GLMRTYGGSQAAMIELADEEVRDLFAKRVRLMAPLLKAWKAALKEEGAVDFAGLIHQAVN
LLDKGRFISPWKHILVDEFQDISPQRAQLLAALRRQNKQSCLFAVGDDWQAIYRFSGAEL
ALTTAFAANFGEGAQCALDTTYRFNDRIGEVANSFIQQNPHQLKKPLNSLTKGHKKSVVI
LPQEQLEALLDKISGYAQPEERILVLARYHHLKPSALSKAATRWPKLNIEFMTIHASKGQ
QADYVIIAGLHDGNDGFPAIARESVLEDVLLPPPEDFPDAEERRLLYVALTRAKHQVWLL
QDRESPSIFVEQLQDLGVPSQKKP
NT seq 2055 nt   +upstreamnt  +downstreamnt
atggaacttaaagcgacatccctgggtaaacacctggcgcagcatccttacaatcgcgtg
cggctgttgcatgccggtgttaaggtgagtggtgagaagcatgaatacctaatccctttc
aatcagttaatccaggttcgctgtaaacggggtatcgtctggggggagctggagttcgaa
ctgcctgatgaaaaagttgttcgcctgcatggtactgaatggcaggaaacacagcgtttt
taccattatctgctgcaatcctggcaacagtggagcgctgaaatgagtgaggtcagcgcg
ggggtattgcaagagcaggttgcgcatattcgtgtgattgaaggccaggataaatggttt
aaacgttctgacctgagccaactgcaacaacaaatccaccaggctttcggggcattgccg
ctgcctgttgcgcggctgaatgagtttgagcattgccgagaggattaccatttatgcctg
caatggttacaacacgggcaacgcagcgtcgcacagcgtaaccagcagtgggttgagcgt
atgctggaaagttatcatgattttttccaaaatatcgaagcttctccattgaatacttcg
caaagccgggcggtggtaaacggtgaggagacagtgttggtgctggcgggagcggggagc
ggtaaaacgtcggtattggtcgcacgggctgggtggttgctgcgccgccaagaggctgaa
cctgggcagatcctgttgctggcctttggccgtaacgcagcggcagaaatgaatgaacgc
attcaggaacgtttaggaaaggtagccattcaggctaagacattccacgcgttggcatta
caggtgattcaggaagggggccgcaaggagcctgttatcagtcagttggaaacagacagc
aaagcacggcgagcgctgttgatcaaccattggcagcaacaatgtagcgagaaaaaagcg
caggccaagggttggcgccaatggttgagtgaagagttggaatgggaagttcccgacggg
gatttctggcataacaaacatctggcggaacgtttggccgggcgtcttgagcgttggctg
ggtttgatgcgcacctatggcggcagtcaggcggctatgatcgaactggccgatgaagag
gttcgcgatttgttcgctaagcgcgtccgattaatggcaccgttgctgaaagcctggaaa
gccgcgttaaaggaagaaggggcggtagattttgccggattgattcatcaggcagtcaac
cttctggataaagggcgttttatcagcccgtggaaacatattctggtggatgagttccag
gatatctcgccacagcgtgcacaattactggcggcactgcgcaggcagaataaacagagc
tgcctgttcgctgttggtgatgattggcaggctatttaccgctttagtggtgcagagctg
gcgttgacaaccgcatttgcagcaaattttggtgagggtgcgcaatgtgcattggatacc
acctaccgtttcaatgatcgtattggagaagtggcgaacagttttattcagcagaatcca
catcaactgaaaaaaccgctaaacagcttaacgaaaggccataaaaagtcggttgttatt
ttgccacaggaacagttggaagcattgctggataaaataagtggttacgcgcaaccagaa
gaacgtattttggtgctggcgcgttaccaccacttgaagccgagtgcgttgtcaaaggcg
gcaacgcgttggccgaagctgaatattgagtttatgaccatacatgccagcaaggggcag
caggcagactatgtgattattgccgggttgcacgatggcaatgatggattcccagcgatc
gcccgtgagtcggtgcttgaagacgtgctattaccgccgccggaagattttccagacgct
gaggaacggcggttgctgtatgtcgcgctcacgcgtgccaaacaccaggtttggctctta
caggatcgtgaatcgccatcgatattcgttgaacagttgcaggatcttggtgtgccgtca
cagaaaaaaccctaa

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