Chania multitudinisentens: Z042_12785
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Entry
Z042_12785 CDS
T02987
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
sfo
Chania multitudinisentens
Pathway
sfo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Z042_12785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfo03019
]
Z042_12785
Enzymes [BR:
sfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Z042_12785
Messenger RNA biogenesis [BR:
sfo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Z042_12785
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_22
CCDC138_C
Motif
Other DBs
NCBI-ProteinID:
AHG20408
UniProt:
W0L9C7
LinkDB
All DBs
Position
733892..735181
Genome browser
AA seq
429 aa
AA seq
DB search
MSKTHLTEQKFSDFALHPLVLEALEKKGFRNCTPIQALALPLTLSGRDVAGQAQTGTGKT
LAFLASTFHYLLSHPAKEGRQTNQPRALIMAPTRELAVQIHSDAETLSQSTGMKLGLAYG
GDGYDKQLKVLESGVDILVGTTGRLIDYAKQNYIDLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPAVDQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIQEELFYPSN
EEKMRLLQTLIEEEWPDRCIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILD
DFTKGNLDILVATDVAARGLHIPLVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISLA
CEEYALNLPAIETYTGHSIPVSKYNSDALLTDLPAPKRLARPRGGNGPRRNSAPRRGGGA
PRNNRRRPG
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacacttgaccgaacagaagttttccgacttcgccctgcacccgttagtt
cttgaagcccttgaaaaaaaagggtttcgtaattgcacgcccatccaggcgttagcattg
ccgcttacgctctctgggcgtgacgttgcaggtcaggcgcaaaccggtaccggaaagacg
ctggcatttttagcgtctacttttcactatttgctgtcccacccggcgaaagaaggccgc
caaaccaatcagccgcgtgccttgatcatggcaccaacgcgtgaactggcggtacagatc
cattctgatgcagaaaccctttcacaatccaccggcatgaaactgggcctggcctatggc
ggtgatggttacgataagcagttgaaagtactggaaagcggtgtagatatcctggttggg
accacgggccgtttaatcgattacgccaaacagaactatatcgatctgggggcaattcag
gtcgtggtactggatgaagccgatcgtatgtacgatctgggctttatcaaagatatccgt
tggctattccgccgcatgcctgcggtcgatcaacgcctgaatatgttgttctctgccacc
ttatcttatcgcgttcgcgaattggcattcgagcagatgaacaacgccgaatatattgaa
gtggagccagaacaaaaaaccggccatcggattcaagaggaactcttctacccctccaat
gaagagaaaatgcgtctgttacagaccttgatcgaagaagagtggccagatcgctgcatc
attttcgccaatactaagcaccgctgtgaagacatttggggtcatctggctgccgatggt
caccgtgtaggcttgttgaccggcgatgtggcacagaaaaaacgcctgcgcattctggac
gatttcaccaaaggcaatctggatattctggtcgccaccgacgtcgccgcacgcggcctg
cacatcccactggtgactcacgtcttcaattacgatcttcctgacgactgcgaagattac
gtacaccgcattggccgtacaggccgcgcaggcgaaagcggccactccatcagcctggcc
tgtgaagagtatgccctcaatctgcctgccattgagacttataccggccacagcatccca
gtgagcaaatataacagcgatgcattgctaaccgatctacctgcgccaaaacgcctggca
cgtccacgcggtggcaacggcccacgccgtaattcggcgccacgtcgtggcggtggtgct
ccacgtaacaatcgtcggcgtccaggttaa
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