Chania multitudinisentens: Z042_05885
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Entry
Z042_05885 CDS
T02987
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sfo
Chania multitudinisentens
Pathway
sfo03030
DNA replication
sfo03430
Mismatch repair
sfo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Z042_05885 (dnaE)
03430 Mismatch repair
Z042_05885 (dnaE)
03440 Homologous recombination
Z042_05885 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfo03032
]
Z042_05885 (dnaE)
03400 DNA repair and recombination proteins [BR:
sfo03400
]
Z042_05885 (dnaE)
Enzymes [BR:
sfo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Z042_05885 (dnaE)
DNA replication proteins [BR:
sfo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Z042_05885 (dnaE)
DNA repair and recombination proteins [BR:
sfo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Z042_05885 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AHG19195
UniProt:
W0LB37
LinkDB
All DBs
Position
2267263..2270751
Genome browser
AA seq
1162 aa
AA seq
DB search
MAEPRFIHLRVHSDYSMIDGLAKIGPLVKRAAALAMPALAITDFTNMCGLVKFYGSAHGA
GIKPIIGADFYVQSDVLGDELAHLTVLAANNAGYQNLTLLISHAYQRGYGAAGPVIDRDW
LIEHREGLILLSGARMGDVGKFLLRGNQVQVDQCLAFYQEHFPDSYYLELIRTGRPDEEN
YLHAVVALATERGLPVVATNDVRFLVEDEFDAHEIRVAIHDGFTLDDPKRPRNYTSQQFM
RSEDEMCELFADIPEALLNSVEIAKRCNVTIRLGEYFLPQFPTGEMTTEDFLVMKSKEGL
EERLEFLFPDPEVRAQRRPEYDKRLDVELRVINQMGFPGYFLIVMEFIQWSKDNNVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDLVIDHVAD
MYGREAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQ
LPEIYEADEEVRALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDAEGNHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALEMINARRAKTGLEPIDIAAIPLDDKPSFDML
QRSETTAVFQLESRGMKDLIKRLRPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDIQWQHESLKPVLEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKNPVEM
AKQRGGFEDGAKARGVDGELSVKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTDKVVGLVDECWRMGLKILPPDINSGQYHFHVNGEGEIVYGIGAIKG
VGEGPIEAIIEARNSGEQGYFKDLFDLCARSDIKKLNRRILEKLIMSGAFDRLGPHRAAL
MNSLGDALKAADQHAKAEATGQADMFGVLAEAPEQVEQSYANVPPWQEQVVLDGERETLG
LYLTGHPITQYLKEIERYAGDQRLKDMHPTERGKMTTAVGLVVAARVMVTKRGNRIGVCT
LDDRSGRLEVMLFTEALEKYQHLLEKDRILIATGQVSFDDFSGGLKMMVRELMDISEARE
KYARGLAISLTDRQIDDQLLNRLRQALEPHRSGTIPVHLYYQREDARARLRFGATWRVTP
TDRLLIDLRTLVGNEQVELEFD
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacctcgttttattcacctgcgcgttcatagtgactactccatgattgatgga
ttagccaagatcggcccattggtgaaaagagccgctgcgcttgccatgcccgctttggcg
atcactgatttcaccaatatgtgtggtttggtgaagttttacggtagtgcacatggtgcc
gggatcaaaccgattatcggtgcggatttttatgtgcagagtgatgtactgggcgatgag
ctggcgcaccttaccgtgctggcggccaataatgcaggctatcaaaacctgacgctgctg
atttcgcatgcctaccagcgtggttacggtgctgctgggccggtaattgatcgtgattgg
ttgattgagcaccgtgaagggctgatcctgctttcgggtgcgcggatgggggatgttggt
aaattcctgttgcgtggcaatcaggtgcaggttgatcaatgcctggcgttttatcaggaa
catttccccgacagctactatctggagctgatccgtactggtcgcccagacgaagagaac
tatctgcatgctgtcgtggcgctggcaactgagcgtggtctgccggtggtggccactaat
