Chania multitudinisentens: Z042_12795
Help
Entry
Z042_12795 CDS
T02987
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sfo
Chania multitudinisentens
Pathway
sfo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Z042_12795 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfo03021
]
Z042_12795 (rho)
03019 Messenger RNA biogenesis [BR:
sfo03019
]
Z042_12795 (rho)
Transcription machinery [BR:
sfo03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Z042_12795 (rho)
Messenger RNA biogenesis [BR:
sfo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Z042_12795 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_22
OB_RNB
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AHG20410
UniProt:
W0LEQ5
LinkDB
All DBs
Position
complement(731687..732946)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSDLISLGESMGLENLARLRKQDIIFSILKQHAKSGEDIFGDGVLEILQD
GFGFLRSGDSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENARSKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLAAPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVIASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLARKIAEKRVFPAIDY
NRSGTRKEELLTTSEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDEFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgatctgattagtctcggcgaaagt
atggggttggaaaaccttgcccgcctgcgcaagcaggacattatcttctctatacttaag
caacatgcgaaaagcggggaagatatcttcggtgatggcgtgttggaaatattacaggac
gggtttggtttcctccgttctggagacagttcctacctcgccggccctgatgatatctac
gtttcccccagccaaattcgccgtttcaacctccgcacaggtgataccatttccggtaag
attcgtccgccaaaagaaggcgagcgttattttgctctgttgaaagtgaatgaagtcaac
tacgacaaaccggaaaatgcccgcagcaagatcctgttcgaaaacttgacgccgctgcac
gctaattctcgtttgcgcatggaacgcggcaatggctccactgaagatctgacggcacgc
gtgctggatctggcagcgccgattggccgtggtcaacgtggtttgatagtggcgccgccg
aaggctggtaagaccatgctgttgcaaaatattgcgcagagcatcgcttacaaccatcca
gactgtgtcctcatggtgttgctgattgacgaacgtccagaagaagtgaccgagatgcag
cgtctggtaaaaggtgaagttatcgcttctacctttgatgagccagcttcccgccacgtg
caggttgcagaaatggtgattgaaaaggctaaacgtctggttgaacataaaaaagacgtt
atcattctgcttgattcgatcacccgtttggcgcgagcttacaacaccgtggtgcctgct
tccggcaaggtgttgaccggtggtgtagatgccaacgccctgcatcgtccaaagcgtttc
ttcggtgctgcacgtaacgttgaggaagggggaagcctgaccatcatcgctactgcgctg
gtcgatacgggttccaaaatggacgaggttatctacgaagagtttaaaggtactggtaac
atggagttgcatctggcgcgtaaaatcgctgagaagcgtgtattccctgctatcgattac
aaccgttccggtactcgtaaagaagaattgctcacaacgtctgaagaactgcaaaaaatg
tggatcttgcgcaagatcattcatccgatgggcgagatcgatgcgatggagttcctcatt
aataaattggcaatgaccaaaaccaatgatgaattctttgacatgatgaaacgttcataa
DBGET
integrated database retrieval system