gacgtgcgttttttggtggaggatgaattcgacgcccatgaaatccgtgtggctatccac
gatggttttacgcttgacgatcctaaacgcccacgtaattacacctcacagcagtttatg
cgcagcgaagatgagatgtgtgagctgtttgctgatattccagaagctttgctcaatagc
gtcgagatcgccaagcgctgtaatgtcaccattcgccttggtgaatacttcctgccgcag
tttcctaccggtgaaatgaccaccgaagattttctggttatgaagtccaaagagggattg
gaagaacgccttgagttcctgttcccagacccggaagtgcgtgctcagcgccgcccggaa
tacgataagcgtctggatgttgaactacgcgtgatcaaccagatgggctttcctggttac
ttcctgatcgtgatggaatttattcagtggtcaaaggacaacaatgtgccggtggggccg
gggcgtggttctggggccggttcgttggtggcctatgcgctgaaaatcaccgatctagac
ccgctggaatttgacctgctgttcgaacgttttctgaacccggaacgggtgtcgatgcct
gactttgacgtcgatttctgcatggaaaaacgcgatttggtgatcgaccacgtcgcggat
atgtacggccgtgaagcggtatcgcagattatcacctttggtacgatggcggcgaaggcg
gtgatccgtgatgtggggcgcgtattgggccatccctatggttttgttgaccgcatctcc
aagctggtgccgcccgatccggggatgacgctggaaaaagcctttgctgcggaaccgcag
ctgccggagatatacgaggctgatgaagaggtcagggcgctgatcgatatggcgcgtaaa
ttagaaggagtgacgcgcaacgccggtaaacatgcgggtggggtggtgattgcgccaact
aaaatcaccgatttcgcgccgttgtattgtgatgctgaaggtaatcacccggttacccaa
ttcgataagaacgatgtggaatacgccgggctggtgaaattcgacttccttggcctgcgt
actctgaccatcatcgactgggccttggagatgatcaatgctcgccgcgccaagactggg
ctggagccgattgatatcgccgcgatcccgcttgatgacaaaccaagcttcgacatgctg
caacgttcggaaaccacggcagtattccagcttgaatcgcgtggcatgaaagatctgatc
aaacgcctgaggcctgactgtttcgaggatatgatcgcactggtggccctgttccgccct
ggcccattgcaatcgggcatggtggataacttcattgaccgtaaacatgggcgcgaagag
atttcttacccggacatccagtggcagcatgaatcactgaaaccggtgctggagccgacg
tatggcatcatcctgtaccaggaacaggtgatgcagattgctcaggtattggcaggctat
acattgggtggggcagacatgctgcgccgtgcgatggggaaaaagaacccggtcgaaatg
gccaaacagcgcggtgggtttgaagatggggccaaagcacgcggtgtcgatggggaactg
tcggtaaaaatttttgatttggtagaaaaattcgctggttatggcttcaataaatcgcac
tctgccgcttatgccttggtgtcatatcagacgctgtggctgaaagcccactatcctgcc
gagtttatggcggcggtaatgaccgctgatatggataacaccgacaaagtggtcgggctg
gtagatgaatgctggcgtatggggctgaaaatcttgccgccggacatcaacagcgggcaa
taccatttccatgttaacggcgaaggtgaaatcgtttacggcatcggtgcgattaaaggg
gtaggggaagggccgattgaggcaattattgaagcacgcaacagtggtgaacaagggtat
ttcaaagatttgttcgacctgtgcgcgcgctctgatatcaaaaagctgaaccgccggatt
ctggaaaaactgatcatgtctggggcatttgatcgcttgggcccacaccgtgccgcgctg
atgaattcgttaggcgatgcgttgaaagcggccgatcaacatgccaaagcggaagcgact
ggccaggctgatatgtttggcgtattggcggaagcgccggagcaggtggagcaatcttat
gctaatgtacccccgtggcaggaacaggtggtgctggatggcgaacgtgaaacgttaggg
ttataccttactggtcatccgattacccagtacctgaaagaaattgaacgttacgctggt
gaccagcgtttgaaagatatgcatccaacggagcggggtaagatgacaaccgccgtcggg
ctggtggttgccgctcgggttatggtcaccaaacggggtaaccgtatcggcgtttgtacg
ctggatgaccgttctggccgtctagaggttatgttattcaccgaggcgctggaaaaatat
cagcatttgttggaaaaagaccgtatcctgattgccactggacaggtcagctttgatgac
ttcagcggtgggcttaaaatgatggtccgcgaactgatggatatcagtgaagcccgtgaa
aaatacgcccgtgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttg
aaccgtctccgtcaggcgttggaacctcatcgctcggggacgattccagtgcatctctac
tatcaacgggaagatgcgcgagccaggctgcgttttggcgcaacctggcgcgtgacgccg
accgaccgcttgttgatagatttgcggaccttggtaggtaatgagcaggtggaactggaa
tttgactaa
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